RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 UTP14CQ5TAP6 766 aaKnown RBP5.22□□□□□ -1.57
HERC4-204ENST00000395198 PTPRHQ9HD43 1115 aa5.22□□□□□ -1.57
HERC4-204ENST00000395198 SUN2Q9UH99 717 aa5.22□□□□□ -1.57
HERC4-204ENST00000395198 PES1O00541 588 aaKnown RBP5.21□□□□□ -1.58
HERC4-204ENST00000395198 FECHP22830 423 aa5.21□□□□□ -1.58
HERC4-204ENST00000395198 HSD3B2P26439 372 aa5.21□□□□□ -1.58
HERC4-204ENST00000395198 NOL7Q9UMY1 257 aaKnown RBP5.21□□□□□ -1.58
HERC4-204ENST00000395198 SERPINB4P48594 390 aa5.21□□□□□ -1.58
HERC4-204ENST00000395198 RBL2Q08999 1139 aa5.21□□□□□ -1.58
HERC4-204ENST00000395198 DNAJC21Q5F1R6 531 aaKnown RBP5.21□□□□□ -1.58
HERC4-204ENST00000395198 CT47A1Q5JQC4 288 aaPredicted RBP5.21□□□□□ -1.58
HERC4-204ENST00000395198 PPP1R18Q6NYC8 613 aa5.21□□□□□ -1.58
HERC4-204ENST00000395198 ZCCHC8Q6NZY4 707 aaKnown RBP5.21□□□□□ -1.58
HERC4-204ENST00000395198 TAS1R3Q7RTX0 852 aa5.21□□□□□ -1.58
HERC4-204ENST00000395198 PCGF6Q9BYE7 350 aa5.21□□□□□ -1.58
HERC4-204ENST00000395198 ZHX3Q9H4I2 956 aa5.21□□□□□ -1.58
HERC4-204ENST00000395198 TSPAN7P41732 249 aa5.21□□□□□ -1.58
HERC4-204ENST00000395198 WASHC5Q12768 1159 aa5.21□□□□□ -1.58
HERC4-204ENST00000395198 TOMM20Q15388 145 aa5.21□□□□□ -1.58
HERC4-204ENST00000395198 ITGAEP38570 1179 aa5.2□□□□□ -1.58
HERC4-204ENST00000395198 ALKBH2Q6NS38 261 aa5.2□□□□□ -1.58
HERC4-204ENST00000395198 C16orf87Q6PH81 154 aa5.2□□□□□ -1.58
HERC4-204ENST00000395198 ANKRD13BQ86YJ7 626 aa5.2□□□□□ -1.58
HERC4-204ENST00000395198 SLF2Q8IX21 1173 aa5.2□□□□□ -1.58
HERC4-204ENST00000395198 SMAP1Q8IYB5 467 aaPredicted RBP5.2□□□□□ -1.58
HERC4-204ENST00000395198 RBM19Q9Y4C8 960 aaKnown RBP5.2□□□□□ -1.58
HERC4-204ENST00000395198 EID1Q9Y6B2 187 aa5.2□□□□□ -1.58
HERC4-204ENST00000395198 NCKAP5LQ9HCH0 1330 aa5.2□□□□□ -1.58
HERC4-204ENST00000395198 SOWAHDA6NJG2 315 aa5.2□□□□□ -1.58
HERC4-204ENST00000395198 BOLA2-SMG1P6H3BVE0 249 aa5.2□□□□□ -1.58
HERC4-204ENST00000395198 ECEL1O95672 775 aa5.2□□□□□ -1.58
HERC4-204ENST00000395198 TAF3Q5VWG9 929 aa5.2□□□□□ -1.58
HERC4-204ENST00000395198 GIGYF2Q6Y7W6 1299 aaKnown RBP5.2□□□□□ -1.58
HERC4-204ENST00000395198 RUNDC1Q96C34 613 aa5.2□□□□□ -1.58
HERC4-204ENST00000395198 APBA2Q99767 749 aa5.2□□□□□ -1.58
HERC4-204ENST00000395198 ZHX1Q9UKY1 873 aaPredicted RBP5.2□□□□□ -1.58
HERC4-204ENST00000395198 CCDC61Q9Y6R9 512 aa5.2□□□□□ -1.58
HERC4-204ENST00000395198 MRPL58Q14197 206 aaKnown RBP5.2□□□□□ -1.58
HERC4-204ENST00000395198 C16orf54Q6UWD8 224 aa5.2□□□□□ -1.58
HERC4-204ENST00000395198 FRS2Q8WU20 508 aa5.2□□□□□ -1.58
HERC4-204ENST00000395198 TMEM87BQ96K49 555 aa5.2□□□□□ -1.58
HERC4-204ENST00000395198 KMT5AQ9NQR1 393 aa5.2□□□□□ -1.58
HERC4-204ENST00000395198 INTUQ9ULD6 942 aa5.2□□□□□ -1.58
HERC4-204ENST00000395198 A6NJY4 79 aa5.2□□□□□ -1.58
HERC4-204ENST00000395198 HSP90AA1P07900 732 aaKnown RBP5.2□□□□□ -1.58
HERC4-204ENST00000395198 NDUFV2P19404 249 aa5.2□□□□□ -1.58
HERC4-204ENST00000395198 LMBRD2Q68DH5 695 aaPredicted RBP5.2□□□□□ -1.58
HERC4-204ENST00000395198 CHPFQ8IZ52 775 aa5.2□□□□□ -1.58
HERC4-204ENST00000395198 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.2□□□□□ -1.58
HERC4-204ENST00000395198 LILRB3O75022 631 aa5.19□□□□□ -1.58
HERC4-204ENST00000395198 DZIP3Q86Y13 1208 aaKnown RBP5.19□□□□□ -1.58
HERC4-204ENST00000395198 PPP1R12CQ9BZL4 782 aa5.19□□□□□ -1.58
HERC4-204ENST00000395198 TRPC1P48995 793 aa5.19□□□□□ -1.58
HERC4-204ENST00000395198 LRRC41Q15345 812 aa5.19□□□□□ -1.58
HERC4-204ENST00000395198 FAM210AQ96ND0 272 aa5.19□□□□□ -1.58
HERC4-204ENST00000395198 SERINC2Q96SA4 455 aa5.19□□□□□ -1.58
HERC4-204ENST00000395198 PPP1R37O75864 691 aa5.19□□□□□ -1.58
HERC4-204ENST00000395198 FOSP01100 380 aaPredicted RBP5.19□□□□□ -1.58
HERC4-204ENST00000395198 HOXC13P31276 330 aa5.19□□□□□ -1.58
HERC4-204ENST00000395198 ZNF132P52740 706 aa5.19□□□□□ -1.58
HERC4-204ENST00000395198 NAP1L1P55209 391 aaKnown RBP5.19□□□□□ -1.58
HERC4-204ENST00000395198 INO80DQ53TQ3 878 aaPredicted RBP5.19□□□□□ -1.58
HERC4-204ENST00000395198 CERKQ8TCT0 537 aa5.19□□□□□ -1.58
HERC4-204ENST00000395198 TBC1D20Q96BZ9 403 aa5.19□□□□□ -1.58
HERC4-204ENST00000395198 UCN2Q96RP3 112 aa5.19□□□□□ -1.58
HERC4-204ENST00000395198 PDGFDQ9GZP0 370 aaPredicted RBP5.19□□□□□ -1.58
HERC4-204ENST00000395198 MKS1Q9NXB0 559 aa5.19□□□□□ -1.58
HERC4-204ENST00000395198 FANCIQ9NVI1 1328 aa5.18□□□□□ -1.58
HERC4-204ENST00000395198 TBX3O15119 743 aa5.18□□□□□ -1.58
HERC4-204ENST00000395198 BPNT1O95861 308 aa5.18□□□□□ -1.58
HERC4-204ENST00000395198 PDCL3Q9H2J4 239 aa5.18□□□□□ -1.58
HERC4-204ENST00000395198 ACBD3Q9H3P7 528 aa5.18□□□□□ -1.58
HERC4-204ENST00000395198 SAFB2Q14151 953 aaKnown RBP eCLIP5.18□□□□□ -1.582e-6■■■■□ 19.5
HERC4-204ENST00000395198 COL19A1Q14993 1142 aa5.18□□□□□ -1.58
HERC4-204ENST00000395198 DNTTIP2Q5QJE6 756 aaKnown RBP5.18□□□□□ -1.58
HERC4-204ENST00000395198 ZNF467Q7Z7K2 595 aaPredicted RBP5.18□□□□□ -1.58
HERC4-204ENST00000395198 FAM43AQ8N2R8 423 aa5.18□□□□□ -1.58
HERC4-204ENST00000395198 CHCHD4Q8N4Q1 142 aa5.18□□□□□ -1.58
HERC4-204ENST00000395198 PHC3Q8NDX5 983 aa5.18□□□□□ -1.58
HERC4-204ENST00000395198 NAP1L4Q99733 375 aaKnown RBP5.18□□□□□ -1.58
HERC4-204ENST00000395198 FAM126AQ9BYI3 521 aaPredicted RBP5.18□□□□□ -1.58
HERC4-204ENST00000395198 DNAJC25Q9H1X3 360 aa5.18□□□□□ -1.58
HERC4-204ENST00000395198 GINM1Q9NU53 330 aa5.18□□□□□ -1.58
HERC4-204ENST00000395198 TMCC3Q9ULS5 477 aa5.18□□□□□ -1.58
HERC4-204ENST00000395198 ATP2B1P20020 1258 aa5.18□□□□□ -1.58
HERC4-204ENST00000395198 RBM5P52756 815 aaKnown RBP eCLIP5.18□□□□□ -1.58
HERC4-204ENST00000395198 RNF187Q5TA31 235 aaPredicted RBP5.18□□□□□ -1.58
HERC4-204ENST00000395198 UHMK1Q8TAS1 419 aaKnown RBP5.18□□□□□ -1.58
HERC4-204ENST00000395198 ACAD8Q9UKU7 415 aa5.18□□□□□ -1.58
HERC4-204ENST00000395198 CEP83Q9Y592 693 aa5.18□□□□□ -1.58
HERC4-204ENST00000395198 WDR97A6NE52 1622 aa5.18□□□□□ -1.58
HERC4-204ENST00000395198 WASHC2CQ9Y4E1 1318 aa5.18□□□□□ -1.58
HERC4-204ENST00000395198 PALM3A6NDB9 673 aaPredicted RBP5.17□□□□□ -1.58
HERC4-204ENST00000395198 ENPP1P22413 925 aa5.17□□□□□ -1.58
HERC4-204ENST00000395198 PPP2R5BQ15173 497 aa5.17□□□□□ -1.58
HERC4-204ENST00000395198 TMEM95Q3KNT9 176 aa5.17□□□□□ -1.58
HERC4-204ENST00000395198 CDC37L1Q7L3B6 337 aa5.17□□□□□ -1.58
HERC4-204ENST00000395198 LMNTD2Q8IXW0 634 aa5.17□□□□□ -1.58
HERC4-204ENST00000395198 MIER1Q8N108 512 aa5.17□□□□□ -1.58
HERC4-204ENST00000395198 KANSL2Q9H9L4 492 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms