RNA–Protein interactions for RNA: ENST00000395065.7

NXF3-201, Transcript of nuclear RNA export factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF3, Length 1,938 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-201ENST00000395065 ANAPC15P60006 121 aa7.63□□□□□ -1.19
NXF3-201ENST00000395065 USP48Q86UV5 1035 aa7.63□□□□□ -1.19
NXF3-201ENST00000395065 TSPYL6Q8N831 410 aa7.63□□□□□ -1.19
NXF3-201ENST00000395065 IFT57Q9NWB7 429 aa7.63□□□□□ -1.19
NXF3-201ENST00000395065 STK26Q9P289 416 aa7.63□□□□□ -1.19
NXF3-201ENST00000395065 CLTCQ00610 1675 aaKnown RBP7.63□□□□□ -1.19
NXF3-201ENST00000395065 A0A1W2PP64 1363 aa7.63□□□□□ -1.19
NXF3-201ENST00000395065 PTPRMP28827 1452 aa7.63□□□□□ -1.19
NXF3-201ENST00000395065 LRRC7Q96NW7 1537 aa7.63□□□□□ -1.19
NXF3-201ENST00000395065 SPDYE4A6NLX3 237 aa7.62□□□□□ -1.19
NXF3-201ENST00000395065 FAM177BA6PVY3 158 aa7.62□□□□□ -1.19
NXF3-201ENST00000395065 FYB1O15117 783 aa7.62□□□□□ -1.19
NXF3-201ENST00000395065 NEK4P51957 841 aa7.62□□□□□ -1.19
NXF3-201ENST00000395065 GNAI1P63096 354 aa7.62□□□□□ -1.19
NXF3-201ENST00000395065 C17orf53Q8N3J3 647 aaPredicted RBP7.62□□□□□ -1.19
NXF3-201ENST00000395065 OTUD7AQ8TE49 926 aaPredicted RBP7.62□□□□□ -1.19
NXF3-201ENST00000395065 KCNF1Q9H3M0 494 aa7.62□□□□□ -1.19
NXF3-201ENST00000395065 CTNNA3Q9UI47 895 aa7.62□□□□□ -1.19
NXF3-201ENST00000395065 RPAP1Q9BWH6 1393 aaPredicted RBP7.62□□□□□ -1.19
NXF3-201ENST00000395065 EPB41L2O43491 1005 aaKnown RBP7.62□□□□□ -1.19
NXF3-201ENST00000395065 CHAF1AQ13111 956 aaPredicted RBP7.62□□□□□ -1.19
NXF3-201ENST00000395065 KIF20BQ96Q89 1820 aa7.62□□□□□ -1.19
NXF3-201ENST00000395065 TUBGCP6Q96RT7 1819 aa7.62□□□□□ -1.19
NXF3-201ENST00000395065 RGS12O14924 1447 aa7.62□□□□□ -1.19
NXF3-201ENST00000395065 ZFYVE9O95405 1425 aa7.62□□□□□ -1.19
NXF3-201ENST00000395065 SLFN14P0C7P3 912 aa7.61□□□□□ -1.19
NXF3-201ENST00000395065 HCLS1P14317 486 aaPredicted RBP7.61□□□□□ -1.19
NXF3-201ENST00000395065 PDE4CQ08493 712 aa7.61□□□□□ -1.19
NXF3-201ENST00000395065 NCBP1Q09161 790 aaKnown RBP7.61□□□□□ -1.19
NXF3-201ENST00000395065 NFE2L2Q16236 605 aa7.61□□□□□ -1.19
NXF3-201ENST00000395065 CEP85Q6P2H3 762 aa7.61□□□□□ -1.19
NXF3-201ENST00000395065 DDX41Q9UJV9 622 aaKnown RBP7.61□□□□□ -1.19
NXF3-201ENST00000395065 PYCARDQ9ULZ3 195 aa7.61□□□□□ -1.19
NXF3-201ENST00000395065 MORC2Q9Y6X9 1032 aaPredicted RBP7.61□□□□□ -1.19
NXF3-201ENST00000395065 WDR33Q9C0J8 1336 aaKnown RBP7.61□□□□□ -1.19
NXF3-201ENST00000395065 AP5Z1O43299 807 aa7.6□□□□□ -1.19
NXF3-201ENST00000395065 SMARCA5O60264 1052 aaPredicted RBP7.6□□□□□ -1.19
NXF3-201ENST00000395065 UBE2HP62256 183 aa7.6□□□□□ -1.19
NXF3-201ENST00000395065 SRPK2P78362 688 aaKnown RBP7.6□□□□□ -1.19
NXF3-201ENST00000395065 TWISTNBQ3B726 338 aaPredicted RBP7.6□□□□□ -1.19
NXF3-201ENST00000395065 FOXD4L5Q5VV16 416 aaPredicted RBP7.6□□□□□ -1.19
NXF3-201ENST00000395065 FOXD4L4Q8WXT5 416 aaPredicted RBP7.6□□□□□ -1.19
NXF3-201ENST00000395065 GGNBP2Q9H3C7 697 aa7.6□□□□□ -1.19
NXF3-201ENST00000395065 MBIPQ9NS73 344 aa7.6□□□□□ -1.19
NXF3-201ENST00000395065 SLC52A1Q9NWF4 448 aa7.6□□□□□ -1.19
NXF3-201ENST00000395065 ATAD2Q6PL18 1390 aa7.6□□□□□ -1.19
NXF3-201ENST00000395065 SSH2Q76I76 1423 aa7.6□□□□□ -1.19
NXF3-201ENST00000395065 CD163L1Q9NR16 1453 aa7.6□□□□□ -1.19
NXF3-201ENST00000395065 ALKQ9UM73 1620 aa7.6□□□□□ -1.19
NXF3-201ENST00000395065 ARHGEF40Q8TER5 1519 aa7.6□□□□□ -1.19
NXF3-201ENST00000395065 YTHDC2Q9H6S0 1430 aaKnown RBP7.6□□□□□ -1.19
NXF3-201ENST00000395065 MINK1Q8N4C8 1332 aaPredicted RBP7.6□□□□□ -1.19
NXF3-201ENST00000395065 SALL3Q9BXA9 1300 aa7.6□□□□□ -1.19
NXF3-201ENST00000395065 HSPA2P54652 639 aa7.6□□□□□ -1.19
NXF3-201ENST00000395065 FAM193AP78312 1265 aa7.6□□□□□ -1.19
NXF3-201ENST00000395065 SLC20A2Q08357 652 aa7.6□□□□□ -1.19
NXF3-201ENST00000395065 FBXO31Q5XUX0 539 aaPredicted RBP7.6□□□□□ -1.19
NXF3-201ENST00000395065 MPNDQ8N594 471 aa7.6□□□□□ -1.19
NXF3-201ENST00000395065 GDPD2Q9HCC8 539 aa7.6□□□□□ -1.19
NXF3-201ENST00000395065 FAM53CQ9NYF3 392 aa7.6□□□□□ -1.19
NXF3-201ENST00000395065 CPSF1Q10570 1443 aaKnown RBP7.59□□□□□ -1.19
NXF3-201ENST00000395065 PRKAR2BP31323 418 aa7.59□□□□□ -1.19
NXF3-201ENST00000395065 PDE1AP54750 535 aa7.59□□□□□ -1.19
NXF3-201ENST00000395065 MLECQ14165 292 aa7.59□□□□□ -1.19
NXF3-201ENST00000395065 FBXO41Q8TF61 875 aa7.59□□□□□ -1.19
NXF3-201ENST00000395065 PRAM1Q96QH2 718 aa7.59□□□□□ -1.19
NXF3-201ENST00000395065 ESYT1Q9BSJ8 1104 aa7.59□□□□□ -1.19
NXF3-201ENST00000395065 SETD1AO15047 1707 aaKnown RBP7.59□□□□□ -1.19
NXF3-201ENST00000395065 KIAA0232Q92628 1395 aa7.58□□□□□ -1.2
NXF3-201ENST00000395065 ZBTB7CA1YPR0 619 aa7.58□□□□□ -1.2
NXF3-201ENST00000395065 SMTNL1A8MU46 457 aa7.58□□□□□ -1.2
NXF3-201ENST00000395065 GOLGA6L6A8MZA4 724 aa7.58□□□□□ -1.2
NXF3-201ENST00000395065 TULP1O00294 542 aaPredicted RBP7.58□□□□□ -1.2
NXF3-201ENST00000395065 C8orf58Q8NAV2 365 aa7.58□□□□□ -1.2
NXF3-201ENST00000395065 SRCIN1Q9C0H9 1055 aa7.58□□□□□ -1.2
NXF3-201ENST00000395065 CGNQ9P2M7 1197 aaKnown RBP7.58□□□□□ -1.2
NXF3-201ENST00000395065 PALD1Q9ULE6 856 aa7.58□□□□□ -1.2
NXF3-201ENST00000395065 IGSF3O75054 1194 aa7.58□□□□□ -1.2
NXF3-201ENST00000395065 MCCP23508 829 aa7.58□□□□□ -1.2
NXF3-201ENST00000395065 TERF2Q15554 542 aa7.58□□□□□ -1.2
NXF3-201ENST00000395065 ZNF771Q7L3S4 317 aaPredicted RBP7.58□□□□□ -1.2
NXF3-201ENST00000395065 POTEDQ86YR6 584 aa7.58□□□□□ -1.2
NXF3-201ENST00000395065 PHACTR3Q96KR7 559 aa7.58□□□□□ -1.2
NXF3-201ENST00000395065 ZSCAN22P10073 491 aaPredicted RBP7.57□□□□□ -1.2
NXF3-201ENST00000395065 CREBRFQ8IUR6 639 aa7.57□□□□□ -1.2
NXF3-201ENST00000395065 IPO4Q8TEX9 1081 aaKnown RBP7.57□□□□□ -1.2
NXF3-201ENST00000395065 TERF2IPQ9NYB0 399 aa7.57□□□□□ -1.2
NXF3-201ENST00000395065 PAXBP1Q9Y5B6 917 aa7.57□□□□□ -1.2
NXF3-201ENST00000395065 ADAMTSL3P82987 1691 aa7.57□□□□□ -1.2
NXF3-201ENST00000395065 DLG5Q8TDM6 1919 aa7.57□□□□□ -1.2
NXF3-201ENST00000395065 CCDC66A2RUB6 948 aa7.56□□□□□ -1.2
NXF3-201ENST00000395065 ELL2O00472 640 aaPredicted RBP7.56□□□□□ -1.2
NXF3-201ENST00000395065 KIF18AQ8NI77 898 aa7.56□□□□□ -1.2
NXF3-201ENST00000395065 THUMPD2Q9BTF0 503 aaKnown RBP7.56□□□□□ -1.2
NXF3-201ENST00000395065 NAP1L2Q9ULW6 460 aaPredicted RBP7.56□□□□□ -1.2
NXF3-201ENST00000395065 CNPY2Q9Y2B0 182 aa7.56□□□□□ -1.2
NXF3-201ENST00000395065 LMTK3Q96Q04 1460 aa7.56□□□□□ -1.2
NXF3-201ENST00000395065 TULP2O00295 520 aa7.56□□□□□ -1.2
NXF3-201ENST00000395065 CHMLP26374 656 aa7.56□□□□□ -1.2
NXF3-201ENST00000395065 IRX5P78411 483 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms