RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 SMARCC1Q92922 1105 aaPredicted RBP26.38■■□□□ 1.81
SNCA-203ENST00000394986 CCNL1Q9UK58 526 aaPredicted RBP26.38■■□□□ 1.81
SNCA-203ENST00000394986 PSDA5PKW4 1024 aaPredicted RBP26.37■■□□□ 1.81
SNCA-203ENST00000394986 LY75O60449 1722 aa26.37■■□□□ 1.81
SNCA-203ENST00000394986 CEMIPQ8WUJ3 1361 aa26.35■■□□□ 1.81
SNCA-203ENST00000394986 R3HDM1Q15032 1099 aaKnown RBP26.35■■□□□ 1.81
SNCA-203ENST00000394986 SLC27A3Q5K4L6 730 aa26.35■■□□□ 1.81
SNCA-203ENST00000394986 RTF1Q92541 710 aaKnown RBP26.35■■□□□ 1.81
SNCA-203ENST00000394986 RUNDC1Q96C34 613 aa26.35■■□□□ 1.81
SNCA-203ENST00000394986 PNISRQ8TF01 805 aaKnown RBP26.34■■□□□ 1.81
SNCA-203ENST00000394986 RRP7AQ9Y3A4 280 aaKnown RBP26.34■■□□□ 1.81
SNCA-203ENST00000394986 PAPPAQ13219 1627 aa26.33■■□□□ 1.81
SNCA-203ENST00000394986 TEFQ10587 303 aa26.33■■□□□ 1.81
SNCA-203ENST00000394986 SLC39A6Q13433 755 aa26.32■■□□□ 1.8
SNCA-203ENST00000394986 NBPF14Q5TI25 921 aa26.32■■□□□ 1.8
SNCA-203ENST00000394986 DIEXFQ68CQ4 756 aaKnown RBP26.32■■□□□ 1.8
SNCA-203ENST00000394986 VIRMAQ69YN4 1812 aaKnown RBP26.32■■□□□ 1.8
SNCA-203ENST00000394986 LOC102724428A0A0B4J2F2 783 aa26.31■■□□□ 1.8
SNCA-203ENST00000394986 SIK1P57059 783 aa26.31■■□□□ 1.8
SNCA-203ENST00000394986 RBM42Q9BTD8 480 aaKnown RBP26.31■■□□□ 1.8
SNCA-203ENST00000394986 TMPOP42166 694 aaKnown RBP26.31■■□□□ 1.8
SNCA-203ENST00000394986 ZNF827Q17R98 1081 aa26.31■■□□□ 1.8
SNCA-203ENST00000394986 THUMPD2Q9BTF0 503 aaKnown RBP26.31■■□□□ 1.8
SNCA-203ENST00000394986 HTATSF1O43719 755 aaKnown RBP26.3■■□□□ 1.8
SNCA-203ENST00000394986 PTCD1O75127 700 aaKnown RBP26.3■■□□□ 1.8
SNCA-203ENST00000394986 RIPK4P57078 832 aa26.3■■□□□ 1.8
SNCA-203ENST00000394986 NEUROD2Q15784 382 aa26.3■■□□□ 1.8
SNCA-203ENST00000394986 SLC4A9Q96Q91 983 aa26.3■■□□□ 1.8
SNCA-203ENST00000394986 STK32BQ9NY57 414 aa26.29■■□□□ 1.8
SNCA-203ENST00000394986 ITPK1Q13572 414 aa26.28■■□□□ 1.8
SNCA-203ENST00000394986 DLG5Q8TDM6 1919 aa26.28■■□□□ 1.8
SNCA-203ENST00000394986 ATP6V1AP38606 617 aa26.27■■□□□ 1.8
SNCA-203ENST00000394986 SLC15A2Q16348 729 aa26.27■■□□□ 1.8
SNCA-203ENST00000394986 SENP3-EIF4A1A0A087X0R7 540 aa26.26■■□□□ 1.79
SNCA-203ENST00000394986 AKT1S1Q96B36 256 aa26.26■■□□□ 1.79
SNCA-203ENST00000394986 APAF1O14727 1248 aa26.25■■□□□ 1.79
SNCA-203ENST00000394986 LINC00116Q8NCU8 138 aa26.25■■□□□ 1.79
SNCA-203ENST00000394986 SIPA1L3O60292 1781 aaPredicted RBP26.25■■□□□ 1.79
SNCA-203ENST00000394986 KCPQ6ZWJ8 1503 aa26.24■■□□□ 1.79
SNCA-203ENST00000394986 C5P01031 1676 aa26.24■■□□□ 1.79
SNCA-203ENST00000394986 FAM9BQ8IZU0 186 aa26.23■■□□□ 1.79
SNCA-203ENST00000394986 BTBD11A6QL63 1104 aa26.22■■□□□ 1.79
SNCA-203ENST00000394986 KCNQ3O43525 872 aa26.22■■□□□ 1.79
SNCA-203ENST00000394986 PDGFDQ9GZP0 370 aaPredicted RBP26.22■■□□□ 1.79
SNCA-203ENST00000394986 ZNF790Q6PG37 636 aa26.22■■□□□ 1.79
SNCA-203ENST00000394986 TTC5Q8N0Z6 440 aa26.22■■□□□ 1.79
SNCA-203ENST00000394986 TRIM35Q9UPQ4 493 aa26.22■■□□□ 1.79
SNCA-203ENST00000394986 MIS18AQ9NYP9 233 aa26.21■■□□□ 1.79
SNCA-203ENST00000394986 TAF1LQ8IZX4 1826 aa26.19■■□□□ 1.78
SNCA-203ENST00000394986 LMOD3Q0VAK6 560 aa26.19■■□□□ 1.78
SNCA-203ENST00000394986 TAF7Q15545 349 aaPredicted RBP26.19■■□□□ 1.78
SNCA-203ENST00000394986 MIER1Q8N108 512 aa26.19■■□□□ 1.78
SNCA-203ENST00000394986 ZNF496Q96IT1 587 aaPredicted RBP26.19■■□□□ 1.78
SNCA-203ENST00000394986 TFCP2L1Q9NZI6 479 aa26.19■■□□□ 1.78
SNCA-203ENST00000394986 C4BP0C0L5 1744 aa26.19■■□□□ 1.78
SNCA-203ENST00000394986 SMIM5Q71RC9 77 aa26.17■■□□□ 1.78
SNCA-203ENST00000394986 DNAJC10Q8IXB1 793 aa26.17■■□□□ 1.78
SNCA-203ENST00000394986 UBR2Q8IWV8 1755 aa26.17■■□□□ 1.78
SNCA-203ENST00000394986 TJP1Q07157 1748 aa26.17■■□□□ 1.78
SNCA-203ENST00000394986 AMIGO3Q86WK7 504 aa26.16■■□□□ 1.78
SNCA-203ENST00000394986 AK7Q96M32 723 aa26.16■■□□□ 1.78
SNCA-203ENST00000394986 ZNF831Q5JPB2 1677 aa26.16■■□□□ 1.78
SNCA-203ENST00000394986 PNPLA7Q6ZV29 1317 aa26.16■■□□□ 1.78
SNCA-203ENST00000394986 CCER2I3L3R5 266 aa26.15■■□□□ 1.78
SNCA-203ENST00000394986 TUBGCP6Q96RT7 1819 aa26.14■■□□□ 1.78
SNCA-203ENST00000394986 HEG1Q9ULI3 1381 aa26.13■■□□□ 1.77
SNCA-203ENST00000394986 COL5A3P25940 1745 aaPredicted RBP26.13■■□□□ 1.77
SNCA-203ENST00000394986 GNPATO15228 680 aa26.13■■□□□ 1.77
SNCA-203ENST00000394986 FMNL2Q96PY5 1086 aa26.13■■□□□ 1.77
SNCA-203ENST00000394986 CASZ1Q86V15 1759 aa26.13■■□□□ 1.77
SNCA-203ENST00000394986 CICQ96RK0 1608 aaPredicted RBP26.12■■□□□ 1.77
SNCA-203ENST00000394986 PHF14O94880 888 aa26.12■■□□□ 1.77
SNCA-203ENST00000394986 CRKLP46109 303 aaKnown RBP26.11■■□□□ 1.77
SNCA-203ENST00000394986 VSIG10Q8N0Z9 540 aa26.11■■□□□ 1.77
SNCA-203ENST00000394986 CNTNAP4Q9C0A0 1308 aa26.1■■□□□ 1.77
SNCA-203ENST00000394986 PRAMEF22A3QJZ6 481 aa26.1■■□□□ 1.77
SNCA-203ENST00000394986 TSPYL4Q9UJ04 414 aa26.1■■□□□ 1.77
SNCA-203ENST00000394986 ZBTB7AO95365 584 aa26.09■■□□□ 1.77
SNCA-203ENST00000394986 CYP19A1P11511 503 aaPredicted RBP26.09■■□□□ 1.77
SNCA-203ENST00000394986 HMGB2P26583 209 aaKnown RBP26.09■■□□□ 1.77
SNCA-203ENST00000394986 COL23A1Q86Y22 540 aaPredicted RBP26.09■■□□□ 1.77
SNCA-203ENST00000394986 LAS1LQ9Y4W2 734 aaKnown RBP26.09■■□□□ 1.77
SNCA-203ENST00000394986 KDM3BQ7LBC6 1761 aa26.09■■□□□ 1.77
SNCA-203ENST00000394986 MSH5O43196 834 aa26.08■■□□□ 1.77
SNCA-203ENST00000394986 SALL2Q9Y467 1007 aaPredicted RBP26.08■■□□□ 1.77
SNCA-203ENST00000394986 RC3H1Q5TC82 1133 aaKnown RBP26.07■■□□□ 1.76
SNCA-203ENST00000394986 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.06■■□□□ 1.76
SNCA-203ENST00000394986 INTS5Q6P9B9 1019 aaKnown RBP26.06■■□□□ 1.76
SNCA-203ENST00000394986 QSER1Q2KHR3 1735 aa26.06■■□□□ 1.76
SNCA-203ENST00000394986 UBR3Q6ZT12 1888 aa26.06■■□□□ 1.76
SNCA-203ENST00000394986 EIF4A1P60842 406 aaKnown RBP26.05■■□□□ 1.76
SNCA-203ENST00000394986 CCDC87Q9NVE4 849 aa26.05■■□□□ 1.76
SNCA-203ENST00000394986 SSFA2P28290 1259 aa26.05■■□□□ 1.76
SNCA-203ENST00000394986 ATF5Q9Y2D1 282 aaPredicted RBP26.05■■□□□ 1.76
SNCA-203ENST00000394986 ZBTB1Q9Y2K1 713 aa26.05■■□□□ 1.76
SNCA-203ENST00000394986 RTCBQ9Y3I0 505 aaKnown RBP26.05■■□□□ 1.76
SNCA-203ENST00000394986 MYH14Q7Z406 1995 aaKnown RBP26.03■■□□□ 1.76
SNCA-203ENST00000394986 RPS6KA4O75676 772 aa26.03■■□□□ 1.76
SNCA-203ENST00000394986 STARD3NLO95772 234 aa26.03■■□□□ 1.76
SNCA-203ENST00000394986 SNRPA1P09661 255 aaKnown RBP26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms