RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 NPHP4O75161 1426 aaPredicted RBP19.21■□□□□ 0.67
CPSF7-202ENST00000394888 BRPF3Q9ULD4 1205 aa19.2■□□□□ 0.66
CPSF7-202ENST00000394888 PNMA6EA0A0J9YXQ4 647 aa19.2■□□□□ 0.66
CPSF7-202ENST00000394888 SDSP20132 328 aa19.2■□□□□ 0.66
CPSF7-202ENST00000394888 FLIIQ13045 1269 aa19.19■□□□□ 0.66
CPSF7-202ENST00000394888 USP26Q9BXU7 913 aa19.19■□□□□ 0.66
CPSF7-202ENST00000394888 LGR6Q9HBX8 967 aa19.19■□□□□ 0.66
CPSF7-202ENST00000394888 CDC45O75419 566 aa19.18■□□□□ 0.66
CPSF7-202ENST00000394888 BABAM1Q9NWV8 329 aa19.18■□□□□ 0.66
CPSF7-202ENST00000394888 PKD1L3Q7Z443 1732 aa19.18■□□□□ 0.66
CPSF7-202ENST00000394888 MCM4P33991 863 aa19.17■□□□□ 0.66
CPSF7-202ENST00000394888 IBTKQ9P2D0 1353 aaPredicted RBP19.17■□□□□ 0.66
CPSF7-202ENST00000394888 KCNQ3O43525 872 aa19.17■□□□□ 0.66
CPSF7-202ENST00000394888 OVOS2A0A0G2JMS6 1433 aa19.17■□□□□ 0.66
CPSF7-202ENST00000394888 USP44Q9H0E7 712 aa19.16■□□□□ 0.66
CPSF7-202ENST00000394888 CCT4P50991 539 aaKnown RBP19.16■□□□□ 0.66
CPSF7-202ENST00000394888 PHAXQ9H814 394 aaKnown RBP19.16■□□□□ 0.66
CPSF7-202ENST00000394888 SOS1Q07889 1333 aaPredicted RBP19.16■□□□□ 0.66
CPSF7-202ENST00000394888 RTF1Q92541 710 aaKnown RBP19.15■□□□□ 0.66
CPSF7-202ENST00000394888 ORAI2Q96SN7 254 aa19.15■□□□□ 0.66
CPSF7-202ENST00000394888 TAF7Q15545 349 aaPredicted RBP19.15■□□□□ 0.66
CPSF7-202ENST00000394888 HAP1P54257 671 aaPredicted RBP19.15■□□□□ 0.66
CPSF7-202ENST00000394888 EIF4A1P60842 406 aaKnown RBP19.15■□□□□ 0.66
CPSF7-202ENST00000394888 ANKLE2Q86XL3 938 aa19.15■□□□□ 0.66
CPSF7-202ENST00000394888 LRRC59Q96AG4 307 aaKnown RBP19.15■□□□□ 0.66
CPSF7-202ENST00000394888 CHMP5Q9NZZ3 219 aa19.15■□□□□ 0.66
CPSF7-202ENST00000394888 ADCY9O60503 1353 aa19.14■□□□□ 0.65
CPSF7-202ENST00000394888 FSD2A1L4K1 749 aa19.14■□□□□ 0.65
CPSF7-202ENST00000394888 AXIN2Q9Y2T1 843 aa19.14■□□□□ 0.65
CPSF7-202ENST00000394888 ARHGEF25Q86VW2 580 aa19.13■□□□□ 0.65
CPSF7-202ENST00000394888 LTV1Q96GA3 475 aaPredicted RBP19.13■□□□□ 0.65
CPSF7-202ENST00000394888 RAB3GAP1Q15042 981 aa19.13■□□□□ 0.65
CPSF7-202ENST00000394888 C1orf167Q5SNV9 1468 aa19.13■□□□□ 0.65
CPSF7-202ENST00000394888 PDE1AP54750 535 aa19.12■□□□□ 0.65
CPSF7-202ENST00000394888 NECTIN2Q92692 538 aa19.12■□□□□ 0.65
CPSF7-202ENST00000394888 ABCC6O95255 1503 aa19.12■□□□□ 0.65
CPSF7-202ENST00000394888 SHANK3Q9BYB0 1731 aa19.12■□□□□ 0.65
CPSF7-202ENST00000394888 IL25Q9H293 177 aa19.12■□□□□ 0.65
CPSF7-202ENST00000394888 TSHZ3Q63HK5 1081 aa19.11■□□□□ 0.65
CPSF7-202ENST00000394888 ATP8B2P98198 1209 aa19.11■□□□□ 0.65
CPSF7-202ENST00000394888 CCDC30Q5VVM6 783 aa19.11■□□□□ 0.65
CPSF7-202ENST00000394888 SLC4A10Q6U841 1118 aa19.11■□□□□ 0.65
CPSF7-202ENST00000394888 PARP4Q9UKK3 1724 aaKnown RBP19.1■□□□□ 0.65
CPSF7-202ENST00000394888 TNPO1Q92973 898 aaKnown RBP19.1■□□□□ 0.65
CPSF7-202ENST00000394888 EXOC6BQ9Y2D4 811 aa19.1■□□□□ 0.65
CPSF7-202ENST00000394888 POLA2Q14181 598 aa19.1■□□□□ 0.65
CPSF7-202ENST00000394888 HSCBQ8IWL3 235 aa19.1■□□□□ 0.65
CPSF7-202ENST00000394888 CLEC17AQ6ZS10 378 aa19.09■□□□□ 0.65
CPSF7-202ENST00000394888 IL17RAQ96F46 866 aa19.09■□□□□ 0.65
CPSF7-202ENST00000394888 K7ELQ4 463 aaPredicted RBP19.09■□□□□ 0.65
CPSF7-202ENST00000394888 CYP2E1P05181 493 aaPredicted RBP19.09■□□□□ 0.65
CPSF7-202ENST00000394888 MRC1P22897 1456 aa19.09■□□□□ 0.65
CPSF7-202ENST00000394888 GNAI2P04899 355 aa19.09■□□□□ 0.65
CPSF7-202ENST00000394888 UNC5CLQ8IV45 518 aa19.09■□□□□ 0.65
CPSF7-202ENST00000394888 ESCO1Q5FWF5 840 aa19.08■□□□□ 0.65
CPSF7-202ENST00000394888 STAP2Q9UGK3 403 aa19.08■□□□□ 0.64
CPSF7-202ENST00000394888 LRRFIP2Q9Y608 721 aaKnown RBP19.08■□□□□ 0.64
CPSF7-202ENST00000394888 KDM6AO15550 1401 aaPredicted RBP19.08■□□□□ 0.64
CPSF7-202ENST00000394888 UBR2Q8IWV8 1755 aa19.07■□□□□ 0.64
CPSF7-202ENST00000394888 SSH3Q8TE77 659 aa19.07■□□□□ 0.64
CPSF7-202ENST00000394888 ABCA3Q99758 1704 aa19.07■□□□□ 0.64
CPSF7-202ENST00000394888 LAMB4A4D0S4 1761 aa19.07■□□□□ 0.64
CPSF7-202ENST00000394888 ARFGEF2Q9Y6D5 1785 aa19.07■□□□□ 0.64
CPSF7-202ENST00000394888 APBB1O00213 710 aa19.07■□□□□ 0.64
CPSF7-202ENST00000394888 GCP02774 474 aa19.07■□□□□ 0.64
CPSF7-202ENST00000394888 BEND3Q5T5X7 828 aa19.07■□□□□ 0.64
CPSF7-202ENST00000394888 PRAMEF22A3QJZ6 481 aa19.06■□□□□ 0.64
CPSF7-202ENST00000394888 XPCQ01831 940 aaPredicted RBP19.06■□□□□ 0.64
CPSF7-202ENST00000394888 FKBP5Q13451 457 aaPredicted RBP19.06■□□□□ 0.64
CPSF7-202ENST00000394888 PAPPAQ13219 1627 aa19.05■□□□□ 0.64
CPSF7-202ENST00000394888 CHPF2Q9P2E5 772 aa19.05■□□□□ 0.64
CPSF7-202ENST00000394888 MEGF6O75095 1541 aa19.05■□□□□ 0.64
CPSF7-202ENST00000394888 NBPF7P0C2Y1 421 aaPredicted RBP19.04■□□□□ 0.64
CPSF7-202ENST00000394888 CIZ1Q9ULV3 898 aaPredicted RBP19.04■□□□□ 0.64
CPSF7-202ENST00000394888 NUP188Q5SRE5 1749 aa19.04■□□□□ 0.64
CPSF7-202ENST00000394888 PROSER3Q2NL68 480 aa19.04■□□□□ 0.64
CPSF7-202ENST00000394888 AKAP4Q5JQC9 854 aa19.04■□□□□ 0.64
CPSF7-202ENST00000394888 AFDNP55196 1824 aaKnown RBP19.04■□□□□ 0.64
CPSF7-202ENST00000394888 HOXB7P09629 217 aa19.03■□□□□ 0.64
CPSF7-202ENST00000394888 PKP1Q13835 747 aa19.03■□□□□ 0.64
CPSF7-202ENST00000394888 KCNH5Q8NCM2 988 aa19.03■□□□□ 0.64
CPSF7-202ENST00000394888 STK31Q9BXU1 1019 aa19.03■□□□□ 0.64
CPSF7-202ENST00000394888 HDGFL1Q5TGJ6 251 aa19.03■□□□□ 0.64
CPSF7-202ENST00000394888 PI4K2BQ8TCG2 481 aa19.03■□□□□ 0.64
CPSF7-202ENST00000394888 RNMTO43148 476 aaKnown RBP19.02■□□□□ 0.64
CPSF7-202ENST00000394888 TRHP20396 242 aaPredicted RBP19.02■□□□□ 0.64
CPSF7-202ENST00000394888 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.02■□□□□ 0.64
CPSF7-202ENST00000394888 TJP1Q07157 1748 aa19.02■□□□□ 0.64
CPSF7-202ENST00000394888 ZDHHC9Q9Y397 364 aa19.02■□□□□ 0.64
CPSF7-202ENST00000394888 PDIA6Q15084 440 aa19.02■□□□□ 0.63
CPSF7-202ENST00000394888 TRAK2O60296 914 aa19.01■□□□□ 0.63
CPSF7-202ENST00000394888 PSME1Q06323 249 aa19.01■□□□□ 0.63
CPSF7-202ENST00000394888 MPRIPQ6WCQ1 1025 aa19.01■□□□□ 0.63
CPSF7-202ENST00000394888 PALD1Q9ULE6 856 aa19.01■□□□□ 0.63
CPSF7-202ENST00000394888 ANXA1P04083 346 aa19.01■□□□□ 0.63
CPSF7-202ENST00000394888 GNAI3P08754 354 aa19.01■□□□□ 0.63
CPSF7-202ENST00000394888 SSFA2P28290 1259 aa19.01■□□□□ 0.63
CPSF7-202ENST00000394888 LRRCC1Q9C099 1032 aa19■□□□□ 0.63
CPSF7-202ENST00000394888 FOXD4L1Q9NU39 408 aa19■□□□□ 0.63
CPSF7-202ENST00000394888 XRCC6P12956 609 aaKnown RBP eCLIP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms