RNA–Protein interactions for RNA: ENST00000394828.6

PPP3CB-203, Transcript of protein phosphatase 3 catalytic subunit beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP3CB, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CB-203ENST00000394828 COG6Q9Y2V7 657 aa14.78□□□□□ -0.04
PPP3CB-203ENST00000394828 SOS2Q07890 1332 aaPredicted RBP14.77□□□□□ -0.04
PPP3CB-203ENST00000394828 CHMP4BQ9H444 224 aaKnown RBP14.77□□□□□ -0.04
PPP3CB-203ENST00000394828 ALDH1L2Q3SY69 923 aa14.77□□□□□ -0.05
PPP3CB-203ENST00000394828 ABCC6O95255 1503 aa14.76□□□□□ -0.05
PPP3CB-203ENST00000394828 MAP3K5Q99683 1374 aa14.76□□□□□ -0.05
PPP3CB-203ENST00000394828 JARID2Q92833 1246 aaPredicted RBP14.76□□□□□ -0.05
PPP3CB-203ENST00000394828 ERBB3P21860 1342 aa14.76□□□□□ -0.05
PPP3CB-203ENST00000394828 CLUAP1Q96AJ1 413 aa14.76□□□□□ -0.05
PPP3CB-203ENST00000394828 NOB1Q9ULX3 412 aaKnown RBP14.76□□□□□ -0.05
PPP3CB-203ENST00000394828 ELL2O00472 640 aaPredicted RBP14.75□□□□□ -0.05
PPP3CB-203ENST00000394828 TRIM27P14373 513 aa14.75□□□□□ -0.05
PPP3CB-203ENST00000394828 ZKSCAN2Q63HK3 967 aa14.75□□□□□ -0.05
PPP3CB-203ENST00000394828 LTBP4Q8N2S1 1624 aa14.75□□□□□ -0.05
PPP3CB-203ENST00000394828 GNAT3A8MTJ3 354 aa14.75□□□□□ -0.05
PPP3CB-203ENST00000394828 HTATSF1O43719 755 aaKnown RBP14.75□□□□□ -0.05
PPP3CB-203ENST00000394828 KRT24Q2M2I5 525 aa14.75□□□□□ -0.05
PPP3CB-203ENST00000394828 TWISTNBQ3B726 338 aaPredicted RBP14.75□□□□□ -0.05
PPP3CB-203ENST00000394828 GTF2E1P29083 439 aaPredicted RBP14.75□□□□□ -0.05
PPP3CB-203ENST00000394828 BRPF1P55201 1214 aaPredicted RBP14.75□□□□□ -0.05
PPP3CB-203ENST00000394828 RTF1Q92541 710 aaKnown RBP14.75□□□□□ -0.05
PPP3CB-203ENST00000394828 ZNF428Q96B54 188 aa14.75□□□□□ -0.05
PPP3CB-203ENST00000394828 MIS18AQ9NYP9 233 aa14.74□□□□□ -0.05
PPP3CB-203ENST00000394828 IL17REQ8NFR9 667 aa14.74□□□□□ -0.05
PPP3CB-203ENST00000394828 CPDO75976 1380 aa14.74□□□□□ -0.05
PPP3CB-203ENST00000394828 MRPL50Q8N5N7 158 aaKnown RBP14.73□□□□□ -0.05
PPP3CB-203ENST00000394828 ATF7IPQ6VMQ6 1270 aa14.73□□□□□ -0.05
PPP3CB-203ENST00000394828 KIAA0232Q92628 1395 aa14.73□□□□□ -0.05
PPP3CB-203ENST00000394828 DZIP1LQ8IYY4 767 aaKnown RBP14.72□□□□□ -0.05
PPP3CB-203ENST00000394828 KIF16BQ96L93 1317 aa14.72□□□□□ -0.05
PPP3CB-203ENST00000394828 ROBO1Q9Y6N7 1651 aa14.72□□□□□ -0.05
PPP3CB-203ENST00000394828 CHRNA2Q15822 529 aa14.72□□□□□ -0.05
PPP3CB-203ENST00000394828 KDM3BQ7LBC6 1761 aa14.72□□□□□ -0.05
PPP3CB-203ENST00000394828 CEMIPQ8WUJ3 1361 aa14.71□□□□□ -0.05
PPP3CB-203ENST00000394828 MVPQ14764 893 aaKnown RBP14.71□□□□□ -0.05
PPP3CB-203ENST00000394828 ADAMTS7Q9UKP4 1686 aa14.71□□□□□ -0.05
PPP3CB-203ENST00000394828 VGLL3A8MV65 326 aa14.71□□□□□ -0.05
PPP3CB-203ENST00000394828 FOXD4L1Q9NU39 408 aa14.7□□□□□ -0.06
PPP3CB-203ENST00000394828 SIPA1L3O60292 1781 aaPredicted RBP14.7□□□□□ -0.06
PPP3CB-203ENST00000394828 UQCRHLA0A096LP55 91 aa14.7□□□□□ -0.06
PPP3CB-203ENST00000394828 UQCRHP07919 91 aa14.7□□□□□ -0.06
PPP3CB-203ENST00000394828 FTSJ3Q8IY81 847 aaKnown RBP14.7□□□□□ -0.06
PPP3CB-203ENST00000394828 TSPYL4Q9UJ04 414 aa14.7□□□□□ -0.06
PPP3CB-203ENST00000394828 TSC1Q92574 1164 aa14.69□□□□□ -0.06
PPP3CB-203ENST00000394828 PDIA4P13667 645 aaKnown RBP14.69□□□□□ -0.06
PPP3CB-203ENST00000394828 OFD1O75665 1012 aa14.68□□□□□ -0.06
PPP3CB-203ENST00000394828 MEGF6O75095 1541 aa14.68□□□□□ -0.06
PPP3CB-203ENST00000394828 PKD1L3Q7Z443 1732 aa14.68□□□□□ -0.06
PPP3CB-203ENST00000394828 MAPK8IP2Q13387 824 aaPredicted RBP14.68□□□□□ -0.06
PPP3CB-203ENST00000394828 TMEM57Q8N5G2 664 aa14.68□□□□□ -0.06
PPP3CB-203ENST00000394828 TBC1D32Q96NH3 1257 aa14.68□□□□□ -0.06
PPP3CB-203ENST00000394828 LGR6Q9HBX8 967 aa14.68□□□□□ -0.06
PPP3CB-203ENST00000394828 NAP1L2Q9ULW6 460 aaPredicted RBP14.68□□□□□ -0.06
PPP3CB-203ENST00000394828 IPO8O15397 1037 aaKnown RBP14.67□□□□□ -0.06
PPP3CB-203ENST00000394828 PLEKHO1Q53GL0 409 aaPredicted RBP14.67□□□□□ -0.06
PPP3CB-203ENST00000394828 ZNF530Q6P9A1 599 aaPredicted RBP14.67□□□□□ -0.06
PPP3CB-203ENST00000394828 PCDHB15Q9Y5E8 787 aa14.67□□□□□ -0.06
PPP3CB-203ENST00000394828 AMOTQ4VCS5 1084 aa14.67□□□□□ -0.06
PPP3CB-203ENST00000394828 AKAP4Q5JQC9 854 aa14.67□□□□□ -0.06
PPP3CB-203ENST00000394828 ARHGAP45Q92619 1136 aa14.66□□□□□ -0.06
PPP3CB-203ENST00000394828 SCN11AQ9UI33 1791 aa14.66□□□□□ -0.06
PPP3CB-203ENST00000394828 AHDC1Q5TGY3 1603 aaPredicted RBP14.66□□□□□ -0.06
PPP3CB-203ENST00000394828 RGS12O14924 1447 aa14.66□□□□□ -0.06
PPP3CB-203ENST00000394828 PLCD3Q8N3E9 789 aa14.66□□□□□ -0.06
PPP3CB-203ENST00000394828 NLRP2Q9NX02 1062 aa14.66□□□□□ -0.06
PPP3CB-203ENST00000394828 IGSF3O75054 1194 aa14.66□□□□□ -0.06
PPP3CB-203ENST00000394828 MFAP1P55081 439 aaKnown RBP14.66□□□□□ -0.06
PPP3CB-203ENST00000394828 TAF7Q15545 349 aaPredicted RBP14.66□□□□□ -0.06
PPP3CB-203ENST00000394828 ITPRIPQ8IWB1 547 aa14.66□□□□□ -0.06
PPP3CB-203ENST00000394828 ZBTB22O15209 634 aa14.65□□□□□ -0.06
PPP3CB-203ENST00000394828 MSNP26038 577 aaKnown RBP14.65□□□□□ -0.06
PPP3CB-203ENST00000394828 CHMP5Q9NZZ3 219 aa14.65□□□□□ -0.06
PPP3CB-203ENST00000394828 ABCC4O15439 1325 aa14.65□□□□□ -0.06
PPP3CB-203ENST00000394828 ZSCAN30Q86W11 494 aa14.65□□□□□ -0.06
PPP3CB-203ENST00000394828 SMAP1Q8IYB5 467 aaPredicted RBP14.65□□□□□ -0.06
PPP3CB-203ENST00000394828 COL5A2P05997 1499 aaPredicted RBP14.65□□□□□ -0.06
PPP3CB-203ENST00000394828 OVOS2A0A0G2JMS6 1433 aa14.65□□□□□ -0.06
PPP3CB-203ENST00000394828 FAM177BA6PVY3 158 aa14.64□□□□□ -0.07
PPP3CB-203ENST00000394828 MPRIPQ6WCQ1 1025 aa14.64□□□□□ -0.07
PPP3CB-203ENST00000394828 BABAM1Q9NWV8 329 aa14.64□□□□□ -0.07
PPP3CB-203ENST00000394828 COL22A1Q8NFW1 1626 aaPredicted RBP14.64□□□□□ -0.07
PPP3CB-203ENST00000394828 DDX19BQ9UMR2 479 aa14.64□□□□□ -0.07
PPP3CB-203ENST00000394828 PARP4Q9UKK3 1724 aaKnown RBP14.63□□□□□ -0.07
PPP3CB-203ENST00000394828 UPF2Q9HAU5 1272 aaKnown RBP14.63□□□□□ -0.07
PPP3CB-203ENST00000394828 CACNA1FO60840 1977 aa14.63□□□□□ -0.07
PPP3CB-203ENST00000394828 RNMTO43148 476 aaKnown RBP14.63□□□□□ -0.07
PPP3CB-203ENST00000394828 CSB-PGBD3P0DP91 1061 aa14.63□□□□□ -0.07
PPP3CB-203ENST00000394828 PRDM11Q9NQV5 511 aa14.63□□□□□ -0.07
PPP3CB-203ENST00000394828 ZSCAN20P17040 1043 aaPredicted RBP14.62□□□□□ -0.07
PPP3CB-203ENST00000394828 NASPP49321 788 aaPredicted RBP14.62□□□□□ -0.07
PPP3CB-203ENST00000394828 TNPO1Q92973 898 aaKnown RBP14.62□□□□□ -0.07
PPP3CB-203ENST00000394828 ZBTB40Q9NUA8 1239 aa14.62□□□□□ -0.07
PPP3CB-203ENST00000394828 SHANK3Q9BYB0 1731 aa14.62□□□□□ -0.07
PPP3CB-203ENST00000394828 CBX1P83916 185 aa14.61□□□□□ -0.07
PPP3CB-203ENST00000394828 C1orf141Q5JVX7 400 aa14.61□□□□□ -0.07
PPP3CB-203ENST00000394828 KDM6AO15550 1401 aaPredicted RBP14.61□□□□□ -0.07
PPP3CB-203ENST00000394828 HAP1P54257 671 aaPredicted RBP14.61□□□□□ -0.07
PPP3CB-203ENST00000394828 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.61□□□□□ -0.07
PPP3CB-203ENST00000394828 RAPGEF4Q8WZA2 1011 aa14.61□□□□□ -0.07
PPP3CB-203ENST00000394828 COL16A1Q07092 1604 aaPredicted RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms