RNA–Protein interactions for RNA: ENST00000394684.8

SGMS2-202, Transcript of sphingomyelin synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS2, Length 6,149 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS2-202ENST00000394684 CCDC178Q5BJE1 867 aa10.23□□□□□ -0.77
SGMS2-202ENST00000394684 SMTNL1A8MU46 457 aa10.23□□□□□ -0.77
SGMS2-202ENST00000394684 STAC3Q96MF2 364 aa10.23□□□□□ -0.77
SGMS2-202ENST00000394684 BCAR3O75815 825 aa10.23□□□□□ -0.77
SGMS2-202ENST00000394684 CFAP100Q494V2 611 aa10.23□□□□□ -0.77
SGMS2-202ENST00000394684 CDK19Q9BWU1 502 aa10.23□□□□□ -0.77
SGMS2-202ENST00000394684 RUSC2Q8N2Y8 1516 aa10.23□□□□□ -0.77
SGMS2-202ENST00000394684 DNA2P51530 1060 aa10.23□□□□□ -0.77
SGMS2-202ENST00000394684 ZNF692Q9BU19 519 aaPredicted RBP10.23□□□□□ -0.77
SGMS2-202ENST00000394684 TMOD3Q9NYL9 352 aa10.23□□□□□ -0.77
SGMS2-202ENST00000394684 KRT32Q14532 448 aa10.22□□□□□ -0.77
SGMS2-202ENST00000394684 PUS7Q96PZ0 661 aaKnown RBP10.22□□□□□ -0.77
SGMS2-202ENST00000394684 IL1RAPL2Q9NP60 686 aa10.22□□□□□ -0.77
SGMS2-202ENST00000394684 MRPS9P82933 396 aaKnown RBP10.22□□□□□ -0.77
SGMS2-202ENST00000394684 RANBP6O60518 1105 aaKnown RBP10.22□□□□□ -0.77
SGMS2-202ENST00000394684 CFAP70Q5T0N1 1121 aa10.22□□□□□ -0.77
SGMS2-202ENST00000394684 KLHL10Q6JEL2 608 aa10.22□□□□□ -0.77
SGMS2-202ENST00000394684 TMEM266Q2M3C6 531 aa10.22□□□□□ -0.77
SGMS2-202ENST00000394684 RAB34Q9BZG1 259 aa10.22□□□□□ -0.77
SGMS2-202ENST00000394684 C6orf229H3BNL8 230 aa10.21□□□□□ -0.77
SGMS2-202ENST00000394684 RBM10P98175 930 aaKnown RBP10.21□□□□□ -0.77
SGMS2-202ENST00000394684 ZNF354CQ86Y25 554 aa10.21□□□□□ -0.77
SGMS2-202ENST00000394684 IFFO1Q0D2I5 559 aa10.21□□□□□ -0.77
SGMS2-202ENST00000394684 CTCFLQ8NI51 663 aaPredicted RBP10.21□□□□□ -0.77
SGMS2-202ENST00000394684 DDX23Q9BUQ8 820 aaKnown RBP10.21□□□□□ -0.77
SGMS2-202ENST00000394684 CABP1Q9NZU7 370 aa10.21□□□□□ -0.77
SGMS2-202ENST00000394684 LUZP1Q86V48 1076 aa10.21□□□□□ -0.77
SGMS2-202ENST00000394684 NUP62CLQ9H1M0 184 aa10.21□□□□□ -0.77
SGMS2-202ENST00000394684 PUF60Q9UHX1 559 aaKnown RBP10.21□□□□□ -0.77
SGMS2-202ENST00000394684 AKAP2Q9Y2D5 859 aa10.21□□□□□ -0.77
SGMS2-202ENST00000394684 HMGXB3Q12766 1538 aa10.21□□□□□ -0.78
SGMS2-202ENST00000394684 USP8P40818 1118 aa10.21□□□□□ -0.78
SGMS2-202ENST00000394684 NAPBQ9H115 298 aa10.21□□□□□ -0.78
SGMS2-202ENST00000394684 SMC1AQ14683 1233 aaKnown RBP10.21□□□□□ -0.78
SGMS2-202ENST00000394684 CRACR2AQ9BSW2 395 aa10.21□□□□□ -0.78
SGMS2-202ENST00000394684 SPTY2D1Q68D10 685 aaPredicted RBP10.2□□□□□ -0.78
SGMS2-202ENST00000394684 CCDC82Q8N4S0 544 aa10.2□□□□□ -0.78
SGMS2-202ENST00000394684 ZSCAN31Q96LW9 406 aaPredicted RBP10.2□□□□□ -0.78
SGMS2-202ENST00000394684 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.2□□□□□ -0.78
SGMS2-202ENST00000394684 SAMM50Q9Y512 469 aa10.2□□□□□ -0.78
SGMS2-202ENST00000394684 FERP16591 822 aa10.2□□□□□ -0.78
SGMS2-202ENST00000394684 SLF2Q8IX21 1173 aa10.2□□□□□ -0.78
SGMS2-202ENST00000394684 PPP6R1Q9UPN7 881 aa10.2□□□□□ -0.78
SGMS2-202ENST00000394684 CFTRP13569 1480 aa10.2□□□□□ -0.78
SGMS2-202ENST00000394684 RAD54L2Q9Y4B4 1467 aa10.2□□□□□ -0.78
SGMS2-202ENST00000394684 ATF7IPQ6VMQ6 1270 aa10.2□□□□□ -0.78
SGMS2-202ENST00000394684 NGLY1Q96IV0 654 aa10.2□□□□□ -0.78
SGMS2-202ENST00000394684 BCCIPQ9P287 314 aaKnown RBP eCLIP10.2□□□□□ -0.78
SGMS2-202ENST00000394684 BAG4O95429 457 aaKnown RBP10.19□□□□□ -0.78
SGMS2-202ENST00000394684 CETN1Q12798 172 aa10.19□□□□□ -0.78
SGMS2-202ENST00000394684 FERMT1Q9BQL6 677 aa10.19□□□□□ -0.78
SGMS2-202ENST00000394684 FGD5Q6ZNL6 1462 aa10.19□□□□□ -0.78
SGMS2-202ENST00000394684 FGFR1OPO95684 399 aaKnown RBP10.19□□□□□ -0.78
SGMS2-202ENST00000394684 TDRD12Q587J7 1177 aaKnown RBP10.19□□□□□ -0.78
SGMS2-202ENST00000394684 TSNARE1Q96NA8 513 aa10.19□□□□□ -0.78
SGMS2-202ENST00000394684 CLEC11AQ9Y240 323 aa10.19□□□□□ -0.78
SGMS2-202ENST00000394684 ARL1P40616 181 aaPredicted RBP10.19□□□□□ -0.78
SGMS2-202ENST00000394684 LMAN1P49257 510 aa10.19□□□□□ -0.78
SGMS2-202ENST00000394684 IQCA1Q86XH1 822 aa10.19□□□□□ -0.78
SGMS2-202ENST00000394684 MPHOSPH6Q99547 160 aaKnown RBP10.19□□□□□ -0.78
SGMS2-202ENST00000394684 U3KPZ7 1027 aaPredicted RBP10.19□□□□□ -0.78
SGMS2-202ENST00000394684 GCOM1H8Y6P7 765 aaPredicted RBP10.19□□□□□ -0.78
SGMS2-202ENST00000394684 MYZAPP0CAP1 466 aa10.19□□□□□ -0.78
SGMS2-202ENST00000394684 MPRIPQ6WCQ1 1025 aa10.19□□□□□ -0.78
SGMS2-202ENST00000394684 CCDC196A0A1B0GTZ2 297 aa10.18□□□□□ -0.78
SGMS2-202ENST00000394684 ANKRD18BA2A2Z9 1011 aa10.18□□□□□ -0.78
SGMS2-202ENST00000394684 MAP3K12Q12852 859 aa10.18□□□□□ -0.78
SGMS2-202ENST00000394684 ZNF622Q969S3 477 aaKnown RBP eCLIP10.18□□□□□ -0.78
SGMS2-202ENST00000394684 KIF20AO95235 890 aa10.18□□□□□ -0.78
SGMS2-202ENST00000394684 CASTP20810 708 aaKnown RBP10.18□□□□□ -0.78
SGMS2-202ENST00000394684 RRS1Q15050 365 aaKnown RBP10.18□□□□□ -0.78
SGMS2-202ENST00000394684 TCERG1LQ5VWI1 586 aa10.18□□□□□ -0.78
SGMS2-202ENST00000394684 NUTM1Q86Y26 1132 aa10.18□□□□□ -0.78
SGMS2-202ENST00000394684 RGS22Q8NE09 1264 aa10.18□□□□□ -0.78
SGMS2-202ENST00000394684 CABP5Q9NP86 173 aa10.18□□□□□ -0.78
SGMS2-202ENST00000394684 CCDC194A0A1B0GVG4 234 aa10.18□□□□□ -0.78
SGMS2-202ENST00000394684 SYCP3Q8IZU3 236 aa10.18□□□□□ -0.78
SGMS2-202ENST00000394684 GIMAP7Q8NHV1 300 aa10.18□□□□□ -0.78
SGMS2-202ENST00000394684 NLRP5P59047 1200 aa10.18□□□□□ -0.78
SGMS2-202ENST00000394684 LRSAM1Q6UWE0 723 aa10.18□□□□□ -0.78
SGMS2-202ENST00000394684 TMCO3Q6UWJ1 677 aa10.18□□□□□ -0.78
SGMS2-202ENST00000394684 K7ELQ4 463 aaPredicted RBP10.18□□□□□ -0.78
SGMS2-202ENST00000394684 TRMT112Q9UI30 125 aaKnown RBP10.18□□□□□ -0.78
SGMS2-202ENST00000394684 PRC1O43663 620 aa10.17□□□□□ -0.78
SGMS2-202ENST00000394684 SLC5A1P13866 664 aa10.17□□□□□ -0.78
SGMS2-202ENST00000394684 GIGYF2Q6Y7W6 1299 aaKnown RBP10.17□□□□□ -0.78
SGMS2-202ENST00000394684 BICD1Q96G01 975 aa10.17□□□□□ -0.78
SGMS2-202ENST00000394684 VAT1LQ9HCJ6 419 aa10.17□□□□□ -0.78
SGMS2-202ENST00000394684 CAMK4Q16566 473 aa10.17□□□□□ -0.78
SGMS2-202ENST00000394684 MYO1BO43795 1136 aa10.17□□□□□ -0.78
SGMS2-202ENST00000394684 SPECC1Q5M775 1068 aa10.17□□□□□ -0.78
SGMS2-202ENST00000394684 C16orf71Q8IYS4 520 aaPredicted RBP10.17□□□□□ -0.78
SGMS2-202ENST00000394684 AFAP1Q8N556 730 aa10.17□□□□□ -0.78
SGMS2-202ENST00000394684 SERPINA10Q9UK55 444 aa10.17□□□□□ -0.78
SGMS2-202ENST00000394684 IFIT5Q13325 482 aaKnown RBP10.17□□□□□ -0.78
SGMS2-202ENST00000394684 UBXN4Q92575 508 aa10.17□□□□□ -0.78
SGMS2-202ENST00000394684 MYD88Q99836 296 aa10.17□□□□□ -0.78
SGMS2-202ENST00000394684 PPP2R1AP30153 589 aa10.16□□□□□ -0.78
SGMS2-202ENST00000394684 PHAXQ9H814 394 aaKnown RBP10.16□□□□□ -0.78
SGMS2-202ENST00000394684 SHTN1A0MZ66 631 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms