RNA–Protein interactions for RNA: ENST00000394366.6

SRSF5-201, Transcript of serine and arginine rich splicing factor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF5, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-201ENST00000394366 C20orf194Q5TEA3 1177 aa17.13■□□□□ 0.33
SRSF5-201ENST00000394366 DDX54Q8TDD1 881 aaKnown RBP17.13■□□□□ 0.33
SRSF5-201ENST00000394366 ZCRB1Q8TBF4 217 aaKnown RBP17.12■□□□□ 0.33
SRSF5-201ENST00000394366 LAS1LQ9Y4W2 734 aaKnown RBP17.12■□□□□ 0.33
SRSF5-201ENST00000394366 RGPD2P0DJD1 1756 aa17.12■□□□□ 0.33
SRSF5-201ENST00000394366 KIF16BQ96L93 1317 aa17.12■□□□□ 0.33
SRSF5-201ENST00000394366 MTHFSDQ2M296 383 aaKnown RBP17.11■□□□□ 0.33
SRSF5-201ENST00000394366 SMC4Q9NTJ3 1288 aa17.11■□□□□ 0.33
SRSF5-201ENST00000394366 NCAPD2Q15021 1401 aa17.11■□□□□ 0.33
SRSF5-201ENST00000394366 MEGF6O75095 1541 aa17.11■□□□□ 0.33
SRSF5-201ENST00000394366 BRPF1P55201 1214 aaPredicted RBP17.1■□□□□ 0.33
SRSF5-201ENST00000394366 ZKSCAN2Q63HK3 967 aa17.1■□□□□ 0.33
SRSF5-201ENST00000394366 BCL11BQ9C0K0 894 aaPredicted RBP17.1■□□□□ 0.33
SRSF5-201ENST00000394366 MBIPQ9NS73 344 aa17.1■□□□□ 0.33
SRSF5-201ENST00000394366 EZH2Q15910 746 aaKnown RBP17.1■□□□□ 0.33
SRSF5-201ENST00000394366 FRAT1Q92837 279 aaPredicted RBP17.1■□□□□ 0.33
SRSF5-201ENST00000394366 THUMPD2Q9BTF0 503 aaKnown RBP17.1■□□□□ 0.33
SRSF5-201ENST00000394366 TNS1Q9HBL0 1735 aaKnown RBP17.09■□□□□ 0.33
SRSF5-201ENST00000394366 IPO8O15397 1037 aaKnown RBP17.09■□□□□ 0.33
SRSF5-201ENST00000394366 CAMKK2Q96RR4 588 aa17.09■□□□□ 0.33
SRSF5-201ENST00000394366 GNAT3A8MTJ3 354 aa17.08■□□□□ 0.32
SRSF5-201ENST00000394366 CHL1O00533 1208 aa17.08■□□□□ 0.32
SRSF5-201ENST00000394366 ACSBG1Q96GR2 724 aa17.08■□□□□ 0.32
SRSF5-201ENST00000394366 MAP3K5Q99683 1374 aa17.08■□□□□ 0.32
SRSF5-201ENST00000394366 PLEKHG2Q9H7P9 1386 aa17.08■□□□□ 0.32
SRSF5-201ENST00000394366 PTF1AQ7RTS3 328 aa17.07■□□□□ 0.32
SRSF5-201ENST00000394366 SSH1Q8WYL5 1049 aa17.07■□□□□ 0.32
SRSF5-201ENST00000394366 DCTN1Q14203 1278 aa17.07■□□□□ 0.32
SRSF5-201ENST00000394366 BABAM1Q9NWV8 329 aa17.07■□□□□ 0.32
SRSF5-201ENST00000394366 KCNQ2O43526 872 aa17.06■□□□□ 0.32
SRSF5-201ENST00000394366 VAMP4O75379 141 aa17.06■□□□□ 0.32
SRSF5-201ENST00000394366 AMOTQ4VCS5 1084 aa17.06■□□□□ 0.32
SRSF5-201ENST00000394366 MCM10Q7L590 875 aa17.06■□□□□ 0.32
SRSF5-201ENST00000394366 BCL2L13Q9BXK5 485 aa17.06■□□□□ 0.32
SRSF5-201ENST00000394366 TWISTNBQ3B726 338 aaPredicted RBP17.05■□□□□ 0.32
SRSF5-201ENST00000394366 FTSJ3Q8IY81 847 aaKnown RBP17.05■□□□□ 0.32
SRSF5-201ENST00000394366 PLSCR1O15162 318 aa17.04■□□□□ 0.32
SRSF5-201ENST00000394366 ATF7IPQ6VMQ6 1270 aa17.04■□□□□ 0.32
SRSF5-201ENST00000394366 DZIP1LQ8IYY4 767 aaKnown RBP17.04■□□□□ 0.32
SRSF5-201ENST00000394366 PCDH11XQ9BZA7 1347 aa17.04■□□□□ 0.32
SRSF5-201ENST00000394366 PCDH11YQ9BZA8 1340 aa17.04■□□□□ 0.32
SRSF5-201ENST00000394366 SBF2Q86WG5 1849 aa17.04■□□□□ 0.32
SRSF5-201ENST00000394366 PLEKHO1Q53GL0 409 aaPredicted RBP17.03■□□□□ 0.32
SRSF5-201ENST00000394366 CENPQQ7L2Z9 268 aaPredicted RBP17.03■□□□□ 0.32
SRSF5-201ENST00000394366 ARHGAP45Q92619 1136 aa17.03■□□□□ 0.32
SRSF5-201ENST00000394366 SPG7Q9UQ90 795 aa17.03■□□□□ 0.32
SRSF5-201ENST00000394366 PANK1Q8TE04 598 aa17.03■□□□□ 0.32
SRSF5-201ENST00000394366 SOS1Q07889 1333 aaPredicted RBP17.03■□□□□ 0.32
SRSF5-201ENST00000394366 CLUAP1Q96AJ1 413 aa17.02■□□□□ 0.31
SRSF5-201ENST00000394366 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.02■□□□□ 0.313e-22■■□□□ 13.6
SRSF5-201ENST00000394366 COG6Q9Y2V7 657 aa17.02■□□□□ 0.31
SRSF5-201ENST00000394366 MVPQ14764 893 aaKnown RBP17.01■□□□□ 0.31
SRSF5-201ENST00000394366 SYTL4Q96C24 671 aaPredicted RBP17.01■□□□□ 0.31
SRSF5-201ENST00000394366 TSHZ2Q9NRE2 1034 aa17.01■□□□□ 0.31
SRSF5-201ENST00000394366 CYP27B1O15528 508 aa17■□□□□ 0.31
SRSF5-201ENST00000394366 TRIM27P14373 513 aa17■□□□□ 0.31
SRSF5-201ENST00000394366 PRIM1P49642 420 aaKnown RBP17■□□□□ 0.31
SRSF5-201ENST00000394366 AKAP4Q5JQC9 854 aa17■□□□□ 0.31
SRSF5-201ENST00000394366 CHMP4BQ9H444 224 aaKnown RBP17■□□□□ 0.31
SRSF5-201ENST00000394366 TSPYL4Q9UJ04 414 aa17■□□□□ 0.31
SRSF5-201ENST00000394366 NOB1Q9ULX3 412 aaKnown RBP17■□□□□ 0.31
SRSF5-201ENST00000394366 MRPL50Q8N5N7 158 aaKnown RBP16.99■□□□□ 0.31
SRSF5-201ENST00000394366 TSPYL6Q8N831 410 aa16.99■□□□□ 0.31
SRSF5-201ENST00000394366 C8orf58Q8NAV2 365 aa16.99■□□□□ 0.31
SRSF5-201ENST00000394366 DDX19BQ9UMR2 479 aa16.99■□□□□ 0.31
SRSF5-201ENST00000394366 SHANK3Q9BYB0 1731 aa16.99■□□□□ 0.31
SRSF5-201ENST00000394366 NHSQ6T4R5 1651 aa16.99■□□□□ 0.31
SRSF5-201ENST00000394366 CEMIPQ8WUJ3 1361 aa16.99■□□□□ 0.31
SRSF5-201ENST00000394366 KDM2BQ8NHM5 1336 aa16.99■□□□□ 0.31
SRSF5-201ENST00000394366 RLBP1P12271 317 aa16.98■□□□□ 0.31
SRSF5-201ENST00000394366 TAF7Q15545 349 aaPredicted RBP16.98■□□□□ 0.31
SRSF5-201ENST00000394366 NBPF14Q5TI25 921 aa16.98■□□□□ 0.31
SRSF5-201ENST00000394366 TXNRD1Q16881 649 aa16.97■□□□□ 0.31
SRSF5-201ENST00000394366 C1orf141Q5JVX7 400 aa16.97■□□□□ 0.31
SRSF5-201ENST00000394366 IFNL2Q8IZJ0 200 aa16.97■□□□□ 0.31
SRSF5-201ENST00000394366 PROM2Q8N271 834 aa16.97■□□□□ 0.31
SRSF5-201ENST00000394366 CHMP4AQ9BY43 222 aa16.97■□□□□ 0.31
SRSF5-201ENST00000394366 PSDA5PKW4 1024 aaPredicted RBP16.96■□□□□ 0.31
SRSF5-201ENST00000394366 ZNF530Q6P9A1 599 aaPredicted RBP16.96■□□□□ 0.31
SRSF5-201ENST00000394366 IL17REQ8NFR9 667 aa16.96■□□□□ 0.31
SRSF5-201ENST00000394366 API5Q9BZZ5 524 aaKnown RBP16.96■□□□□ 0.31
SRSF5-201ENST00000394366 PKD1L3Q7Z443 1732 aa16.96■□□□□ 0.31
SRSF5-201ENST00000394366 ELL2O00472 640 aaPredicted RBP16.96■□□□□ 0.3
SRSF5-201ENST00000394366 PHKG2P15735 406 aa16.96■□□□□ 0.3
SRSF5-201ENST00000394366 R3HDM1Q15032 1099 aaKnown RBP16.96■□□□□ 0.3
SRSF5-201ENST00000394366 NKX1-1Q15270 411 aaPredicted RBP16.96■□□□□ 0.3
SRSF5-201ENST00000394366 RREB1Q92766 1687 aa16.95■□□□□ 0.3
SRSF5-201ENST00000394366 TCERG1O14776 1098 aaKnown RBP16.95■□□□□ 0.3
SRSF5-201ENST00000394366 RGPD3A6NKT7 1758 aaPredicted RBP16.95■□□□□ 0.3
SRSF5-201ENST00000394366 RGPD4Q7Z3J3 1758 aa16.95■□□□□ 0.3
SRSF5-201ENST00000394366 DOT1LQ8TEK3 1739 aa16.93■□□□□ 0.3
SRSF5-201ENST00000394366 ITPRIPQ8IWB1 547 aa16.93■□□□□ 0.3
SRSF5-201ENST00000394366 TNNQ9UQP3 1299 aa16.93■□□□□ 0.3
SRSF5-201ENST00000394366 KAT6BQ8WYB5 2073 aa16.93■□□□□ 0.3
SRSF5-201ENST00000394366 PTPRCP08575 1304 aa16.93■□□□□ 0.3
SRSF5-201ENST00000394366 MPRIPQ6WCQ1 1025 aa16.92■□□□□ 0.3
SRSF5-201ENST00000394366 BTAF1O14981 1849 aa16.92■□□□□ 0.3
SRSF5-201ENST00000394366 ADAMTS7Q9UKP4 1686 aa16.92■□□□□ 0.3
SRSF5-201ENST00000394366 NUP188Q5SRE5 1749 aa16.92■□□□□ 0.3
SRSF5-201ENST00000394366 HSP90AB1P08238 724 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms