RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 PHOX2BQ99453 314 aa7.67□□□□□ -1.18
CASC3-202ENST00000394114 PPP2R2DQ66LE6 453 aa7.67□□□□□ -1.18
CASC3-202ENST00000394114 POLKQ9UBT6 870 aa7.67□□□□□ -1.18
CASC3-202ENST00000394114 USP6P35125 1406 aa7.67□□□□□ -1.18
CASC3-202ENST00000394114 PRIM1P49642 420 aaKnown RBP7.66□□□□□ -1.18
CASC3-202ENST00000394114 FMN2Q9NZ56 1722 aa7.66□□□□□ -1.18
CASC3-202ENST00000394114 INSRP06213 1382 aa7.66□□□□□ -1.18
CASC3-202ENST00000394114 PAK3O75914 559 aaPredicted RBP7.66□□□□□ -1.18
CASC3-202ENST00000394114 ABL2P42684 1182 aa7.66□□□□□ -1.18
CASC3-202ENST00000394114 KIF12Q96FN5 646 aa7.66□□□□□ -1.18
CASC3-202ENST00000394114 FAM217BQ9NTX9 383 aaPredicted RBP7.66□□□□□ -1.18
CASC3-202ENST00000394114 TCP11L2Q8N4U5 519 aa7.65□□□□□ -1.18
CASC3-202ENST00000394114 NRKQ7Z2Y5 1582 aa7.65□□□□□ -1.18
CASC3-202ENST00000394114 DIAPH1O60610 1272 aaKnown RBP7.65□□□□□ -1.18
CASC3-202ENST00000394114 RFX1P22670 979 aa7.65□□□□□ -1.18
CASC3-202ENST00000394114 ESCO1Q5FWF5 840 aa7.65□□□□□ -1.18
CASC3-202ENST00000394114 DHX37Q8IY37 1157 aaKnown RBP7.65□□□□□ -1.18
CASC3-202ENST00000394114 VRTNQ9H8Y1 702 aa7.65□□□□□ -1.18
CASC3-202ENST00000394114 GNEQ9Y223 722 aaKnown RBP7.65□□□□□ -1.18
CASC3-202ENST00000394114 COL3A1P02461 1466 aaPredicted RBP7.65□□□□□ -1.18
CASC3-202ENST00000394114 XPCQ01831 940 aaPredicted RBP7.65□□□□□ -1.19
CASC3-202ENST00000394114 PDE3BQ13370 1112 aa7.65□□□□□ -1.19
CASC3-202ENST00000394114 RUNDC1Q96C34 613 aa7.65□□□□□ -1.19
CASC3-202ENST00000394114 KIAA1522Q9P206 1035 aaPredicted RBP7.65□□□□□ -1.19
CASC3-202ENST00000394114 FARP1Q9Y4F1 1045 aaPredicted RBP7.65□□□□□ -1.19
CASC3-202ENST00000394114 ADGRL3Q9HAR2 1447 aa7.64□□□□□ -1.19
CASC3-202ENST00000394114 HMOX1P09601 288 aa7.64□□□□□ -1.19
CASC3-202ENST00000394114 MAP3K9P80192 1104 aa7.64□□□□□ -1.19
CASC3-202ENST00000394114 GOLGA2Q08379 1002 aa7.64□□□□□ -1.19
CASC3-202ENST00000394114 ADAMTS19Q8TE59 1207 aa7.64□□□□□ -1.19
CASC3-202ENST00000394114 ORAI2Q96SN7 254 aa7.64□□□□□ -1.19
CASC3-202ENST00000394114 RCAN3Q9UKA8 241 aa7.64□□□□□ -1.19
CASC3-202ENST00000394114 ZNF521Q96K83 1311 aa7.64□□□□□ -1.19
CASC3-202ENST00000394114 TMEM88BA6NKF7 163 aa7.63□□□□□ -1.19
CASC3-202ENST00000394114 TBC1D2BQ9UPU7 963 aa7.63□□□□□ -1.19
CASC3-202ENST00000394114 ANKARQ7Z5J8 1434 aa7.63□□□□□ -1.19
CASC3-202ENST00000394114 DDX12PQ92771 950 aa7.63□□□□□ -1.19
CASC3-202ENST00000394114 PRM3Q9NNZ6 103 aa7.63□□□□□ -1.19
CASC3-202ENST00000394114 STRCP1A6NGW2 1772 aa7.62□□□□□ -1.19
CASC3-202ENST00000394114 HDGFL1Q5TGJ6 251 aa7.62□□□□□ -1.19
CASC3-202ENST00000394114 DUSP27Q5VZP5 1158 aa7.62□□□□□ -1.19
CASC3-202ENST00000394114 ABTB2Q8N961 1025 aa7.62□□□□□ -1.19
CASC3-202ENST00000394114 PNPLA6Q8IY17 1366 aa7.62□□□□□ -1.19
CASC3-202ENST00000394114 OVOS2A0A0J9YW53 1432 aa7.62□□□□□ -1.19
CASC3-202ENST00000394114 OVOS2Q6IE36 1432 aa7.62□□□□□ -1.19
CASC3-202ENST00000394114 FOXO3O43524 673 aa7.62□□□□□ -1.19
CASC3-202ENST00000394114 PLIN1O60240 522 aa7.62□□□□□ -1.19
CASC3-202ENST00000394114 MRRFQ96E11 262 aaKnown RBP7.62□□□□□ -1.19
CASC3-202ENST00000394114 MAPK8IP3Q9UPT6 1336 aa7.62□□□□□ -1.19
CASC3-202ENST00000394114 SSH2Q76I76 1423 aa7.62□□□□□ -1.19
CASC3-202ENST00000394114 PIK3C2AO00443 1686 aa7.62□□□□□ -1.19
CASC3-202ENST00000394114 NWD1Q149M9 1564 aa7.61□□□□□ -1.19
CASC3-202ENST00000394114 TMEM94Q12767 1356 aa7.61□□□□□ -1.19
CASC3-202ENST00000394114 PRKAR2BP31323 418 aa7.61□□□□□ -1.19
CASC3-202ENST00000394114 PSME1Q06323 249 aa7.61□□□□□ -1.19
CASC3-202ENST00000394114 SLFN5Q08AF3 891 aa7.61□□□□□ -1.19
CASC3-202ENST00000394114 HSP90AB2PQ58FF8 381 aa7.61□□□□□ -1.19
CASC3-202ENST00000394114 RBM42Q9BTD8 480 aaKnown RBP7.61□□□□□ -1.19
CASC3-202ENST00000394114 IQSEC2Q5JU85 1478 aa7.61□□□□□ -1.19
CASC3-202ENST00000394114 AATKQ6ZMQ8 1374 aa7.61□□□□□ -1.19
CASC3-202ENST00000394114 TTC21AQ8NDW8 1320 aa7.61□□□□□ -1.19
CASC3-202ENST00000394114 CHADLQ6NUI6 762 aa7.61□□□□□ -1.19
CASC3-202ENST00000394114 LRRC7Q96NW7 1537 aa7.61□□□□□ -1.19
CASC3-202ENST00000394114 CDK12Q9NYV4 1490 aaPredicted RBP7.61□□□□□ -1.19
CASC3-202ENST00000394114 ZNF335Q9H4Z2 1342 aaPredicted RBP7.6□□□□□ -1.19
CASC3-202ENST00000394114 CANXP27824 592 aaKnown RBP7.6□□□□□ -1.19
CASC3-202ENST00000394114 PLPP6Q8IY26 295 aa7.6□□□□□ -1.19
CASC3-202ENST00000394114 PLEKHF1Q96S99 279 aa7.6□□□□□ -1.19
CASC3-202ENST00000394114 TBC1D2Q9BYX2 928 aa7.6□□□□□ -1.19
CASC3-202ENST00000394114 PPP1R12CQ9BZL4 782 aa7.6□□□□□ -1.19
CASC3-202ENST00000394114 MAP3K19Q56UN5 1328 aa7.6□□□□□ -1.19
CASC3-202ENST00000394114 IL13P35225 146 aa7.6□□□□□ -1.19
CASC3-202ENST00000394114 RRP1P56182 461 aaKnown RBP7.6□□□□□ -1.19
CASC3-202ENST00000394114 TMC2Q8TDI7 906 aa7.6□□□□□ -1.19
CASC3-202ENST00000394114 PHACTR3Q96KR7 559 aa7.6□□□□□ -1.19
CASC3-202ENST00000394114 PEAK1Q9H792 1746 aa7.6□□□□□ -1.19
CASC3-202ENST00000394114 PITPNM1O00562 1244 aa7.59□□□□□ -1.19
CASC3-202ENST00000394114 TMPOP42166 694 aaKnown RBP7.59□□□□□ -1.19
CASC3-202ENST00000394114 DDX17Q92841 729 aaKnown RBP7.59□□□□□ -1.19
CASC3-202ENST00000394114 C19orf44Q9H6X5 657 aa7.59□□□□□ -1.19
CASC3-202ENST00000394114 STRCQ7RTU9 1775 aa7.59□□□□□ -1.19
CASC3-202ENST00000394114 ATF3P18847 181 aa7.59□□□□□ -1.19
CASC3-202ENST00000394114 AMPHP49418 695 aa7.59□□□□□ -1.19
CASC3-202ENST00000394114 RIPK4P57078 832 aa7.59□□□□□ -1.19
CASC3-202ENST00000394114 EIF4A2Q14240 407 aaKnown RBP7.59□□□□□ -1.19
CASC3-202ENST00000394114 B4GALNT3Q6L9W6 998 aa7.59□□□□□ -1.19
CASC3-202ENST00000394114 NPDC1Q9NQX5 325 aaPredicted RBP7.59□□□□□ -1.19
CASC3-202ENST00000394114 LIMD1Q9UGP4 676 aa7.59□□□□□ -1.19
CASC3-202ENST00000394114 RNF123Q5XPI4 1314 aa7.59□□□□□ -1.19
CASC3-202ENST00000394114 NEFMP07197 916 aa7.58□□□□□ -1.2
CASC3-202ENST00000394114 DIXDC1Q155Q3 683 aa7.58□□□□□ -1.2
CASC3-202ENST00000394114 LTV1Q96GA3 475 aaPredicted RBP7.58□□□□□ -1.2
CASC3-202ENST00000394114 MARF1Q9Y4F3 1742 aaKnown RBP7.58□□□□□ -1.2
CASC3-202ENST00000394114 USP31Q70CQ4 1352 aa7.58□□□□□ -1.2
CASC3-202ENST00000394114 ERCC3P19447 782 aa7.58□□□□□ -1.2
CASC3-202ENST00000394114 SULT6B1Q6IMI4 303 aa7.58□□□□□ -1.2
CASC3-202ENST00000394114 TRIM35Q9UPQ4 493 aa7.58□□□□□ -1.2
CASC3-202ENST00000394114 ATG7O95352 703 aa7.57□□□□□ -1.2
CASC3-202ENST00000394114 DNAJC14Q6Y2X3 702 aaPredicted RBP7.57□□□□□ -1.2
CASC3-202ENST00000394114 TRMT2AQ8IZ69 625 aaKnown RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms