RNA–Protein interactions for RNA: ENST00000394081.7

RARA-202, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 2,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-202ENST00000394081 USP48Q86UV5 1035 aa27.51■■□□□ 1.99
RARA-202ENST00000394081 ZNF710Q8N1W2 664 aa27.51■■□□□ 1.99
RARA-202ENST00000394081 MX1P20591 662 aa27.5■■□□□ 1.99
RARA-202ENST00000394081 RPAP1Q9BWH6 1393 aaPredicted RBP27.49■■□□□ 1.99
RARA-202ENST00000394081 NRKQ7Z2Y5 1582 aa27.48■■□□□ 1.99
RARA-202ENST00000394081 ADCY5O95622 1261 aa27.48■■□□□ 1.99
RARA-202ENST00000394081 FAM83GA6ND36 823 aa27.48■■□□□ 1.99
RARA-202ENST00000394081 CCT4P50991 539 aaKnown RBP27.48■■□□□ 1.99
RARA-202ENST00000394081 APBB1O00213 710 aa27.47■■□□□ 1.99
RARA-202ENST00000394081 GADD45BO75293 160 aaPredicted RBP27.47■■□□□ 1.99
RARA-202ENST00000394081 FBLN1P23142 703 aa27.47■■□□□ 1.99
RARA-202ENST00000394081 SRCIN1Q9C0H9 1055 aa27.47■■□□□ 1.99
RARA-202ENST00000394081 USP25Q9UHP3 1055 aa27.47■■□□□ 1.99
RARA-202ENST00000394081 CHMLP26374 656 aa27.47■■□□□ 1.99
RARA-202ENST00000394081 PREX1Q8TCU6 1659 aa27.46■■□□□ 1.99
RARA-202ENST00000394081 DIAPH3Q9NSV4 1193 aa27.46■■□□□ 1.99
RARA-202ENST00000394081 PALD1Q9ULE6 856 aa27.46■■□□□ 1.99
RARA-202ENST00000394081 AOX1Q06278 1338 aa27.46■■□□□ 1.99
RARA-202ENST00000394081 KDM4AO75164 1064 aa27.45■■□□□ 1.98
RARA-202ENST00000394081 UBE2HP62256 183 aa27.45■■□□□ 1.98
RARA-202ENST00000394081 STAP2Q9UGK3 403 aa27.45■■□□□ 1.98
RARA-202ENST00000394081 KIF20AO95235 890 aa27.44■■□□□ 1.98
RARA-202ENST00000394081 ARHGEF10O15013 1369 aa27.43■■□□□ 1.98
RARA-202ENST00000394081 ANO2Q9NQ90 1003 aa27.43■■□□□ 1.98
RARA-202ENST00000394081 DCTN1Q14203 1278 aa27.42■■□□□ 1.98
RARA-202ENST00000394081 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.42■■□□□ 1.98
RARA-202ENST00000394081 LRRCC1Q9C099 1032 aa27.42■■□□□ 1.98
RARA-202ENST00000394081 ATP6V1DQ9Y5K8 247 aa27.42■■□□□ 1.98
RARA-202ENST00000394081 DIP2CQ9Y2E4 1556 aa27.42■■□□□ 1.98
RARA-202ENST00000394081 GNAI2P04899 355 aa27.41■■□□□ 1.98
RARA-202ENST00000394081 TTC12Q9H892 705 aaPredicted RBP27.41■■□□□ 1.98
RARA-202ENST00000394081 CHAF1AQ13111 956 aaPredicted RBP27.41■■□□□ 1.98
RARA-202ENST00000394081 KRT24Q2M2I5 525 aa27.41■■□□□ 1.98
RARA-202ENST00000394081 COG3Q96JB2 828 aa27.4■■□□□ 1.98
RARA-202ENST00000394081 PRDM10Q9NQV6 1147 aa27.4■■□□□ 1.98
RARA-202ENST00000394081 MON2Q7Z3U7 1717 aa27.4■■□□□ 1.98
RARA-202ENST00000394081 KIAA1524Q8TCG1 905 aa27.39■■□□□ 1.98
RARA-202ENST00000394081 ZNF830Q96NB3 372 aaPredicted RBP27.39■■□□□ 1.98
RARA-202ENST00000394081 ARID3AQ99856 593 aa27.39■■□□□ 1.98
RARA-202ENST00000394081 ZSCAN22P10073 491 aaPredicted RBP27.39■■□□□ 1.98
RARA-202ENST00000394081 HSPA4P34932 840 aa27.39■■□□□ 1.98
RARA-202ENST00000394081 FUCA2Q9BTY2 467 aa27.39■■□□□ 1.98
RARA-202ENST00000394081 GDPD2Q9HCC8 539 aa27.39■■□□□ 1.98
RARA-202ENST00000394081 TCHHQ07283 1943 aa27.39■■□□□ 1.97
RARA-202ENST00000394081 BCL2L12Q9HB09 334 aa27.38■■□□□ 1.97
RARA-202ENST00000394081 HCLS1P14317 486 aaPredicted RBP27.38■■□□□ 1.97
RARA-202ENST00000394081 SLC4A2P04920 1241 aa27.37■■□□□ 1.97
RARA-202ENST00000394081 PPP4R3BQ5MIZ7 849 aa27.37■■□□□ 1.97
RARA-202ENST00000394081 NME9Q86XW9 330 aa27.37■■□□□ 1.97
RARA-202ENST00000394081 GOLGA6L6A8MZA4 724 aa27.37■■□□□ 1.97
RARA-202ENST00000394081 ANKRD7Q92527 254 aa27.36■■□□□ 1.97
RARA-202ENST00000394081 NEO1Q92859 1461 aa27.35■■□□□ 1.97
RARA-202ENST00000394081 CTIFO43310 598 aaKnown RBP27.35■■□□□ 1.97
RARA-202ENST00000394081 GNAI3P08754 354 aa27.35■■□□□ 1.97
RARA-202ENST00000394081 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.35■■□□□ 1.97
RARA-202ENST00000394081 CRB1P82279 1406 aa27.34■■□□□ 1.97
RARA-202ENST00000394081 PDCL2Q8N4E4 241 aa27.34■■□□□ 1.97
RARA-202ENST00000394081 C3P01024 1663 aa27.34■■□□□ 1.97
RARA-202ENST00000394081 UPF3BQ9BZI7 483 aaKnown RBP27.33■■□□□ 1.97
RARA-202ENST00000394081 ZHX1Q9UKY1 873 aaPredicted RBP27.33■■□□□ 1.97
RARA-202ENST00000394081 CNPY2Q9Y2B0 182 aa27.33■■□□□ 1.97
RARA-202ENST00000394081 EXOC6BQ9Y2D4 811 aa27.33■■□□□ 1.97
RARA-202ENST00000394081 TRIM6-TRIM34B2RNG4 842 aa27.33■■□□□ 1.97
RARA-202ENST00000394081 SYCP1Q15431 976 aa27.33■■□□□ 1.97
RARA-202ENST00000394081 NOL8Q76FK4 1167 aaKnown RBP27.33■■□□□ 1.97
RARA-202ENST00000394081 STX6O43752 255 aa27.32■■□□□ 1.96
RARA-202ENST00000394081 ATP8B2P98198 1209 aa27.32■■□□□ 1.96
RARA-202ENST00000394081 RILPL2Q969X0 211 aa27.32■■□□□ 1.96
RARA-202ENST00000394081 TSC1Q92574 1164 aa27.32■■□□□ 1.96
RARA-202ENST00000394081 FEZ1Q99689 392 aa27.32■■□□□ 1.96
RARA-202ENST00000394081 F13A1P00488 732 aa27.31■■□□□ 1.96
RARA-202ENST00000394081 CBX1P83916 185 aa27.31■■□□□ 1.96
RARA-202ENST00000394081 ATP2B3Q16720 1220 aa27.31■■□□□ 1.96
RARA-202ENST00000394081 TTC14Q96N46 770 aa27.31■■□□□ 1.96
RARA-202ENST00000394081 SETD1AO15047 1707 aaKnown RBP27.31■■□□□ 1.96
RARA-202ENST00000394081 PODXL2Q9NZ53 605 aa27.3■■□□□ 1.96
RARA-202ENST00000394081 AKAP12Q02952 1782 aa27.3■■□□□ 1.96
RARA-202ENST00000394081 JARID2Q92833 1246 aaPredicted RBP27.3■■□□□ 1.96
RARA-202ENST00000394081 RAD50Q92878 1312 aa27.3■■□□□ 1.96
RARA-202ENST00000394081 N4BP2Q86UW6 1770 aaPredicted RBP27.29■■□□□ 1.96
RARA-202ENST00000394081 CPS1P31327 1500 aa27.29■■□□□ 1.96
RARA-202ENST00000394081 WASLO00401 505 aaPredicted RBP27.29■■□□□ 1.96
RARA-202ENST00000394081 RRS1Q15050 365 aaKnown RBP27.29■■□□□ 1.96
RARA-202ENST00000394081 FOXD4L6Q3SYB3 417 aaPredicted RBP27.29■■□□□ 1.96
RARA-202ENST00000394081 FOXD4L3Q6VB84 417 aaPredicted RBP27.29■■□□□ 1.96
RARA-202ENST00000394081 C17orf53Q8N3J3 647 aaPredicted RBP27.29■■□□□ 1.96
RARA-202ENST00000394081 LIMCH1Q9UPQ0 1083 aa27.29■■□□□ 1.96
RARA-202ENST00000394081 SYT1P21579 422 aa27.28■■□□□ 1.96
RARA-202ENST00000394081 PDIA4P13667 645 aaKnown RBP27.28■■□□□ 1.96
RARA-202ENST00000394081 SULT6B1Q6IMI4 303 aa27.28■■□□□ 1.96
RARA-202ENST00000394081 KCNF1Q9H3M0 494 aa27.28■■□□□ 1.96
RARA-202ENST00000394081 RGPD1P0DJD0 1748 aa27.27■■□□□ 1.96
RARA-202ENST00000394081 RIOK3O14730 519 aaKnown RBP27.27■■□□□ 1.96
RARA-202ENST00000394081 TSHZ3Q63HK5 1081 aa27.27■■□□□ 1.96
RARA-202ENST00000394081 EIF4A2Q14240 407 aaKnown RBP27.27■■□□□ 1.96
RARA-202ENST00000394081 SLC4A10Q6U841 1118 aa27.27■■□□□ 1.96
RARA-202ENST00000394081 MCM10Q7L590 875 aa27.27■■□□□ 1.96
RARA-202ENST00000394081 MPNDQ8N594 471 aa27.27■■□□□ 1.96
RARA-202ENST00000394081 CCDC192P0DO97 292 aa27.26■■□□□ 1.95
RARA-202ENST00000394081 AEBP1Q8IUX7 1158 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms