RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 ARHGEF25Q86VW2 580 aa9.81□□□□□ -0.84
ATXN3-203ENST00000393287 CWC22Q9HCG8 908 aaKnown RBP9.81□□□□□ -0.84
ATXN3-203ENST00000393287 PARD3Q8TEW0 1356 aa9.81□□□□□ -0.84
ATXN3-203ENST00000393287 PER1O15534 1290 aaPredicted RBP9.81□□□□□ -0.84
ATXN3-203ENST00000393287 LRRCC1Q9C099 1032 aa9.81□□□□□ -0.84
ATXN3-203ENST00000393287 ANO2Q9NQ90 1003 aa9.81□□□□□ -0.84
ATXN3-203ENST00000393287 CLTCQ00610 1675 aaKnown RBP9.81□□□□□ -0.84
ATXN3-203ENST00000393287 KIF24Q5T7B8 1368 aa9.81□□□□□ -0.84
ATXN3-203ENST00000393287 FAM98CQ17RN3 349 aaKnown RBP9.8□□□□□ -0.84
ATXN3-203ENST00000393287 RIMS1Q86UR5 1692 aaKnown RBP9.8□□□□□ -0.84
ATXN3-203ENST00000393287 USP6P35125 1406 aa9.8□□□□□ -0.84
ATXN3-203ENST00000393287 SURF6O75683 361 aaKnown RBP9.8□□□□□ -0.84
ATXN3-203ENST00000393287 XBP1P17861 261 aa9.8□□□□□ -0.84
ATXN3-203ENST00000393287 MAP3K5Q99683 1374 aa9.8□□□□□ -0.84
ATXN3-203ENST00000393287 C1orf167Q5SNV9 1468 aa9.8□□□□□ -0.84
ATXN3-203ENST00000393287 RALYLQ86SE5 291 aaKnown RBP9.8□□□□□ -0.84
ATXN3-203ENST00000393287 UNC5CLQ8IV45 518 aa9.8□□□□□ -0.84
ATXN3-203ENST00000393287 BRMS1Q9HCU9 246 aa9.8□□□□□ -0.84
ATXN3-203ENST00000393287 H3BQV1 296 aa9.8□□□□□ -0.84
ATXN3-203ENST00000393287 WASHC4Q2M389 1173 aa9.8□□□□□ -0.84
ATXN3-203ENST00000393287 IFFO2Q5TF58 517 aa9.8□□□□□ -0.84
ATXN3-203ENST00000393287 NYXQ9GZU5 481 aa9.8□□□□□ -0.84
ATXN3-203ENST00000393287 MYL6BP14649 208 aa9.79□□□□□ -0.84
ATXN3-203ENST00000393287 TCEAL9Q9UHQ7 104 aa9.79□□□□□ -0.84
ATXN3-203ENST00000393287 KIAA0232Q92628 1395 aa9.79□□□□□ -0.84
ATXN3-203ENST00000393287 PPRC1Q5VV67 1664 aaKnown RBP9.79□□□□□ -0.84
ATXN3-203ENST00000393287 FSD1Q9BTV5 496 aa9.79□□□□□ -0.84
ATXN3-203ENST00000393287 ALKQ9UM73 1620 aa9.79□□□□□ -0.84
ATXN3-203ENST00000393287 CLTCL1P53675 1640 aa9.79□□□□□ -0.84
ATXN3-203ENST00000393287 CCDC47Q96A33 483 aaKnown RBP9.79□□□□□ -0.84
ATXN3-203ENST00000393287 SPHKAPQ2M3C7 1700 aa9.79□□□□□ -0.84
ATXN3-203ENST00000393287 CHAF1AQ13111 956 aaPredicted RBP9.79□□□□□ -0.84
ATXN3-203ENST00000393287 RPGRQ92834 1020 aaKnown RBP9.78□□□□□ -0.84
ATXN3-203ENST00000393287 ZNF287Q9HBT7 754 aa9.78□□□□□ -0.84
ATXN3-203ENST00000393287 CEP126Q9P2H0 1117 aa9.78□□□□□ -0.84
ATXN3-203ENST00000393287 HSPA1LP34931 641 aa9.78□□□□□ -0.84
ATXN3-203ENST00000393287 CARD10Q9BWT7 1032 aa9.78□□□□□ -0.84
ATXN3-203ENST00000393287 AATKQ6ZMQ8 1374 aa9.78□□□□□ -0.84
ATXN3-203ENST00000393287 MCM2P49736 904 aa9.78□□□□□ -0.84
ATXN3-203ENST00000393287 ARHGAP45Q92619 1136 aa9.78□□□□□ -0.84
ATXN3-203ENST00000393287 PPP1R1BQ9UD71 204 aaPredicted RBP9.78□□□□□ -0.84
ATXN3-203ENST00000393287 VWDEQ8N2E2 1590 aa9.78□□□□□ -0.84
ATXN3-203ENST00000393287 CDC5LQ99459 802 aaKnown RBP9.78□□□□□ -0.84
ATXN3-203ENST00000393287 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.78□□□□□ -0.843e-6■■□□□ 13.5
ATXN3-203ENST00000393287 TMOD2Q9NZR1 351 aa9.78□□□□□ -0.84
ATXN3-203ENST00000393287 WDR17Q8IZU2 1322 aa9.78□□□□□ -0.84
ATXN3-203ENST00000393287 CPLX1O14810 134 aa9.77□□□□□ -0.84
ATXN3-203ENST00000393287 CAVIN4Q5BKX8 364 aa9.77□□□□□ -0.84
ATXN3-203ENST00000393287 NFXL1Q6ZNB6 911 aa9.77□□□□□ -0.84
ATXN3-203ENST00000393287 AEBP1Q8IUX7 1158 aa9.77□□□□□ -0.84
ATXN3-203ENST00000393287 DCCP43146 1447 aa9.77□□□□□ -0.84
ATXN3-203ENST00000393287 PLIN1O60240 522 aa9.77□□□□□ -0.84
ATXN3-203ENST00000393287 RASSF8Q8NHQ8 419 aa9.77□□□□□ -0.84
ATXN3-203ENST00000393287 TSR2Q969E8 191 aaKnown RBP9.77□□□□□ -0.84
ATXN3-203ENST00000393287 IFIT1P09914 478 aaKnown RBP9.77□□□□□ -0.85
ATXN3-203ENST00000393287 HOOK1Q9UJC3 728 aaKnown RBP9.77□□□□□ -0.85
ATXN3-203ENST00000393287 DNAAF4Q8WXU2 420 aa9.77□□□□□ -0.85
ATXN3-203ENST00000393287 CTNNA3Q9UI47 895 aa9.77□□□□□ -0.85
ATXN3-203ENST00000393287 RFC4P35249 363 aa9.77□□□□□ -0.85
ATXN3-203ENST00000393287 ARHGAP23Q9P227 1491 aa9.77□□□□□ -0.85
ATXN3-203ENST00000393287 ANKRD18BA2A2Z9 1011 aa9.77□□□□□ -0.85
ATXN3-203ENST00000393287 KIAA2012Q0VF49 1180 aa9.77□□□□□ -0.85
ATXN3-203ENST00000393287 SAFBQ15424 915 aaKnown RBP eCLIP9.77□□□□□ -0.85
ATXN3-203ENST00000393287 ACSBG1Q96GR2 724 aa9.77□□□□□ -0.85
ATXN3-203ENST00000393287 STK32BQ9NY57 414 aa9.77□□□□□ -0.85
ATXN3-203ENST00000393287 TNS3Q68CZ2 1445 aa9.76□□□□□ -0.85
ATXN3-203ENST00000393287 DHX16O60231 1041 aaKnown RBP9.76□□□□□ -0.85
ATXN3-203ENST00000393287 PDIA4P13667 645 aaKnown RBP9.76□□□□□ -0.85
ATXN3-203ENST00000393287 NBPF6Q5VWK0 638 aa9.76□□□□□ -0.85
ATXN3-203ENST00000393287 NBPF4Q96M43 638 aa9.76□□□□□ -0.85
ATXN3-203ENST00000393287 TECPR2O15040 1411 aa9.76□□□□□ -0.85
ATXN3-203ENST00000393287 SLC5A1P13866 664 aa9.76□□□□□ -0.85
ATXN3-203ENST00000393287 THRAP3Q9Y2W1 955 aaKnown RBP9.76□□□□□ -0.85
ATXN3-203ENST00000393287 FAM196AQ6ZSG2 479 aa9.76□□□□□ -0.85
ATXN3-203ENST00000393287 RBM6P78332 1123 aaKnown RBP9.76□□□□□ -0.85
ATXN3-203ENST00000393287 PANK1Q8TE04 598 aa9.76□□□□□ -0.85
ATXN3-203ENST00000393287 CWC25Q9NXE8 425 aaPredicted RBP9.76□□□□□ -0.85
ATXN3-203ENST00000393287 DDX11L8A8MPP1 907 aa9.76□□□□□ -0.85
ATXN3-203ENST00000393287 POLD1P28340 1107 aa9.76□□□□□ -0.85
ATXN3-203ENST00000393287 MTHFSDQ2M296 383 aaKnown RBP9.76□□□□□ -0.85
ATXN3-203ENST00000393287 FBXO41Q8TF61 875 aa9.76□□□□□ -0.85
ATXN3-203ENST00000393287 THUMPD2Q9BTF0 503 aaKnown RBP9.76□□□□□ -0.85
ATXN3-203ENST00000393287 FANCIQ9NVI1 1328 aa9.76□□□□□ -0.85
ATXN3-203ENST00000393287 FAM177BA6PVY3 158 aa9.75□□□□□ -0.85
ATXN3-203ENST00000393287 HOXB7P09629 217 aa9.75□□□□□ -0.85
ATXN3-203ENST00000393287 IL13P35225 146 aa9.75□□□□□ -0.85
ATXN3-203ENST00000393287 ANKRD1Q15327 319 aa9.75□□□□□ -0.85
ATXN3-203ENST00000393287 SETD1BQ9UPS6 1966 aaKnown RBP9.75□□□□□ -0.85
ATXN3-203ENST00000393287 AFF2P51816 1311 aa9.75□□□□□ -0.85
ATXN3-203ENST00000393287 ALDH1L1O75891 902 aa9.75□□□□□ -0.85
ATXN3-203ENST00000393287 ATP6V1AP38606 617 aa9.75□□□□□ -0.85
ATXN3-203ENST00000393287 DCTN1Q14203 1278 aa9.75□□□□□ -0.85
ATXN3-203ENST00000393287 SLIT1O75093 1534 aa9.75□□□□□ -0.85
ATXN3-203ENST00000393287 LRRIQ1Q96JM4 1722 aa9.75□□□□□ -0.85
ATXN3-203ENST00000393287 CDC42BPGQ6DT37 1551 aa9.75□□□□□ -0.85
ATXN3-203ENST00000393287 TAOK2Q9UL54 1235 aa9.75□□□□□ -0.85
ATXN3-203ENST00000393287 DLC1Q96QB1 1528 aa9.75□□□□□ -0.85
ATXN3-203ENST00000393287 TPM2P07951 284 aa9.74□□□□□ -0.85
ATXN3-203ENST00000393287 SF3A1Q15459 793 aaKnown RBP9.74□□□□□ -0.85
ATXN3-203ENST00000393287 SKOR2Q2VWA4 1001 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms