RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 DEKP35659 375 aaKnown RBP18.96■□□□□ 0.63
MKS1-202ENST00000393119 NFATC2IPQ8NCF5 419 aa18.96■□□□□ 0.63
MKS1-202ENST00000393119 LMO7Q8WWI1 1683 aa18.95■□□□□ 0.62
MKS1-202ENST00000393119 SIRT2Q8IXJ6 389 aa18.95■□□□□ 0.62
MKS1-202ENST00000393119 HDGFL1Q5TGJ6 251 aa18.95■□□□□ 0.62
MKS1-202ENST00000393119 RWDD1Q9H446 243 aaPredicted RBP18.95■□□□□ 0.62
MKS1-202ENST00000393119 KDM6AO15550 1401 aaPredicted RBP18.94■□□□□ 0.62
MKS1-202ENST00000393119 WDR17Q8IZU2 1322 aa18.94■□□□□ 0.62
MKS1-202ENST00000393119 LTBP4Q8N2S1 1624 aa18.94■□□□□ 0.62
MKS1-202ENST00000393119 EVA1CP58658 441 aa18.93■□□□□ 0.62
MKS1-202ENST00000393119 MEIS3Q99687 375 aa18.93■□□□□ 0.62
MKS1-202ENST00000393119 STK31Q9BXU1 1019 aa18.93■□□□□ 0.62
MKS1-202ENST00000393119 BTG4Q9NY30 223 aa18.93■□□□□ 0.62
MKS1-202ENST00000393119 COL5A2P05997 1499 aaPredicted RBP18.92■□□□□ 0.62
MKS1-202ENST00000393119 FLIIQ13045 1269 aa18.92■□□□□ 0.62
MKS1-202ENST00000393119 CCDC30Q5VVM6 783 aa18.92■□□□□ 0.62
MKS1-202ENST00000393119 CHPF2Q9P2E5 772 aa18.92■□□□□ 0.62
MKS1-202ENST00000393119 FKBP5Q13451 457 aaPredicted RBP18.92■□□□□ 0.62
MKS1-202ENST00000393119 SPG7Q9UQ90 795 aa18.92■□□□□ 0.62
MKS1-202ENST00000393119 PROSER3Q2NL68 480 aa18.91■□□□□ 0.62
MKS1-202ENST00000393119 BACH2Q9BYV9 841 aa18.91■□□□□ 0.62
MKS1-202ENST00000393119 ROBO1Q9Y6N7 1651 aa18.91■□□□□ 0.62
MKS1-202ENST00000393119 NHSL1Q5SYE7 1610 aa18.91■□□□□ 0.62
MKS1-202ENST00000393119 INTS3Q68E01 1043 aaKnown RBP18.91■□□□□ 0.62
MKS1-202ENST00000393119 DDX54Q8TDD1 881 aaKnown RBP18.91■□□□□ 0.62
MKS1-202ENST00000393119 NPM2Q86SE8 214 aaKnown RBP18.9■□□□□ 0.62
MKS1-202ENST00000393119 IFNL2Q8IZJ0 200 aa18.9■□□□□ 0.62
MKS1-202ENST00000393119 ADAMTS2O95450 1211 aa18.9■□□□□ 0.62
MKS1-202ENST00000393119 PIP4K2AP48426 406 aaPredicted RBP18.9■□□□□ 0.62
MKS1-202ENST00000393119 HDAC1Q13547 482 aaPredicted RBP18.89■□□□□ 0.61
MKS1-202ENST00000393119 AAMPQ13685 434 aa18.89■□□□□ 0.61
MKS1-202ENST00000393119 SLC52A2Q9HAB3 445 aa18.89■□□□□ 0.61
MKS1-202ENST00000393119 PTPRCP08575 1304 aa18.89■□□□□ 0.61
MKS1-202ENST00000393119 BABAM1Q9NWV8 329 aa18.89■□□□□ 0.61
MKS1-202ENST00000393119 GIGYF1O75420 1035 aaPredicted RBP18.88■□□□□ 0.61
MKS1-202ENST00000393119 NOP58Q9Y2X3 529 aaKnown RBP18.88■□□□□ 0.61
MKS1-202ENST00000393119 ABCA3Q99758 1704 aa18.87■□□□□ 0.61
MKS1-202ENST00000393119 NUTM2BA6NNL0 878 aaPredicted RBP18.87■□□□□ 0.61
MKS1-202ENST00000393119 NUTM2EB1AL46 878 aaPredicted RBP18.87■□□□□ 0.61
MKS1-202ENST00000393119 C8orf34Q49A92 452 aa18.87■□□□□ 0.61
MKS1-202ENST00000393119 NUTM2AQ8IVF1 878 aaPredicted RBP18.87■□□□□ 0.61
MKS1-202ENST00000393119 ZCRB1Q8TBF4 217 aaKnown RBP18.86■□□□□ 0.61
MKS1-202ENST00000393119 ZNF790Q6PG37 636 aa18.86■□□□□ 0.61
MKS1-202ENST00000393119 ZNF496Q96IT1 587 aaPredicted RBP18.85■□□□□ 0.61
MKS1-202ENST00000393119 LNPKQ9C0E8 428 aa18.85■□□□□ 0.61
MKS1-202ENST00000393119 CARD10Q9BWT7 1032 aa18.85■□□□□ 0.61
MKS1-202ENST00000393119 IL2RBP14784 551 aa18.84■□□□□ 0.61
MKS1-202ENST00000393119 SMC5Q8IY18 1101 aa18.84■□□□□ 0.61
MKS1-202ENST00000393119 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.84■□□□□ 0.61
MKS1-202ENST00000393119 OVOS2A0A0G2JMS6 1433 aa18.84■□□□□ 0.61
MKS1-202ENST00000393119 KDM3BQ7LBC6 1761 aa18.83■□□□□ 0.61
MKS1-202ENST00000393119 DCAF5Q96JK2 942 aa18.83■□□□□ 0.61
MKS1-202ENST00000393119 APBB1O00213 710 aa18.83■□□□□ 0.6
MKS1-202ENST00000393119 PI4KAP2A4QPH2 592 aa18.82■□□□□ 0.6
MKS1-202ENST00000393119 SEC24BO95487 1268 aa18.82■□□□□ 0.6
MKS1-202ENST00000393119 CABP4P57796 275 aa18.82■□□□□ 0.6
MKS1-202ENST00000393119 PI4KAP1Q8N8J0 262 aa18.82■□□□□ 0.6
MKS1-202ENST00000393119 USP16Q9Y5T5 823 aa18.82■□□□□ 0.6
MKS1-202ENST00000393119 VIRMAQ69YN4 1812 aaKnown RBP18.82■□□□□ 0.6
MKS1-202ENST00000393119 AIMP1Q12904 312 aaKnown RBP18.82■□□□□ 0.6
MKS1-202ENST00000393119 ANKRD45Q5TZF3 282 aa18.82■□□□□ 0.6
MKS1-202ENST00000393119 HEG1Q9ULI3 1381 aa18.81■□□□□ 0.6
MKS1-202ENST00000393119 MYL6BP14649 208 aa18.81■□□□□ 0.6
MKS1-202ENST00000393119 CEP85Q6P2H3 762 aa18.81■□□□□ 0.6
MKS1-202ENST00000393119 FAM161AQ3B820 660 aa18.8■□□□□ 0.6
MKS1-202ENST00000393119 PDIA6Q15084 440 aa18.79■□□□□ 0.6
MKS1-202ENST00000393119 ATP10DQ9P241 1426 aa18.79■□□□□ 0.6
MKS1-202ENST00000393119 UBAP1LF5GYI3 381 aa18.79■□□□□ 0.6
MKS1-202ENST00000393119 NUCB1Q02818 461 aa18.79■□□□□ 0.6
MKS1-202ENST00000393119 ABCC6O95255 1503 aa18.79■□□□□ 0.6
MKS1-202ENST00000393119 PRKCSHP14314 528 aaPredicted RBP18.78■□□□□ 0.6
MKS1-202ENST00000393119 CCT4P50991 539 aaKnown RBP18.78■□□□□ 0.6
MKS1-202ENST00000393119 C16orf71Q8IYS4 520 aaPredicted RBP18.78■□□□□ 0.6
MKS1-202ENST00000393119 PCDH11XQ9BZA7 1347 aa18.78■□□□□ 0.6
MKS1-202ENST00000393119 PCDH11YQ9BZA8 1340 aa18.78■□□□□ 0.6
MKS1-202ENST00000393119 PTCD1O75127 700 aaKnown RBP18.77■□□□□ 0.6
MKS1-202ENST00000393119 CHD1LQ86WJ1 897 aa18.77■□□□□ 0.6
MKS1-202ENST00000393119 USP44Q9H0E7 712 aa18.77■□□□□ 0.6
MKS1-202ENST00000393119 ADAMTS7Q9UKP4 1686 aa18.77■□□□□ 0.6
MKS1-202ENST00000393119 SIPA1L3O60292 1781 aaPredicted RBP18.77■□□□□ 0.6
MKS1-202ENST00000393119 SMARCA5O60264 1052 aaPredicted RBP18.77■□□□□ 0.6
MKS1-202ENST00000393119 ANKRD44Q8N8A2 993 aa18.77■□□□□ 0.6
MKS1-202ENST00000393119 DBF4Q9UBU7 674 aaPredicted RBP18.77■□□□□ 0.6
MKS1-202ENST00000393119 ADCY9O60503 1353 aa18.77■□□□□ 0.59
MKS1-202ENST00000393119 HOXB7P09629 217 aa18.76■□□□□ 0.59
MKS1-202ENST00000393119 TTC5Q8N0Z6 440 aa18.76■□□□□ 0.59
MKS1-202ENST00000393119 NBPF7P0C2Y1 421 aaPredicted RBP18.76■□□□□ 0.59
MKS1-202ENST00000393119 AHDC1Q5TGY3 1603 aaPredicted RBP18.76■□□□□ 0.59
MKS1-202ENST00000393119 SCN11AQ9UI33 1791 aa18.76■□□□□ 0.59
MKS1-202ENST00000393119 PKD1L3Q7Z443 1732 aa18.75■□□□□ 0.59
MKS1-202ENST00000393119 PNMA6EA0A0J9YXQ4 647 aa18.75■□□□□ 0.59
MKS1-202ENST00000393119 TOM1O60784 492 aa18.75■□□□□ 0.59
MKS1-202ENST00000393119 MAP3K2Q9Y2U5 619 aa18.75■□□□□ 0.59
MKS1-202ENST00000393119 LRRFIP2Q9Y608 721 aaKnown RBP18.75■□□□□ 0.59
MKS1-202ENST00000393119 SOS1Q07889 1333 aaPredicted RBP18.75■□□□□ 0.59
MKS1-202ENST00000393119 CWF19L2Q2TBE0 894 aaKnown RBP18.75■□□□□ 0.59
MKS1-202ENST00000393119 OTUD7AQ8TE49 926 aaPredicted RBP18.75■□□□□ 0.59
MKS1-202ENST00000393119 COL16A1Q07092 1604 aaPredicted RBP18.74■□□□□ 0.59
MKS1-202ENST00000393119 BEND3Q5T5X7 828 aa18.74■□□□□ 0.59
MKS1-202ENST00000393119 DNAAF4Q8WXU2 420 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms