RNA–Protein interactions for RNA: ENST00000392396.7

TFRC-202, Transcript of transferrin receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TFRC, Length 5,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-202ENST00000392396 TNIP1Q15025 636 aa21.41■■□□□ 1.02
TFRC-202ENST00000392396 CDKL5O76039 1030 aa21.4■■□□□ 1.02
TFRC-202ENST00000392396 BTG4Q9NY30 223 aa21.4■■□□□ 1.02
TFRC-202ENST00000392396 MCM2P49736 904 aa21.4■■□□□ 1.02
TFRC-202ENST00000392396 OFD1O75665 1012 aa21.4■■□□□ 1.02
TFRC-202ENST00000392396 NUP160Q12769 1436 aa21.4■■□□□ 1.02
TFRC-202ENST00000392396 DCTN1Q14203 1278 aa21.39■■□□□ 1.02
TFRC-202ENST00000392396 FEZ1Q99689 392 aa21.39■■□□□ 1.02
TFRC-202ENST00000392396 ANKRD36BQ8N2N9 1353 aa21.39■■□□□ 1.02
TFRC-202ENST00000392396 KIF1BPQ96EK5 621 aa21.39■■□□□ 1.01
TFRC-202ENST00000392396 BAG3O95817 575 aa21.38■■□□□ 1.01
TFRC-202ENST00000392396 CABP5Q9NP86 173 aa21.38■■□□□ 1.01
TFRC-202ENST00000392396 NOL7Q9UMY1 257 aaKnown RBP21.38■■□□□ 1.01
TFRC-202ENST00000392396 KDM4AO75164 1064 aa21.38■■□□□ 1.01
TFRC-202ENST00000392396 TRPM2O94759 1503 aa21.38■■□□□ 1.01
TFRC-202ENST00000392396 GOLGA6L3A6NEY3 463 aa21.38■■□□□ 1.01
TFRC-202ENST00000392396 TPTE2Q6XPS3 522 aa21.38■■□□□ 1.01
TFRC-202ENST00000392396 JMYQ8N9B5 988 aa21.38■■□□□ 1.01
TFRC-202ENST00000392396 RAB11FIP3O75154 756 aa21.38■■□□□ 1.01
TFRC-202ENST00000392396 CDCA7LQ96GN5 454 aa21.38■■□□□ 1.01
TFRC-202ENST00000392396 CYP46A1Q9Y6A2 500 aa21.38■■□□□ 1.01
TFRC-202ENST00000392396 PPIP5K1Q6PFW1 1433 aa21.38■■□□□ 1.01
TFRC-202ENST00000392396 ITSN2Q9NZM3 1697 aa21.37■■□□□ 1.01
TFRC-202ENST00000392396 THUMPD2Q9BTF0 503 aaKnown RBP21.37■■□□□ 1.01
TFRC-202ENST00000392396 HLA-DOAP06340 250 aa21.37■■□□□ 1.01
TFRC-202ENST00000392396 KRT32Q14532 448 aa21.37■■□□□ 1.01
TFRC-202ENST00000392396 IMMTQ16891 758 aaKnown RBP21.37■■□□□ 1.01
TFRC-202ENST00000392396 CCDC70Q6NSX1 233 aa21.37■■□□□ 1.01
TFRC-202ENST00000392396 ZNF444Q8N0Y2 327 aaPredicted RBP21.37■■□□□ 1.01
TFRC-202ENST00000392396 LDHAL6AQ6ZMR3 332 aa21.37■■□□□ 1.01
TFRC-202ENST00000392396 SLAIN2Q9P270 581 aa21.37■■□□□ 1.01
TFRC-202ENST00000392396 KIAA0556O60303 1618 aa21.36■■□□□ 1.01
TFRC-202ENST00000392396 OLFM4Q6UX06 510 aa21.36■■□□□ 1.01
TFRC-202ENST00000392396 GCP02774 474 aa21.36■■□□□ 1.01
TFRC-202ENST00000392396 LMOD1P29536 600 aaPredicted RBP21.36■■□□□ 1.01
TFRC-202ENST00000392396 IPO9Q96P70 1041 aaKnown RBP21.36■■□□□ 1.01
TFRC-202ENST00000392396 USP21Q9UK80 565 aa21.36■■□□□ 1.01
TFRC-202ENST00000392396 BCAR3O75815 825 aa21.35■■□□□ 1.01
TFRC-202ENST00000392396 C22orf23Q9BZE7 217 aa21.35■■□□□ 1.01
TFRC-202ENST00000392396 SASS6Q6UVJ0 657 aa21.35■■□□□ 1.01
TFRC-202ENST00000392396 SEC63Q9UGP8 760 aaKnown RBP21.35■■□□□ 1.01
TFRC-202ENST00000392396 RBM19Q9Y4C8 960 aaKnown RBP21.35■■□□□ 1.01
TFRC-202ENST00000392396 ANKRD18AQ8IVF6 992 aa21.34■■□□□ 1.01
TFRC-202ENST00000392396 ZNF396Q96N95 335 aaPredicted RBP21.34■■□□□ 1.01
TFRC-202ENST00000392396 MVPQ14764 893 aaKnown RBP21.34■■□□□ 1.01
TFRC-202ENST00000392396 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.34■■□□□ 1.011e-6■■■■■ 37.6
TFRC-202ENST00000392396 AKAP4Q5JQC9 854 aa21.34■■□□□ 1.01
TFRC-202ENST00000392396 MPHOSPH6Q99547 160 aaKnown RBP21.34■■□□□ 1.01
TFRC-202ENST00000392396 SDF4Q9BRK5 362 aa21.34■■□□□ 1.01
TFRC-202ENST00000392396 BMP2KQ9NSY1 1161 aaPredicted RBP21.34■■□□□ 1.01
TFRC-202ENST00000392396 GSTO1P78417 241 aa21.33■■□□□ 1.01
TFRC-202ENST00000392396 ALDH1L2Q3SY69 923 aa21.33■■□□□ 1.01
TFRC-202ENST00000392396 NAPBQ9H115 298 aa21.33■■□□□ 1.01
TFRC-202ENST00000392396 WASF1Q92558 559 aa21.33■■□□□ 1
TFRC-202ENST00000392396 IL1RAPL2Q9NP60 686 aa21.33■■□□□ 1
TFRC-202ENST00000392396 TRAPPC3LQ5T215 181 aa21.32■■□□□ 1
TFRC-202ENST00000392396 PCDH11XQ9BZA7 1347 aa21.32■■□□□ 1
TFRC-202ENST00000392396 PCDH11YQ9BZA8 1340 aa21.32■■□□□ 1
TFRC-202ENST00000392396 ARHGEF10O15013 1369 aa21.32■■□□□ 1
TFRC-202ENST00000392396 GRM1Q13255 1194 aa21.32■■□□□ 1
TFRC-202ENST00000392396 EYA3Q99504 573 aa21.32■■□□□ 1
TFRC-202ENST00000392396 GLRX3O76003 335 aaKnown RBP21.32■■□□□ 1
TFRC-202ENST00000392396 MINDY4BA8MYZ0 360 aa21.31■■□□□ 1
TFRC-202ENST00000392396 MYCNP04198 464 aaPredicted RBP21.31■■□□□ 1
TFRC-202ENST00000392396 TRIM21P19474 475 aaKnown RBP21.31■■□□□ 1
TFRC-202ENST00000392396 PIP4K2AP48426 406 aaPredicted RBP21.31■■□□□ 1
TFRC-202ENST00000392396 EHMT1Q9H9B1 1298 aa21.31■■□□□ 1
TFRC-202ENST00000392396 NIP7Q9Y221 180 aaKnown RBP eCLIP21.31■■□□□ 1
TFRC-202ENST00000392396 KIF21AQ7Z4S6 1674 aa21.31■■□□□ 1
TFRC-202ENST00000392396 RNF41Q9H4P4 317 aaPredicted RBP21.31■■□□□ 1
TFRC-202ENST00000392396 NEO1Q92859 1461 aa21.31■■□□□ 1
TFRC-202ENST00000392396 NEK4P51957 841 aa21.31■■□□□ 1
TFRC-202ENST00000392396 TTF1Q15361 905 aaPredicted RBP21.31■■□□□ 1
TFRC-202ENST00000392396 ANKRD13DQ6ZTN6 518 aa21.31■■□□□ 1
TFRC-202ENST00000392396 ZGPATQ8N5A5 531 aaKnown RBP21.31■■□□□ 1
TFRC-202ENST00000392396 CUL5Q93034 780 aa21.31■■□□□ 1
TFRC-202ENST00000392396 CCDC96Q2M329 555 aa21.3■■□□□ 1
TFRC-202ENST00000392396 ZFYVE27Q5T4F4 411 aa21.3■■□□□ 1
TFRC-202ENST00000392396 GOLGA6L1Q8N7Z2 621 aa21.3■■□□□ 1
TFRC-202ENST00000392396 BLOC1S2Q6QNY1 142 aa21.3■■□□□ 1
TFRC-202ENST00000392396 SCLT1Q96NL6 688 aa21.3■■□□□ 1
TFRC-202ENST00000392396 SIRT1Q96EB6 747 aa21.3■■□□□ 1
TFRC-202ENST00000392396 STK38Q15208 465 aa21.29■■□□□ 1
TFRC-202ENST00000392396 PPP4R3AQ6IN85 833 aa21.29■■□□□ 1
TFRC-202ENST00000392396 TMEM87AQ8NBN3 555 aa21.29■■□□□ 1
TFRC-202ENST00000392396 NAT10Q9H0A0 1025 aaKnown RBP21.29■■□□□ 1
TFRC-202ENST00000392396 IQCA1Q86XH1 822 aa21.29■■□□□ 1
TFRC-202ENST00000392396 DNAI2Q9GZS0 605 aa21.29■■□□□ 1
TFRC-202ENST00000392396 CCNL1Q9UK58 526 aaPredicted RBP21.29■■□□□ 1
TFRC-202ENST00000392396 U3KPZ7 1027 aaPredicted RBP21.29■■□□□ 1
TFRC-202ENST00000392396 SYCP1Q15431 976 aa21.29■■□□□ 1
TFRC-202ENST00000392396 DCAF5Q96JK2 942 aa21.29■■□□□ 1
TFRC-202ENST00000392396 ZC3H12CQ9C0D7 883 aaKnown RBP21.29■■□□□ 1
TFRC-202ENST00000392396 HSP90AB2PQ58FF8 381 aa21.29■■□□□ 1
TFRC-202ENST00000392396 MAP3K2Q9Y2U5 619 aa21.28■■□□□ 1
TFRC-202ENST00000392396 FLT4P35916 1363 aa21.28■■□□□ 1
TFRC-202ENST00000392396 FLIIQ13045 1269 aa21.28■■□□□ 1
TFRC-202ENST00000392396 UTP14AQ9BVJ6 771 aaKnown RBP21.28■■□□□ 1
TFRC-202ENST00000392396 ZHX3Q9H4I2 956 aa21.28■■□□□ 1
TFRC-202ENST00000392396 PDZRN3Q9UPQ7 1066 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms