RNA–Protein interactions for RNA: ENST00000392249.6

STRADB-202, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 1 (best) BASIC

Gene STRADB, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-202ENST00000392249 RPAP2Q8IXW5 612 aaPredicted RBP23.18■■□□□ 1.3
STRADB-202ENST00000392249 DCTPP1Q9H773 170 aa23.18■■□□□ 1.3
STRADB-202ENST00000392249 ERBB3P21860 1342 aa23.18■■□□□ 1.3
STRADB-202ENST00000392249 TEFQ10587 303 aa23.18■■□□□ 1.3
STRADB-202ENST00000392249 HDGFL1Q5TGJ6 251 aa23.18■■□□□ 1.3
STRADB-202ENST00000392249 KDM3BQ7LBC6 1761 aa23.18■■□□□ 1.3
STRADB-202ENST00000392249 C1orf141Q5JVX7 400 aa23.17■■□□□ 1.3
STRADB-202ENST00000392249 NPHP3Q7Z494 1330 aa23.17■■□□□ 1.3
STRADB-202ENST00000392249 MFAP1P55081 439 aaKnown RBP23.16■■□□□ 1.3
STRADB-202ENST00000392249 EIF4A1P60842 406 aaKnown RBP23.16■■□□□ 1.3
STRADB-202ENST00000392249 CABLES1Q8TDN4 633 aa23.16■■□□□ 1.3
STRADB-202ENST00000392249 KCNQ3O43525 872 aa23.15■■□□□ 1.3
STRADB-202ENST00000392249 BMP2KLQ5H9B9 411 aa23.15■■□□□ 1.3
STRADB-202ENST00000392249 BTBD11A6QL63 1104 aa23.14■■□□□ 1.3
STRADB-202ENST00000392249 BCL11AQ9H165 835 aa23.14■■□□□ 1.3
STRADB-202ENST00000392249 XIRP1Q702N8 1843 aaKnown RBP23.14■■□□□ 1.29
STRADB-202ENST00000392249 RNMTO43148 476 aaKnown RBP23.14■■□□□ 1.29
STRADB-202ENST00000392249 TNS3Q68CZ2 1445 aa23.14■■□□□ 1.29
STRADB-202ENST00000392249 EIF2S2P20042 333 aaKnown RBP23.13■■□□□ 1.29
STRADB-202ENST00000392249 PHAXQ9H814 394 aaKnown RBP23.12■■□□□ 1.29
STRADB-202ENST00000392249 NLRP2Q9NX02 1062 aa23.11■■□□□ 1.29
STRADB-202ENST00000392249 LMTK3Q96Q04 1460 aa23.1■■□□□ 1.29
STRADB-202ENST00000392249 HOXB7P09629 217 aa23.1■■□□□ 1.29
STRADB-202ENST00000392249 C22orf23Q9BZE7 217 aa23.1■■□□□ 1.29
STRADB-202ENST00000392249 STRCQ7RTU9 1775 aa23.09■■□□□ 1.29
STRADB-202ENST00000392249 APBB1O00213 710 aa23.09■■□□□ 1.29
STRADB-202ENST00000392249 GNAI2P04899 355 aa23.09■■□□□ 1.29
STRADB-202ENST00000392249 OVOS2A0A0G2JMS6 1433 aa23.09■■□□□ 1.29
STRADB-202ENST00000392249 COL18A1P39060 1754 aa23.09■■□□□ 1.29
STRADB-202ENST00000392249 N4BP2Q86UW6 1770 aaPredicted RBP23.09■■□□□ 1.29
STRADB-202ENST00000392249 SPATA31A3Q5VYP0 1347 aa23.08■■□□□ 1.29
STRADB-202ENST00000392249 HMMRO75330 724 aa23.08■■□□□ 1.29
STRADB-202ENST00000392249 BECN1Q14457 450 aa23.08■■□□□ 1.29
STRADB-202ENST00000392249 CHRNA2Q15822 529 aa23.08■■□□□ 1.29
STRADB-202ENST00000392249 PLEKHM2Q8IWE5 1019 aa23.08■■□□□ 1.29
STRADB-202ENST00000392249 RAPGEF4Q8WZA2 1011 aa23.08■■□□□ 1.29
STRADB-202ENST00000392249 CHPF2Q9P2E5 772 aa23.08■■□□□ 1.29
STRADB-202ENST00000392249 PXDNLA1KZ92 1463 aa23.08■■□□□ 1.28
STRADB-202ENST00000392249 C16orf71Q8IYS4 520 aaPredicted RBP23.07■■□□□ 1.28
STRADB-202ENST00000392249 CRYBG1Q9Y4K1 1723 aa23.07■■□□□ 1.28
STRADB-202ENST00000392249 KDM4FA0A1W2PPD8 638 aa23.07■■□□□ 1.28
STRADB-202ENST00000392249 SMARCA5O60264 1052 aaPredicted RBP23.06■■□□□ 1.28
STRADB-202ENST00000392249 GNAI3P08754 354 aa23.06■■□□□ 1.28
STRADB-202ENST00000392249 CSB-PGBD3P0DP91 1061 aa23.06■■□□□ 1.28
STRADB-202ENST00000392249 RTL5Q5HYW3 569 aaPredicted RBP23.06■■□□□ 1.28
STRADB-202ENST00000392249 BRINP3Q76B58 766 aa23.06■■□□□ 1.28
STRADB-202ENST00000392249 SIPA1L3O60292 1781 aaPredicted RBP23.05■■□□□ 1.28
STRADB-202ENST00000392249 GSPT1P15170 499 aaKnown RBP23.04■■□□□ 1.28
STRADB-202ENST00000392249 OTUD7AQ8TE49 926 aaPredicted RBP23.04■■□□□ 1.28
STRADB-202ENST00000392249 ANXA1P04083 346 aa23.04■■□□□ 1.28
STRADB-202ENST00000392249 MEGF6O75095 1541 aa23.04■■□□□ 1.28
STRADB-202ENST00000392249 CHMP4AQ9BY43 222 aa23.03■■□□□ 1.28
STRADB-202ENST00000392249 ZNF335Q9H4Z2 1342 aaPredicted RBP23.03■■□□□ 1.28
STRADB-202ENST00000392249 ADAMTS7Q9UKP4 1686 aa23.03■■□□□ 1.28
STRADB-202ENST00000392249 TATP17735 454 aaPredicted RBP23.03■■□□□ 1.28
STRADB-202ENST00000392249 TBC1D9Q6ZT07 1266 aa23.03■■□□□ 1.28
STRADB-202ENST00000392249 USP44Q9H0E7 712 aa23.02■■□□□ 1.28
STRADB-202ENST00000392249 LRRFIP2Q9Y608 721 aaKnown RBP23.02■■□□□ 1.28
STRADB-202ENST00000392249 GIGYF1O75420 1035 aaPredicted RBP23.01■■□□□ 1.27
STRADB-202ENST00000392249 TTC22Q5TAA0 569 aa23.01■■□□□ 1.27
STRADB-202ENST00000392249 PNMA6EA0A0J9YXQ4 647 aa23■■□□□ 1.27
STRADB-202ENST00000392249 TBC1D2Q9BYX2 928 aa23■■□□□ 1.27
STRADB-202ENST00000392249 EXOC6BQ9Y2D4 811 aa23■■□□□ 1.27
STRADB-202ENST00000392249 PRAMEF22A3QJZ6 481 aa23■■□□□ 1.27
STRADB-202ENST00000392249 UBTFL1P0CB47 393 aaPredicted RBP23■■□□□ 1.27
STRADB-202ENST00000392249 ABCC6O95255 1503 aa23■■□□□ 1.27
STRADB-202ENST00000392249 HEG1Q9ULI3 1381 aa22.99■■□□□ 1.27
STRADB-202ENST00000392249 PI4KAP2A4QPH2 592 aa22.99■■□□□ 1.27
STRADB-202ENST00000392249 PI4KAP1Q8N8J0 262 aa22.99■■□□□ 1.27
STRADB-202ENST00000392249 SRCIN1Q9C0H9 1055 aa22.99■■□□□ 1.27
STRADB-202ENST00000392249 DBF4Q9UBU7 674 aaPredicted RBP22.99■■□□□ 1.27
STRADB-202ENST00000392249 SPG7Q9UQ90 795 aa22.99■■□□□ 1.27
STRADB-202ENST00000392249 KDM6AO15550 1401 aaPredicted RBP22.99■■□□□ 1.27
STRADB-202ENST00000392249 CPDO75976 1380 aa22.99■■□□□ 1.27
STRADB-202ENST00000392249 SCN11AQ9UI33 1791 aa22.99■■□□□ 1.27
STRADB-202ENST00000392249 CDC45O75419 566 aa22.99■■□□□ 1.27
STRADB-202ENST00000392249 PHKG2P15735 406 aa22.99■■□□□ 1.27
STRADB-202ENST00000392249 DNAAF4Q8WXU2 420 aa22.99■■□□□ 1.27
STRADB-202ENST00000392249 ATP8B2P98198 1209 aa22.98■■□□□ 1.27
STRADB-202ENST00000392249 SLAIN2Q9P270 581 aa22.97■■□□□ 1.27
STRADB-202ENST00000392249 RBM25P49756 843 aaKnown RBP22.97■■□□□ 1.27
STRADB-202ENST00000392249 PROSER3Q2NL68 480 aa22.96■■□□□ 1.27
STRADB-202ENST00000392249 SLC52A2Q9HAB3 445 aa22.96■■□□□ 1.27
STRADB-202ENST00000392249 SLC39A6Q13433 755 aa22.96■■□□□ 1.27
STRADB-202ENST00000392249 BEND3Q5T5X7 828 aa22.96■■□□□ 1.27
STRADB-202ENST00000392249 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.96■■□□□ 1.27
STRADB-202ENST00000392249 ADCY9O60503 1353 aa22.96■■□□□ 1.27
STRADB-202ENST00000392249 IFNL2Q8IZJ0 200 aa22.95■■□□□ 1.26
STRADB-202ENST00000392249 SLKQ9H2G2 1235 aaPredicted RBP22.95■■□□□ 1.26
STRADB-202ENST00000392249 USP35Q9P2H5 1018 aa22.95■■□□□ 1.26
STRADB-202ENST00000392249 NFKBIBQ15653 356 aa22.94■■□□□ 1.26
STRADB-202ENST00000392249 ZNF790Q6PG37 636 aa22.94■■□□□ 1.26
STRADB-202ENST00000392249 NFATC2IPQ8NCF5 419 aa22.94■■□□□ 1.26
STRADB-202ENST00000392249 SOS2Q07890 1332 aaPredicted RBP22.93■■□□□ 1.26
STRADB-202ENST00000392249 NBPF7P0C2Y1 421 aaPredicted RBP22.93■■□□□ 1.26
STRADB-202ENST00000392249 LRRCC1Q9C099 1032 aa22.93■■□□□ 1.26
STRADB-202ENST00000392249 PRDM11Q9NQV5 511 aa22.93■■□□□ 1.26
STRADB-202ENST00000392249 CYP27B1O15528 508 aa22.92■■□□□ 1.26
STRADB-202ENST00000392249 IBTKQ9P2D0 1353 aaPredicted RBP22.92■■□□□ 1.26
STRADB-202ENST00000392249 PKD1L3Q7Z443 1732 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms