RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 BAG6P46379 1132 aa19.61■□□□□ 0.73
SUMO1-203ENST00000392246 TRIM35Q9UPQ4 493 aa19.6■□□□□ 0.73
SUMO1-203ENST00000392246 PLSCR1O15162 318 aa19.59■□□□□ 0.73
SUMO1-203ENST00000392246 NCBP3Q53F19 620 aaKnown RBP19.59■□□□□ 0.73
SUMO1-203ENST00000392246 SMARCC1Q92922 1105 aaPredicted RBP19.57■□□□□ 0.72
SUMO1-203ENST00000392246 SIPA1L3O60292 1781 aaPredicted RBP19.57■□□□□ 0.72
SUMO1-203ENST00000392246 EN1Q05925 392 aaPredicted RBP19.56■□□□□ 0.72
SUMO1-203ENST00000392246 DEFB132Q7Z7B7 95 aa19.56■□□□□ 0.72
SUMO1-203ENST00000392246 NGEFQ8N5V2 710 aa19.56■□□□□ 0.72
SUMO1-203ENST00000392246 THUMPD2Q9BTF0 503 aaKnown RBP19.56■□□□□ 0.72
SUMO1-203ENST00000392246 ASAP1Q9ULH1 1129 aa19.56■□□□□ 0.72
SUMO1-203ENST00000392246 SENP3-EIF4A1A0A087X0R7 540 aa19.56■□□□□ 0.72
SUMO1-203ENST00000392246 TAF7Q15545 349 aaPredicted RBP19.56■□□□□ 0.72
SUMO1-203ENST00000392246 CCDC27Q2M243 656 aa19.56■□□□□ 0.72
SUMO1-203ENST00000392246 ATG3Q9NT62 314 aa19.56■□□□□ 0.72
SUMO1-203ENST00000392246 RGPD3A6NKT7 1758 aaPredicted RBP19.55■□□□□ 0.72
SUMO1-203ENST00000392246 RGPD4Q7Z3J3 1758 aa19.55■□□□□ 0.72
SUMO1-203ENST00000392246 BTBD11A6QL63 1104 aa19.54■□□□□ 0.72
SUMO1-203ENST00000392246 CAMKK2Q96RR4 588 aa19.54■□□□□ 0.72
SUMO1-203ENST00000392246 PALLDQ8WX93 1383 aa19.54■□□□□ 0.72
SUMO1-203ENST00000392246 SALL2Q9Y467 1007 aaPredicted RBP19.53■□□□□ 0.72
SUMO1-203ENST00000392246 LY75O60449 1722 aa19.53■□□□□ 0.72
SUMO1-203ENST00000392246 CALD1Q05682 793 aaKnown RBP19.52■□□□□ 0.72
SUMO1-203ENST00000392246 SLC39A6Q13433 755 aa19.52■□□□□ 0.72
SUMO1-203ENST00000392246 EZH2Q15910 746 aaKnown RBP19.52■□□□□ 0.72
SUMO1-203ENST00000392246 WWC1Q8IX03 1113 aa19.52■□□□□ 0.72
SUMO1-203ENST00000392246 TXNRD1Q16881 649 aa19.51■□□□□ 0.71
SUMO1-203ENST00000392246 ZNF790Q6PG37 636 aa19.51■□□□□ 0.71
SUMO1-203ENST00000392246 TTC5Q8N0Z6 440 aa19.51■□□□□ 0.71
SUMO1-203ENST00000392246 PAPPAQ13219 1627 aa19.5■□□□□ 0.71
SUMO1-203ENST00000392246 SLC27A3Q5K4L6 730 aa19.5■□□□□ 0.71
SUMO1-203ENST00000392246 PROM2Q8N271 834 aa19.5■□□□□ 0.71
SUMO1-203ENST00000392246 BABAM1Q9NWV8 329 aa19.5■□□□□ 0.71
SUMO1-203ENST00000392246 LOC102724428A0A0B4J2F2 783 aa19.49■□□□□ 0.71
SUMO1-203ENST00000392246 SIK1P57059 783 aa19.49■□□□□ 0.71
SUMO1-203ENST00000392246 RBM42Q9BTD8 480 aaKnown RBP19.49■□□□□ 0.71
SUMO1-203ENST00000392246 MIS18AQ9NYP9 233 aa19.49■□□□□ 0.71
SUMO1-203ENST00000392246 PTCD1O75127 700 aaKnown RBP19.48■□□□□ 0.71
SUMO1-203ENST00000392246 CCNL1Q9UK58 526 aaPredicted RBP19.48■□□□□ 0.71
SUMO1-203ENST00000392246 WDR63Q8IWG1 891 aa19.47■□□□□ 0.71
SUMO1-203ENST00000392246 CFAP44Q96MT7 982 aa19.47■□□□□ 0.71
SUMO1-203ENST00000392246 TSPYL4Q9UJ04 414 aa19.47■□□□□ 0.71
SUMO1-203ENST00000392246 LAS1LQ9Y4W2 734 aaKnown RBP19.47■□□□□ 0.71
SUMO1-203ENST00000392246 UBR2Q8IWV8 1755 aa19.47■□□□□ 0.71
SUMO1-203ENST00000392246 RREB1Q92766 1687 aa19.47■□□□□ 0.71
SUMO1-203ENST00000392246 KDM3BQ7LBC6 1761 aa19.46■□□□□ 0.71
SUMO1-203ENST00000392246 CHL1O00533 1208 aa19.46■□□□□ 0.71
SUMO1-203ENST00000392246 KCNQ3O43525 872 aa19.46■□□□□ 0.71
SUMO1-203ENST00000392246 HMGB2P26583 209 aaKnown RBP19.46■□□□□ 0.71
SUMO1-203ENST00000392246 IFT57Q9NWB7 429 aa19.46■□□□□ 0.71
SUMO1-203ENST00000392246 ATP6V1AP38606 617 aa19.46■□□□□ 0.71
SUMO1-203ENST00000392246 GNAI1P63096 354 aa19.46■□□□□ 0.71
SUMO1-203ENST00000392246 LRRC4BQ9NT99 713 aa19.46■□□□□ 0.71
SUMO1-203ENST00000392246 KCPQ6ZWJ8 1503 aa19.45■□□□□ 0.7
SUMO1-203ENST00000392246 ZNF831Q5JPB2 1677 aa19.45■□□□□ 0.7
SUMO1-203ENST00000392246 ZNF496Q96IT1 587 aaPredicted RBP19.45■□□□□ 0.7
SUMO1-203ENST00000392246 FMNL2Q96PY5 1086 aa19.45■□□□□ 0.7
SUMO1-203ENST00000392246 IL16Q14005 1332 aa19.45■□□□□ 0.7
SUMO1-203ENST00000392246 ZNF853P0CG23 659 aa19.44■□□□□ 0.7
SUMO1-203ENST00000392246 KCNQ4P56696 695 aa19.44■□□□□ 0.7
SUMO1-203ENST00000392246 VSIG10Q8N0Z9 540 aa19.44■□□□□ 0.7
SUMO1-203ENST00000392246 SLC4A9Q96Q91 983 aa19.44■□□□□ 0.7
SUMO1-203ENST00000392246 HNRNPUQ00839 825 aaKnown RBP eCLIP19.43■□□□□ 0.7
SUMO1-203ENST00000392246 ZNF521Q96K83 1311 aa19.43■□□□□ 0.7
SUMO1-203ENST00000392246 TAF1LQ8IZX4 1826 aa19.43■□□□□ 0.7
SUMO1-203ENST00000392246 NUP188Q5SRE5 1749 aa19.42■□□□□ 0.7
SUMO1-203ENST00000392246 HEG1Q9ULI3 1381 aa19.42■□□□□ 0.7
SUMO1-203ENST00000392246 EIF4A1P60842 406 aaKnown RBP19.41■□□□□ 0.7
SUMO1-203ENST00000392246 ITPK1Q13572 414 aa19.41■□□□□ 0.7
SUMO1-203ENST00000392246 MBIPQ9NS73 344 aa19.41■□□□□ 0.7
SUMO1-203ENST00000392246 C5P01031 1676 aa19.4■□□□□ 0.7
SUMO1-203ENST00000392246 NBPF14Q5TI25 921 aa19.4■□□□□ 0.7
SUMO1-203ENST00000392246 TEX13AQ9BXU3 409 aaPredicted RBP19.4■□□□□ 0.7
SUMO1-203ENST00000392246 CICQ96RK0 1608 aaPredicted RBP19.39■□□□□ 0.69
SUMO1-203ENST00000392246 SNRPA1P09661 255 aaKnown RBP19.39■□□□□ 0.69
SUMO1-203ENST00000392246 GOLGA2Q08379 1002 aa19.39■□□□□ 0.69
SUMO1-203ENST00000392246 DNAJC10Q8IXB1 793 aa19.39■□□□□ 0.69
SUMO1-203ENST00000392246 TJP1Q07157 1748 aa19.39■□□□□ 0.69
SUMO1-203ENST00000392246 LINC00116Q8NCU8 138 aa19.38■□□□□ 0.69
SUMO1-203ENST00000392246 COL5A3P25940 1745 aaPredicted RBP19.37■□□□□ 0.69
SUMO1-203ENST00000392246 GIGYF1O75420 1035 aaPredicted RBP19.37■□□□□ 0.69
SUMO1-203ENST00000392246 STARD3NLO95772 234 aa19.36■□□□□ 0.69
SUMO1-203ENST00000392246 MYH16Q9H6N6 1097 aa19.36■□□□□ 0.69
SUMO1-203ENST00000392246 STK32BQ9NY57 414 aa19.36■□□□□ 0.69
SUMO1-203ENST00000392246 C4BP0C0L5 1744 aa19.36■□□□□ 0.69
SUMO1-203ENST00000392246 RC3H1Q5TC82 1133 aaKnown RBP19.35■□□□□ 0.69
SUMO1-203ENST00000392246 TSR2Q969E8 191 aaKnown RBP19.35■□□□□ 0.69
SUMO1-203ENST00000392246 AKT1S1Q96B36 256 aa19.35■□□□□ 0.69
SUMO1-203ENST00000392246 SPINK5Q9NQ38 1064 aaPredicted RBP19.35■□□□□ 0.69
SUMO1-203ENST00000392246 E9PSI1 815 aa19.35■□□□□ 0.69
SUMO1-203ENST00000392246 CYP19A1P11511 503 aaPredicted RBP19.35■□□□□ 0.69
SUMO1-203ENST00000392246 SLC15A2Q16348 729 aa19.35■□□□□ 0.69
SUMO1-203ENST00000392246 ANO8Q9HCE9 1232 aaPredicted RBP19.35■□□□□ 0.69
SUMO1-203ENST00000392246 USP16Q9Y5T5 823 aa19.35■□□□□ 0.69
SUMO1-203ENST00000392246 CNTNAP4Q9C0A0 1308 aa19.34■□□□□ 0.69
SUMO1-203ENST00000392246 FANCIQ9NVI1 1328 aa19.34■□□□□ 0.69
SUMO1-203ENST00000392246 MYH14Q7Z406 1995 aaKnown RBP19.34■□□□□ 0.69
SUMO1-203ENST00000392246 PRAMEF22A3QJZ6 481 aa19.34■□□□□ 0.69
SUMO1-203ENST00000392246 AK7Q96M32 723 aa19.34■□□□□ 0.69
SUMO1-203ENST00000392246 ZBED9Q6R2W3 1325 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms