RNA–Protein interactions for RNA: ENST00000391827.2

NLRP3-205, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-205ENST00000391827 RABEP1Q15276 862 aa13.34□□□□□ -0.27
NLRP3-205ENST00000391827 OTUD7AQ8TE49 926 aaPredicted RBP13.34□□□□□ -0.27
NLRP3-205ENST00000391827 KDM3BQ7LBC6 1761 aa13.34□□□□□ -0.27
NLRP3-205ENST00000391827 TUBGCP6Q96RT7 1819 aa13.34□□□□□ -0.27
NLRP3-205ENST00000391827 SDSP20132 328 aa13.34□□□□□ -0.27
NLRP3-205ENST00000391827 ADAMTSL3P82987 1691 aa13.34□□□□□ -0.27
NLRP3-205ENST00000391827 RAB3GAP1Q15042 981 aa13.34□□□□□ -0.27
NLRP3-205ENST00000391827 CASC1Q6TDU7 716 aa13.34□□□□□ -0.27
NLRP3-205ENST00000391827 SALL3Q9BXA9 1300 aa13.34□□□□□ -0.27
NLRP3-205ENST00000391827 USP26Q9BXU7 913 aa13.34□□□□□ -0.27
NLRP3-205ENST00000391827 SLIT3O75094 1523 aa13.33□□□□□ -0.27
NLRP3-205ENST00000391827 HOXB7P09629 217 aa13.33□□□□□ -0.27
NLRP3-205ENST00000391827 SLC4A10Q6U841 1118 aa13.33□□□□□ -0.27
NLRP3-205ENST00000391827 KCNH5Q8NCM2 988 aa13.33□□□□□ -0.27
NLRP3-205ENST00000391827 CD2BP2O95400 341 aaKnown RBP13.33□□□□□ -0.28
NLRP3-205ENST00000391827 NUTM2GQ5VZR2 741 aa13.33□□□□□ -0.28
NLRP3-205ENST00000391827 LMTK3Q96Q04 1460 aa13.33□□□□□ -0.28
NLRP3-205ENST00000391827 L1TD1Q5T7N2 865 aaKnown RBP13.33□□□□□ -0.28
NLRP3-205ENST00000391827 OVOS2A0A0G2JMS6 1433 aa13.32□□□□□ -0.28
NLRP3-205ENST00000391827 CAMTA1Q9Y6Y1 1673 aa13.32□□□□□ -0.28
NLRP3-205ENST00000391827 ATP8B2P98198 1209 aa13.32□□□□□ -0.28
NLRP3-205ENST00000391827 CHMP4AQ9BY43 222 aa13.32□□□□□ -0.28
NLRP3-205ENST00000391827 SMARCA5O60264 1052 aaPredicted RBP13.32□□□□□ -0.28
NLRP3-205ENST00000391827 FKBP5Q13451 457 aaPredicted RBP13.32□□□□□ -0.28
NLRP3-205ENST00000391827 IBTKQ9P2D0 1353 aaPredicted RBP13.31□□□□□ -0.28
NLRP3-205ENST00000391827 CLEC17AQ6ZS10 378 aa13.31□□□□□ -0.28
NLRP3-205ENST00000391827 PTMSP20962 102 aa13.31□□□□□ -0.28
NLRP3-205ENST00000391827 PDE1AP54750 535 aa13.31□□□□□ -0.28
NLRP3-205ENST00000391827 FSD2A1L4K1 749 aa13.3□□□□□ -0.28
NLRP3-205ENST00000391827 REC8O95072 547 aa13.3□□□□□ -0.28
NLRP3-205ENST00000391827 TRAK2O60296 914 aa13.3□□□□□ -0.28
NLRP3-205ENST00000391827 TNPO1Q92973 898 aaKnown RBP13.3□□□□□ -0.28
NLRP3-205ENST00000391827 RBM42Q9BTD8 480 aaKnown RBP13.3□□□□□ -0.28
NLRP3-205ENST00000391827 MST1RQ04912 1400 aa13.3□□□□□ -0.28
NLRP3-205ENST00000391827 GBP4Q96PP9 640 aa13.29□□□□□ -0.28
NLRP3-205ENST00000391827 LRRCC1Q9C099 1032 aa13.29□□□□□ -0.28
NLRP3-205ENST00000391827 NPHP4O75161 1426 aaPredicted RBP13.29□□□□□ -0.28
NLRP3-205ENST00000391827 NBPF6Q5VWK0 638 aa13.29□□□□□ -0.28
NLRP3-205ENST00000391827 LTV1Q96GA3 475 aaPredicted RBP13.29□□□□□ -0.28
NLRP3-205ENST00000391827 NBPF4Q96M43 638 aa13.29□□□□□ -0.28
NLRP3-205ENST00000391827 AOX1Q06278 1338 aa13.29□□□□□ -0.28
NLRP3-205ENST00000391827 HDGFL1Q5TGJ6 251 aa13.29□□□□□ -0.28
NLRP3-205ENST00000391827 STAP2Q9UGK3 403 aa13.29□□□□□ -0.28
NLRP3-205ENST00000391827 SETD1BQ9UPS6 1966 aaKnown RBP13.28□□□□□ -0.28
NLRP3-205ENST00000391827 ERC2O15083 957 aa13.28□□□□□ -0.28
NLRP3-205ENST00000391827 EIF4A1P60842 406 aaKnown RBP13.28□□□□□ -0.28
NLRP3-205ENST00000391827 USP44Q9H0E7 712 aa13.28□□□□□ -0.28
NLRP3-205ENST00000391827 ISY1Q9ULR0 285 aaKnown RBP13.28□□□□□ -0.28
NLRP3-205ENST00000391827 TRPM3Q9HCF6 1732 aaPredicted RBP13.28□□□□□ -0.28
NLRP3-205ENST00000391827 PSME1Q06323 249 aa13.28□□□□□ -0.28
NLRP3-205ENST00000391827 SRCIN1Q9C0H9 1055 aa13.28□□□□□ -0.28
NLRP3-205ENST00000391827 PNMA6EA0A0J9YXQ4 647 aa13.27□□□□□ -0.28
NLRP3-205ENST00000391827 AKAP4Q5JQC9 854 aa13.27□□□□□ -0.28
NLRP3-205ENST00000391827 USHBP1Q8N6Y0 703 aa13.27□□□□□ -0.28
NLRP3-205ENST00000391827 KIF1AQ12756 1690 aa13.27□□□□□ -0.29
NLRP3-205ENST00000391827 HSP90AA1P07900 732 aaKnown RBP13.27□□□□□ -0.29
NLRP3-205ENST00000391827 C14orf37Q86TY3 774 aa13.27□□□□□ -0.29
NLRP3-205ENST00000391827 SSH3Q8TE77 659 aa13.27□□□□□ -0.29
NLRP3-205ENST00000391827 RGPD2P0DJD1 1756 aa13.27□□□□□ -0.29
NLRP3-205ENST00000391827 ADAMTS7Q9UKP4 1686 aa13.27□□□□□ -0.29
NLRP3-205ENST00000391827 APBB1O00213 710 aa13.26□□□□□ -0.29
NLRP3-205ENST00000391827 AMOTQ4VCS5 1084 aa13.26□□□□□ -0.29
NLRP3-205ENST00000391827 ESCO1Q5FWF5 840 aa13.26□□□□□ -0.29
NLRP3-205ENST00000391827 EXOC6BQ9Y2D4 811 aa13.26□□□□□ -0.29
NLRP3-205ENST00000391827 MX1P20591 662 aa13.26□□□□□ -0.29
NLRP3-205ENST00000391827 SKOR2Q2VWA4 1001 aaPredicted RBP13.26□□□□□ -0.29
NLRP3-205ENST00000391827 ARHGEF25Q86VW2 580 aa13.26□□□□□ -0.29
NLRP3-205ENST00000391827 IL17RAQ96F46 866 aa13.26□□□□□ -0.29
NLRP3-205ENST00000391827 LRRFIP2Q9Y608 721 aaKnown RBP13.26□□□□□ -0.29
NLRP3-205ENST00000391827 UBTFL1P0CB47 393 aaPredicted RBP13.26□□□□□ -0.29
NLRP3-205ENST00000391827 GOLGA6L3A6NEY3 463 aa13.25□□□□□ -0.29
NLRP3-205ENST00000391827 EPB41L2O43491 1005 aaKnown RBP13.25□□□□□ -0.29
NLRP3-205ENST00000391827 POLA2Q14181 598 aa13.25□□□□□ -0.29
NLRP3-205ENST00000391827 PLEKHO1Q53GL0 409 aaPredicted RBP13.25□□□□□ -0.29
NLRP3-205ENST00000391827 RAB11FIP3O75154 756 aa13.25□□□□□ -0.29
NLRP3-205ENST00000391827 HEG1Q9ULI3 1381 aa13.25□□□□□ -0.29
NLRP3-205ENST00000391827 RRP9O43818 475 aaKnown RBP13.24□□□□□ -0.29
NLRP3-205ENST00000391827 ST18O60284 1047 aa13.24□□□□□ -0.29
NLRP3-205ENST00000391827 NECTIN2Q92692 538 aa13.24□□□□□ -0.29
NLRP3-205ENST00000391827 PHAXQ9H814 394 aaKnown RBP13.24□□□□□ -0.29
NLRP3-205ENST00000391827 LGR6Q9HBX8 967 aa13.24□□□□□ -0.29
NLRP3-205ENST00000391827 CWC22Q9HCG8 908 aaKnown RBP13.24□□□□□ -0.29
NLRP3-205ENST00000391827 SIPA1L3O60292 1781 aaPredicted RBP13.24□□□□□ -0.29
NLRP3-205ENST00000391827 GCP02774 474 aa13.23□□□□□ -0.29
NLRP3-205ENST00000391827 CYP2E1P05181 493 aaPredicted RBP13.23□□□□□ -0.29
NLRP3-205ENST00000391827 HSP90AA2PQ14568 343 aaPredicted RBP13.23□□□□□ -0.29
NLRP3-205ENST00000391827 TRHP20396 242 aaPredicted RBP13.23□□□□□ -0.29
NLRP3-205ENST00000391827 ESYT1Q9BSJ8 1104 aa13.23□□□□□ -0.29
NLRP3-205ENST00000391827 PXDNQ92626 1479 aa13.23□□□□□ -0.29
NLRP3-205ENST00000391827 NUCB2P80303 420 aa13.23□□□□□ -0.29
NLRP3-205ENST00000391827 BEND3Q5T5X7 828 aa13.23□□□□□ -0.29
NLRP3-205ENST00000391827 ZNF530Q6P9A1 599 aaPredicted RBP13.23□□□□□ -0.29
NLRP3-205ENST00000391827 ANAPC15P60006 121 aa13.22□□□□□ -0.29
NLRP3-205ENST00000391827 ABCC6O95255 1503 aa13.22□□□□□ -0.29
NLRP3-205ENST00000391827 RNMTO43148 476 aaKnown RBP13.22□□□□□ -0.29
NLRP3-205ENST00000391827 TEFQ10587 303 aa13.22□□□□□ -0.29
NLRP3-205ENST00000391827 DNAAF4Q8WXU2 420 aa13.22□□□□□ -0.29
NLRP3-205ENST00000391827 BTBD11A6QL63 1104 aa13.21□□□□□ -0.29
NLRP3-205ENST00000391827 CHMLP26374 656 aa13.21□□□□□ -0.29
NLRP3-205ENST00000391827 CHPF2Q9P2E5 772 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms