RNA–Protein interactions for RNA: ENST00000390444.1

TRAV16-201, Transcript of T cell receptor alpha variable 16, humanhuman

APPRIS P1 BASIC

Gene TRAV16, Length 329 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16-201ENST00000390444 NPHP3Q7Z494 1330 aa6.82□□□□□ -1.32
TRAV16-201ENST00000390444 PRIM1P49642 420 aaKnown RBP6.82□□□□□ -1.32
TRAV16-201ENST00000390444 RUNDC1Q96C34 613 aa6.82□□□□□ -1.32
TRAV16-201ENST00000390444 ORAI2Q96SN7 254 aa6.82□□□□□ -1.32
TRAV16-201ENST00000390444 GPBP1L1Q9HC44 474 aaPredicted RBP6.82□□□□□ -1.32
TRAV16-201ENST00000390444 ANO8Q9HCE9 1232 aaPredicted RBP6.82□□□□□ -1.32
TRAV16-201ENST00000390444 EMILIN1Q9Y6C2 1016 aa6.82□□□□□ -1.32
TRAV16-201ENST00000390444 ARHGEF10O15013 1369 aa6.82□□□□□ -1.32
TRAV16-201ENST00000390444 LRRC37A3O60309 1634 aa6.81□□□□□ -1.32
TRAV16-201ENST00000390444 PHF14O94880 888 aa6.81□□□□□ -1.32
TRAV16-201ENST00000390444 IL13P35225 146 aa6.81□□□□□ -1.32
TRAV16-201ENST00000390444 EN1Q05925 392 aaPredicted RBP6.81□□□□□ -1.32
TRAV16-201ENST00000390444 PSME1Q06323 249 aa6.81□□□□□ -1.32
TRAV16-201ENST00000390444 PDE4DQ08499 809 aa6.81□□□□□ -1.32
TRAV16-201ENST00000390444 ERICH6Q7L0X2 663 aa6.81□□□□□ -1.32
TRAV16-201ENST00000390444 ABTB2Q8N961 1025 aa6.81□□□□□ -1.32
TRAV16-201ENST00000390444 EPAS1Q99814 870 aa6.81□□□□□ -1.32
TRAV16-201ENST00000390444 PNNQ9H307 717 aaKnown RBP6.81□□□□□ -1.32
TRAV16-201ENST00000390444 DAXXQ9UER7 740 aaPredicted RBP6.81□□□□□ -1.32
TRAV16-201ENST00000390444 PCDHGA4Q9Y5G9 962 aa6.81□□□□□ -1.32
TRAV16-201ENST00000390444 MAP3K19Q56UN5 1328 aa6.8□□□□□ -1.32
TRAV16-201ENST00000390444 FOXO3O43524 673 aa6.8□□□□□ -1.32
TRAV16-201ENST00000390444 PHLPP1O60346 1717 aa6.8□□□□□ -1.32
TRAV16-201ENST00000390444 U2AF1L5P0DN76 240 aaPredicted RBP6.8□□□□□ -1.32
TRAV16-201ENST00000390444 U2AF1Q01081 240 aaKnown RBP eCLIP6.8□□□□□ -1.32
TRAV16-201ENST00000390444 PTGDRQ13258 359 aa6.8□□□□□ -1.32
TRAV16-201ENST00000390444 NCAPD2Q15021 1401 aa6.8□□□□□ -1.32
TRAV16-201ENST00000390444 RRS1Q15050 365 aaKnown RBP6.8□□□□□ -1.32
TRAV16-201ENST00000390444 CCDC27Q2M243 656 aa6.8□□□□□ -1.32
TRAV16-201ENST00000390444 CCDC146Q8IYE0 955 aa6.8□□□□□ -1.32
TRAV16-201ENST00000390444 KCNH5Q8NCM2 988 aa6.8□□□□□ -1.32
TRAV16-201ENST00000390444 PLEKHF1Q96S99 279 aa6.8□□□□□ -1.32
TRAV16-201ENST00000390444 KDM4CQ9H3R0 1056 aa6.8□□□□□ -1.32
TRAV16-201ENST00000390444 KDRP35968 1356 aa6.8□□□□□ -1.32
TRAV16-201ENST00000390444 SOS2Q07890 1332 aaPredicted RBP6.79□□□□□ -1.32
TRAV16-201ENST00000390444 APAF1O14727 1248 aa6.79□□□□□ -1.32
TRAV16-201ENST00000390444 FBLN1P23142 703 aa6.79□□□□□ -1.32
TRAV16-201ENST00000390444 AMHR2Q16671 573 aa6.79□□□□□ -1.32
TRAV16-201ENST00000390444 BRINP3Q76B58 766 aa6.79□□□□□ -1.32
TRAV16-201ENST00000390444 KRT28Q7Z3Y7 464 aa6.79□□□□□ -1.32
TRAV16-201ENST00000390444 RSPH6AQ9H0K4 717 aa6.79□□□□□ -1.32
TRAV16-201ENST00000390444 COL16A1Q07092 1604 aaPredicted RBP6.79□□□□□ -1.32
TRAV16-201ENST00000390444 PKD1L3Q7Z443 1732 aa6.79□□□□□ -1.32
TRAV16-201ENST00000390444 IGSF1Q8N6C5 1336 aa6.78□□□□□ -1.32
TRAV16-201ENST00000390444 MAPK8IP3Q9UPT6 1336 aa6.78□□□□□ -1.32
TRAV16-201ENST00000390444 WNK3Q9BYP7 1800 aa6.78□□□□□ -1.32
TRAV16-201ENST00000390444 IRF6O14896 467 aa6.78□□□□□ -1.32
TRAV16-201ENST00000390444 U2SURPO15042 1029 aaKnown RBP6.78□□□□□ -1.32
TRAV16-201ENST00000390444 PPM1GO15355 546 aaPredicted RBP6.78□□□□□ -1.32
TRAV16-201ENST00000390444 MAP3K7O43318 606 aa6.78□□□□□ -1.32
TRAV16-201ENST00000390444 EIF4A2Q14240 407 aaKnown RBP6.78□□□□□ -1.32
TRAV16-201ENST00000390444 TYW1BQ6NUM6 668 aa6.78□□□□□ -1.32
TRAV16-201ENST00000390444 TCP11L2Q8N4U5 519 aa6.78□□□□□ -1.32
TRAV16-201ENST00000390444 CDHR5Q9HBB8 845 aa6.78□□□□□ -1.32
TRAV16-201ENST00000390444 SLAIN2Q9P270 581 aa6.78□□□□□ -1.32
TRAV16-201ENST00000390444 PARP4Q9UKK3 1724 aaKnown RBP6.78□□□□□ -1.32
TRAV16-201ENST00000390444 ADAMTS7Q9UKP4 1686 aa6.77□□□□□ -1.32
TRAV16-201ENST00000390444 SPATA31A3Q5VYP0 1347 aa6.77□□□□□ -1.32
TRAV16-201ENST00000390444 HOXC9P31274 260 aa6.77□□□□□ -1.33
TRAV16-201ENST00000390444 AMPHP49418 695 aa6.77□□□□□ -1.33
TRAV16-201ENST00000390444 HSP90AB2PQ58FF8 381 aa6.77□□□□□ -1.33
TRAV16-201ENST00000390444 TRMT2AQ8IZ69 625 aaKnown RBP6.77□□□□□ -1.33
TRAV16-201ENST00000390444 FBXW7Q969H0 707 aa6.77□□□□□ -1.33
TRAV16-201ENST00000390444 PCDHGA10Q9Y5H3 936 aa6.77□□□□□ -1.33
TRAV16-201ENST00000390444 CPDO75976 1380 aa6.77□□□□□ -1.33
TRAV16-201ENST00000390444 PLEKHG2Q9H7P9 1386 aa6.77□□□□□ -1.33
TRAV16-201ENST00000390444 PLCH1Q4KWH8 1693 aa6.77□□□□□ -1.33
TRAV16-201ENST00000390444 SIPA1L3O60292 1781 aaPredicted RBP6.77□□□□□ -1.33
TRAV16-201ENST00000390444 COL14A1Q05707 1796 aaKnown RBP6.77□□□□□ -1.33
TRAV16-201ENST00000390444 RNF123Q5XPI4 1314 aa6.76□□□□□ -1.33
TRAV16-201ENST00000390444 E9PSI1 815 aa6.76□□□□□ -1.33
TRAV16-201ENST00000390444 NEFMP07197 916 aa6.76□□□□□ -1.33
TRAV16-201ENST00000390444 FECHP22830 423 aa6.76□□□□□ -1.33
TRAV16-201ENST00000390444 PRKAR2BP31323 418 aa6.76□□□□□ -1.33
TRAV16-201ENST00000390444 TMPOP42166 694 aaKnown RBP6.76□□□□□ -1.33
TRAV16-201ENST00000390444 XPCQ01831 940 aaPredicted RBP6.76□□□□□ -1.33
TRAV16-201ENST00000390444 SLFN5Q08AF3 891 aa6.76□□□□□ -1.33
TRAV16-201ENST00000390444 DOK7Q18PE1 504 aa6.76□□□□□ -1.33
TRAV16-201ENST00000390444 NUTM2GQ5VZR2 741 aa6.76□□□□□ -1.33
TRAV16-201ENST00000390444 ARHGEF25Q86VW2 580 aa6.76□□□□□ -1.33
TRAV16-201ENST00000390444 WDR63Q8IWG1 891 aa6.76□□□□□ -1.33
TRAV16-201ENST00000390444 WWC1Q8IX03 1113 aa6.76□□□□□ -1.33
TRAV16-201ENST00000390444 PARP9Q8IXQ6 854 aa6.76□□□□□ -1.33
TRAV16-201ENST00000390444 SLAIN1Q8ND83 568 aa6.76□□□□□ -1.33
TRAV16-201ENST00000390444 IP6K1Q92551 441 aa6.76□□□□□ -1.33
TRAV16-201ENST00000390444 SCN11AQ9UI33 1791 aa6.76□□□□□ -1.33
TRAV16-201ENST00000390444 CACNA1FO60840 1977 aa6.76□□□□□ -1.33
TRAV16-201ENST00000390444 IL16Q14005 1332 aa6.76□□□□□ -1.33
TRAV16-201ENST00000390444 KDM3BQ7LBC6 1761 aa6.75□□□□□ -1.33
TRAV16-201ENST00000390444 GCP02774 474 aa6.75□□□□□ -1.33
TRAV16-201ENST00000390444 FOSBP53539 338 aa6.75□□□□□ -1.33
TRAV16-201ENST00000390444 DUSP27Q5VZP5 1158 aa6.75□□□□□ -1.33
TRAV16-201ENST00000390444 CDCA7LQ96GN5 454 aa6.75□□□□□ -1.33
TRAV16-201ENST00000390444 SALL2Q9Y467 1007 aaPredicted RBP6.75□□□□□ -1.33
TRAV16-201ENST00000390444 NRAPQ86VF7 1730 aa6.75□□□□□ -1.33
TRAV16-201ENST00000390444 SHANK3Q9BYB0 1731 aa6.75□□□□□ -1.33
TRAV16-201ENST00000390444 NWD2Q9ULI1 1742 aa6.75□□□□□ -1.33
TRAV16-201ENST00000390444 SENP3-EIF4A1A0A087X0R7 540 aa6.74□□□□□ -1.33
TRAV16-201ENST00000390444 RIMBP2O15034 1052 aa6.74□□□□□ -1.33
TRAV16-201ENST00000390444 HMOX1P09601 288 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms