RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 SOGA3Q5TF21 947 aa12.23□□□□□ -0.45
PKP4-201ENST00000389757 BLOC1S2Q6QNY1 142 aa12.23□□□□□ -0.45
PKP4-201ENST00000389757 PPP1R42Q7Z4L9 355 aa12.23□□□□□ -0.45
PKP4-201ENST00000389757 TXLNAP40222 546 aa12.22□□□□□ -0.45
PKP4-201ENST00000389757 SMARCC1Q92922 1105 aaPredicted RBP12.22□□□□□ -0.45
PKP4-201ENST00000389757 FAM83GA6ND36 823 aa12.22□□□□□ -0.45
PKP4-201ENST00000389757 KRT32Q14532 448 aa12.22□□□□□ -0.45
PKP4-201ENST00000389757 CWC25Q9NXE8 425 aaPredicted RBP12.22□□□□□ -0.45
PKP4-201ENST00000389757 MAP3K2Q9Y2U5 619 aa12.22□□□□□ -0.45
PKP4-201ENST00000389757 ZNF396Q96N95 335 aaPredicted RBP12.22□□□□□ -0.45
PKP4-201ENST00000389757 TRPM2O94759 1503 aa12.22□□□□□ -0.45
PKP4-201ENST00000389757 ZNF287Q9HBT7 754 aa12.22□□□□□ -0.45
PKP4-201ENST00000389757 MX1P20591 662 aa12.21□□□□□ -0.45
PKP4-201ENST00000389757 CDC5LQ99459 802 aaKnown RBP12.21□□□□□ -0.45
PKP4-201ENST00000389757 MBIPQ9NS73 344 aa12.21□□□□□ -0.45
PKP4-201ENST00000389757 LRRFIP2Q9Y608 721 aaKnown RBP12.21□□□□□ -0.45
PKP4-201ENST00000389757 IL2RBP14784 551 aa12.21□□□□□ -0.45
PKP4-201ENST00000389757 DZIP1Q86YF9 867 aaKnown RBP12.21□□□□□ -0.45
PKP4-201ENST00000389757 PIK3R4Q99570 1358 aa12.21□□□□□ -0.45
PKP4-201ENST00000389757 OLFM4Q6UX06 510 aa12.21□□□□□ -0.45
PKP4-201ENST00000389757 ACSBG1Q96GR2 724 aa12.21□□□□□ -0.45
PKP4-201ENST00000389757 ABCA5Q8WWZ7 1642 aa12.21□□□□□ -0.46
PKP4-201ENST00000389757 USP5P45974 858 aa12.21□□□□□ -0.46
PKP4-201ENST00000389757 STK3Q13188 491 aa12.21□□□□□ -0.46
PKP4-201ENST00000389757 IMMTQ16891 758 aaKnown RBP12.21□□□□□ -0.46
PKP4-201ENST00000389757 CNKSR2Q8WXI2 1034 aa12.21□□□□□ -0.46
PKP4-201ENST00000389757 ATP7AQ04656 1500 aa12.21□□□□□ -0.46
PKP4-201ENST00000389757 IL16Q14005 1332 aa12.21□□□□□ -0.46
PKP4-201ENST00000389757 DDX46Q7L014 1031 aaKnown RBP12.2□□□□□ -0.46
PKP4-201ENST00000389757 A0A0U1RQG5 324 aaPredicted RBP12.2□□□□□ -0.46
PKP4-201ENST00000389757 CDKL5O76039 1030 aa12.2□□□□□ -0.46
PKP4-201ENST00000389757 FLT4P35916 1363 aa12.2□□□□□ -0.46
PKP4-201ENST00000389757 C6orf229H3BNL8 230 aa12.2□□□□□ -0.46
PKP4-201ENST00000389757 MAP3K12Q12852 859 aa12.2□□□□□ -0.46
PKP4-201ENST00000389757 STK38Q15208 465 aa12.2□□□□□ -0.46
PKP4-201ENST00000389757 AKAP4Q5JQC9 854 aa12.2□□□□□ -0.46
PKP4-201ENST00000389757 ZNF219Q9P2Y4 722 aaPredicted RBP12.2□□□□□ -0.46
PKP4-201ENST00000389757 NPATQ14207 1427 aa12.2□□□□□ -0.46
PKP4-201ENST00000389757 ATP5J2-PTCD1G3V325 749 aa12.2□□□□□ -0.46
PKP4-201ENST00000389757 GCP02774 474 aa12.2□□□□□ -0.46
PKP4-201ENST00000389757 YTHDC2Q9H6S0 1430 aaKnown RBP12.19□□□□□ -0.46
PKP4-201ENST00000389757 JMYQ8N9B5 988 aa12.19□□□□□ -0.46
PKP4-201ENST00000389757 ATP6V1AP38606 617 aa12.19□□□□□ -0.46
PKP4-201ENST00000389757 EIF4A2Q14240 407 aaKnown RBP12.19□□□□□ -0.46
PKP4-201ENST00000389757 CRACR2BQ8N4Y2 399 aaPredicted RBP12.19□□□□□ -0.46
PKP4-201ENST00000389757 NAT10Q9H0A0 1025 aaKnown RBP12.19□□□□□ -0.46
PKP4-201ENST00000389757 BOLA2Q9H3K6 86 aa12.19□□□□□ -0.46
PKP4-201ENST00000389757 NEO1Q92859 1461 aa12.19□□□□□ -0.46
PKP4-201ENST00000389757 POLR3DP05423 398 aaPredicted RBP12.19□□□□□ -0.46
PKP4-201ENST00000389757 TMEM132AQ24JP5 1023 aa12.19□□□□□ -0.46
PKP4-201ENST00000389757 JAKMIP1Q96N16 626 aaKnown RBP12.19□□□□□ -0.46
PKP4-201ENST00000389757 ABCC1P33527 1531 aa12.19□□□□□ -0.46
PKP4-201ENST00000389757 PI4KAP2A4QPH2 592 aa12.19□□□□□ -0.46
PKP4-201ENST00000389757 NBPF6Q5VWK0 638 aa12.19□□□□□ -0.46
PKP4-201ENST00000389757 NBPF5PQ86XG9 351 aaPredicted RBP12.19□□□□□ -0.46
PKP4-201ENST00000389757 SLF2Q8IX21 1173 aa12.19□□□□□ -0.46
PKP4-201ENST00000389757 PI4KAP1Q8N8J0 262 aa12.19□□□□□ -0.46
PKP4-201ENST00000389757 NBPF4Q96M43 638 aa12.19□□□□□ -0.46
PKP4-201ENST00000389757 KINO60870 393 aaKnown RBP12.18□□□□□ -0.46
PKP4-201ENST00000389757 ST5P78524 1137 aa12.18□□□□□ -0.46
PKP4-201ENST00000389757 AEBP1Q8IUX7 1158 aa12.18□□□□□ -0.46
PKP4-201ENST00000389757 ZRANB1Q9UGI0 708 aa12.18□□□□□ -0.46
PKP4-201ENST00000389757 ASXL1Q8IXJ9 1541 aa12.18□□□□□ -0.46
PKP4-201ENST00000389757 EIF2AK4Q9P2K8 1649 aaKnown RBP12.18□□□□□ -0.46
PKP4-201ENST00000389757 KRT18P05783 430 aaKnown RBP12.18□□□□□ -0.46
PKP4-201ENST00000389757 EPS15P42566 896 aa12.18□□□□□ -0.46
PKP4-201ENST00000389757 ANKRD13DQ6ZTN6 518 aa12.18□□□□□ -0.46
PKP4-201ENST00000389757 UBE3BQ7Z3V4 1068 aa12.18□□□□□ -0.46
PKP4-201ENST00000389757 PDRG1Q9NUG6 133 aa12.18□□□□□ -0.46
PKP4-201ENST00000389757 CFAP43Q8NDM7 1665 aa12.18□□□□□ -0.46
PKP4-201ENST00000389757 LDHAL6AQ6ZMR3 332 aa12.18□□□□□ -0.46
PKP4-201ENST00000389757 MPHOSPH10O00566 681 aaKnown RBP12.17□□□□□ -0.46
PKP4-201ENST00000389757 CCDC8Q9H0W5 538 aaPredicted RBP12.17□□□□□ -0.46
PKP4-201ENST00000389757 POLKQ9UBT6 870 aa12.17□□□□□ -0.46
PKP4-201ENST00000389757 SMARCA5O60264 1052 aaPredicted RBP12.17□□□□□ -0.46
PKP4-201ENST00000389757 ZNF622Q969S3 477 aaKnown RBP eCLIP12.17□□□□□ -0.461e-7■□□□□ 10.3
PKP4-201ENST00000389757 U3KPZ7 1027 aaPredicted RBP12.17□□□□□ -0.46
PKP4-201ENST00000389757 GSE1Q14687 1217 aa12.17□□□□□ -0.46
PKP4-201ENST00000389757 ZSCAN31Q96LW9 406 aaPredicted RBP12.17□□□□□ -0.46
PKP4-201ENST00000389757 NOL7Q9UMY1 257 aaKnown RBP12.17□□□□□ -0.46
PKP4-201ENST00000389757 TRIM27P14373 513 aa12.16□□□□□ -0.46
PKP4-201ENST00000389757 NAPBQ9H115 298 aa12.16□□□□□ -0.46
PKP4-201ENST00000389757 MKNK2Q9HBH9 465 aa12.16□□□□□ -0.46
PKP4-201ENST00000389757 MINDY4BA8MYZ0 360 aa12.16□□□□□ -0.46
PKP4-201ENST00000389757 WWC2Q6AWC2 1192 aa12.16□□□□□ -0.46
PKP4-201ENST00000389757 SLC39A6Q13433 755 aa12.16□□□□□ -0.46
PKP4-201ENST00000389757 ANXA1P04083 346 aa12.16□□□□□ -0.46
PKP4-201ENST00000389757 CEBPZQ03701 1054 aaKnown RBP12.15□□□□□ -0.46
PKP4-201ENST00000389757 GOLGA6L1Q8N7Z2 621 aa12.15□□□□□ -0.46
PKP4-201ENST00000389757 SETDB2Q96T68 719 aa12.15□□□□□ -0.46
PKP4-201ENST00000389757 FIBPO43427 364 aa12.15□□□□□ -0.46
PKP4-201ENST00000389757 MBD3O95983 291 aa12.15□□□□□ -0.46
PKP4-201ENST00000389757 CCDC152Q4G0S7 254 aa12.15□□□□□ -0.46
PKP4-201ENST00000389757 CCDC70Q6NSX1 233 aa12.15□□□□□ -0.46
PKP4-201ENST00000389757 CCAR2Q8N163 923 aaKnown RBP12.15□□□□□ -0.46
PKP4-201ENST00000389757 WDHD1O75717 1129 aaPredicted RBP12.15□□□□□ -0.46
PKP4-201ENST00000389757 WASF1Q92558 559 aa12.15□□□□□ -0.46
PKP4-201ENST00000389757 OFD1O75665 1012 aa12.15□□□□□ -0.47
PKP4-201ENST00000389757 LARP1BQ659C4 914 aaKnown RBP12.15□□□□□ -0.47
PKP4-201ENST00000389757 XAGE3Q8WTP9 111 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms