RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 KIF1BPQ96EK5 621 aa15.43■□□□□ 0.06
PTPRN2-203ENST00000389418 ZNF396Q96N95 335 aaPredicted RBP15.43■□□□□ 0.06
PTPRN2-203ENST00000389418 ORAI2Q96SN7 254 aa15.43■□□□□ 0.06
PTPRN2-203ENST00000389418 CAVIN1Q6NZI2 390 aaKnown RBP15.43■□□□□ 0.06
PTPRN2-203ENST00000389418 TRIM22Q8IYM9 498 aa15.43■□□□□ 0.06
PTPRN2-203ENST00000389418 SDF4Q9BRK5 362 aa15.43■□□□□ 0.06
PTPRN2-203ENST00000389418 UPF3BQ9BZI7 483 aaKnown RBP15.43■□□□□ 0.06
PTPRN2-203ENST00000389418 SNRKQ9NRH2 765 aa15.43■□□□□ 0.06
PTPRN2-203ENST00000389418 FIBPO43427 364 aa15.42■□□□□ 0.06
PTPRN2-203ENST00000389418 UBE3BQ7Z3V4 1068 aa15.42■□□□□ 0.06
PTPRN2-203ENST00000389418 PRPF40AO75400 957 aaKnown RBP15.42■□□□□ 0.06
PTPRN2-203ENST00000389418 TRIM27P14373 513 aa15.42■□□□□ 0.06
PTPRN2-203ENST00000389418 HYPKQ9NX55 129 aa15.42■□□□□ 0.06
PTPRN2-203ENST00000389418 SLC4A8Q2Y0W8 1093 aa15.42■□□□□ 0.06
PTPRN2-203ENST00000389418 MBIPQ9NS73 344 aa15.42■□□□□ 0.06
PTPRN2-203ENST00000389418 DBF4Q9UBU7 674 aaPredicted RBP15.42■□□□□ 0.06
PTPRN2-203ENST00000389418 TXLNAP40222 546 aa15.41■□□□□ 0.06
PTPRN2-203ENST00000389418 FLIIQ13045 1269 aa15.41■□□□□ 0.06
PTPRN2-203ENST00000389418 OLFM4Q6UX06 510 aa15.41■□□□□ 0.06
PTPRN2-203ENST00000389418 IL16Q14005 1332 aa15.41■□□□□ 0.06
PTPRN2-203ENST00000389418 PPFIA3O75145 1194 aa15.41■□□□□ 0.06
PTPRN2-203ENST00000389418 LARP6Q9BRS8 491 aaKnown RBP15.41■□□□□ 0.06
PTPRN2-203ENST00000389418 FMNL2Q96PY5 1086 aa15.41■□□□□ 0.06
PTPRN2-203ENST00000389418 MSH6P52701 1360 aa15.4■□□□□ 0.06
PTPRN2-203ENST00000389418 K7ELQ4 463 aaPredicted RBP15.4■□□□□ 0.06
PTPRN2-203ENST00000389418 A0A0U1RQG5 324 aaPredicted RBP15.4■□□□□ 0.06
PTPRN2-203ENST00000389418 ZSCAN31Q96LW9 406 aaPredicted RBP15.4■□□□□ 0.06
PTPRN2-203ENST00000389418 PTPRCP08575 1304 aa15.4■□□□□ 0.06
PTPRN2-203ENST00000389418 GLRX3O76003 335 aaKnown RBP15.4■□□□□ 0.06
PTPRN2-203ENST00000389418 IFNL2Q8IZJ0 200 aa15.4■□□□□ 0.06
PTPRN2-203ENST00000389418 DNAAF4Q8WXU2 420 aa15.4■□□□□ 0.06
PTPRN2-203ENST00000389418 ZMYM3Q14202 1370 aa15.4■□□□□ 0.06
PTPRN2-203ENST00000389418 MRE11P49959 708 aa15.39■□□□□ 0.05
PTPRN2-203ENST00000389418 CCAR2Q8N163 923 aaKnown RBP15.39■□□□□ 0.05
PTPRN2-203ENST00000389418 ABCA8O94911 1581 aa15.39■□□□□ 0.05
PTPRN2-203ENST00000389418 CDKL5O76039 1030 aa15.39■□□□□ 0.05
PTPRN2-203ENST00000389418 CCDC82Q8N4S0 544 aa15.39■□□□□ 0.05
PTPRN2-203ENST00000389418 MPNDQ8N594 471 aa15.39■□□□□ 0.05
PTPRN2-203ENST00000389418 ANKIB1Q9P2G1 1089 aa15.39■□□□□ 0.05
PTPRN2-203ENST00000389418 RIMS2Q9UQ26 1411 aa15.39■□□□□ 0.05
PTPRN2-203ENST00000389418 CHD1O14646 1710 aa15.39■□□□□ 0.05
PTPRN2-203ENST00000389418 TDO2P48775 406 aa15.39■□□□□ 0.05
PTPRN2-203ENST00000389418 IQSEC3Q9UPP2 1182 aaPredicted RBP15.39■□□□□ 0.05
PTPRN2-203ENST00000389418 RALGAPBQ86X10 1494 aa15.39■□□□□ 0.05
PTPRN2-203ENST00000389418 KINO60870 393 aaKnown RBP15.39■□□□□ 0.05
PTPRN2-203ENST00000389418 PRAG1Q86YV5 1406 aa15.38■□□□□ 0.05
PTPRN2-203ENST00000389418 NASPP49321 788 aaPredicted RBP15.38■□□□□ 0.05
PTPRN2-203ENST00000389418 TESK2Q96S53 571 aa15.38■□□□□ 0.05
PTPRN2-203ENST00000389418 MAP3K2Q9Y2U5 619 aa15.38■□□□□ 0.05
PTPRN2-203ENST00000389418 CFAP65Q6ZU64 1925 aaKnown RBP15.38■□□□□ 0.05
PTPRN2-203ENST00000389418 TOM1O60784 492 aa15.38■□□□□ 0.05
PTPRN2-203ENST00000389418 BLOC1S2Q6QNY1 142 aa15.38■□□□□ 0.05
PTPRN2-203ENST00000389418 MAGI3Q5TCQ9 1506 aa15.38■□□□□ 0.05
PTPRN2-203ENST00000389418 ZNF592Q92610 1267 aa15.37■□□□□ 0.05
PTPRN2-203ENST00000389418 CARD14Q9BXL6 1004 aa15.37■□□□□ 0.05
PTPRN2-203ENST00000389418 POLKQ9UBT6 870 aa15.37■□□□□ 0.05
PTPRN2-203ENST00000389418 TNNQ9UQP3 1299 aa15.37■□□□□ 0.05
PTPRN2-203ENST00000389418 EIF4A2Q14240 407 aaKnown RBP15.37■□□□□ 0.05
PTPRN2-203ENST00000389418 NPHP3Q7Z494 1330 aa15.37■□□□□ 0.05
PTPRN2-203ENST00000389418 WDR33Q9C0J8 1336 aaKnown RBP15.37■□□□□ 0.05
PTPRN2-203ENST00000389418 MINDY4BA8MYZ0 360 aa15.37■□□□□ 0.05
PTPRN2-203ENST00000389418 R3HCC1Q9Y3T6 440 aaKnown RBP15.37■□□□□ 0.05
PTPRN2-203ENST00000389418 IFIT1P09914 478 aaKnown RBP15.36■□□□□ 0.05
PTPRN2-203ENST00000389418 ZNF287Q9HBT7 754 aa15.36■□□□□ 0.05
PTPRN2-203ENST00000389418 PHACTR3Q96KR7 559 aa15.36■□□□□ 0.05
PTPRN2-203ENST00000389418 JAKMIP1Q96N16 626 aaKnown RBP15.36■□□□□ 0.05
PTPRN2-203ENST00000389418 GPS2Q13227 327 aa15.36■□□□□ 0.05
PTPRN2-203ENST00000389418 DDX11Q96FC9 970 aa15.36■□□□□ 0.05
PTPRN2-203ENST00000389418 IFIT5Q13325 482 aaKnown RBP15.36■□□□□ 0.05
PTPRN2-203ENST00000389418 CCAR1Q8IX12 1150 aaKnown RBP15.36■□□□□ 0.05
PTPRN2-203ENST00000389418 NFATC2IPQ8NCF5 419 aa15.36■□□□□ 0.05
PTPRN2-203ENST00000389418 PPIP5K1Q6PFW1 1433 aa15.36■□□□□ 0.05
PTPRN2-203ENST00000389418 DNMT1P26358 1616 aaKnown RBP15.35■□□□□ 0.05
PTPRN2-203ENST00000389418 C6orf229H3BNL8 230 aa15.35■□□□□ 0.05
PTPRN2-203ENST00000389418 DHX8Q14562 1220 aaKnown RBP15.35■□□□□ 0.05
PTPRN2-203ENST00000389418 CCDC69A6NI79 296 aa15.35■□□□□ 0.05
PTPRN2-203ENST00000389418 GCP02774 474 aa15.35■□□□□ 0.05
PTPRN2-203ENST00000389418 STK38Q15208 465 aa15.35■□□□□ 0.05
PTPRN2-203ENST00000389418 C19orf44Q9H6X5 657 aa15.35■□□□□ 0.05
PTPRN2-203ENST00000389418 CHPF2Q9P2E5 772 aa15.35■□□□□ 0.05
PTPRN2-203ENST00000389418 CIZ1Q9ULV3 898 aaPredicted RBP15.35■□□□□ 0.05
PTPRN2-203ENST00000389418 PRM3Q9NNZ6 103 aa15.35■□□□□ 0.05
PTPRN2-203ENST00000389418 MX1P20591 662 aa15.34■□□□□ 0.05
PTPRN2-203ENST00000389418 FERMT3Q86UX7 667 aa15.34■□□□□ 0.05
PTPRN2-203ENST00000389418 C8orf58Q8NAV2 365 aa15.34■□□□□ 0.05
PTPRN2-203ENST00000389418 ZCRB1Q8TBF4 217 aaKnown RBP15.34■□□□□ 0.05
PTPRN2-203ENST00000389418 CDK5RAP3Q96JB5 506 aa15.34■□□□□ 0.05
PTPRN2-203ENST00000389418 UBAC1Q9BSL1 405 aa15.34■□□□□ 0.05
PTPRN2-203ENST00000389418 CAVIN4Q5BKX8 364 aa15.34■□□□□ 0.05
PTPRN2-203ENST00000389418 COPS6Q7L5N1 327 aa15.34■□□□□ 0.05
PTPRN2-203ENST00000389418 IL27Q8NEV9 243 aa15.34■□□□□ 0.05
PTPRN2-203ENST00000389418 WASF1Q92558 559 aa15.33■□□□□ 0.05
PTPRN2-203ENST00000389418 LDHAL6AQ6ZMR3 332 aa15.33■□□□□ 0.04
PTPRN2-203ENST00000389418 MTHFSDQ2M296 383 aaKnown RBP15.33■□□□□ 0.04
PTPRN2-203ENST00000389418 SOGA3Q5TF21 947 aa15.33■□□□□ 0.04
PTPRN2-203ENST00000389418 AIDAQ96BJ3 306 aa15.33■□□□□ 0.04
PTPRN2-203ENST00000389418 AK7Q96M32 723 aa15.33■□□□□ 0.04
PTPRN2-203ENST00000389418 TMOD2Q9NZR1 351 aa15.33■□□□□ 0.04
PTPRN2-203ENST00000389418 NEO1Q92859 1461 aa15.32■□□□□ 0.04
PTPRN2-203ENST00000389418 HOMER1Q86YM7 354 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms