RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 ANKRD36BQ8N2N9 1353 aa15.58■□□□□ 0.09
TRAPPC9-201ENST00000389328 C17orf53Q8N3J3 647 aaPredicted RBP15.58■□□□□ 0.08
TRAPPC9-201ENST00000389328 NUDT16Q96DE0 195 aaKnown RBP15.58■□□□□ 0.08
TRAPPC9-201ENST00000389328 ESYT1Q9BSJ8 1104 aa15.58■□□□□ 0.08
TRAPPC9-201ENST00000389328 BCORL1Q5H9F3 1711 aa15.58■□□□□ 0.08
TRAPPC9-201ENST00000389328 GJB2P29033 226 aa15.58■□□□□ 0.08
TRAPPC9-201ENST00000389328 TRMT1Q9NXH9 659 aaKnown RBP15.58■□□□□ 0.08
TRAPPC9-201ENST00000389328 CPLX2Q6PUV4 134 aaKnown RBP15.57■□□□□ 0.08
TRAPPC9-201ENST00000389328 CCDC61Q9Y6R9 512 aa15.57■□□□□ 0.08
TRAPPC9-201ENST00000389328 RAB11FIP3O75154 756 aa15.57■□□□□ 0.08
TRAPPC9-201ENST00000389328 KIF1BPQ96EK5 621 aa15.57■□□□□ 0.08
TRAPPC9-201ENST00000389328 APPP05067 770 aa15.57■□□□□ 0.08
TRAPPC9-201ENST00000389328 ANKRD1Q15327 319 aa15.57■□□□□ 0.08
TRAPPC9-201ENST00000389328 PTPN14Q15678 1187 aa15.57■□□□□ 0.08
TRAPPC9-201ENST00000389328 CLIP2Q9UDT6 1046 aa15.57■□□□□ 0.08
TRAPPC9-201ENST00000389328 SHANK2Q9UPX8 1470 aa15.57■□□□□ 0.08
TRAPPC9-201ENST00000389328 KIAA0556O60303 1618 aa15.57■□□□□ 0.08
TRAPPC9-201ENST00000389328 STK38Q15208 465 aa15.57■□□□□ 0.08
TRAPPC9-201ENST00000389328 RASSF8Q8NHQ8 419 aa15.57■□□□□ 0.08
TRAPPC9-201ENST00000389328 TSC1Q92574 1164 aa15.57■□□□□ 0.08
TRAPPC9-201ENST00000389328 ZNF692Q9BU19 519 aaPredicted RBP15.57■□□□□ 0.08
TRAPPC9-201ENST00000389328 TMEM63CQ9P1W3 806 aa15.57■□□□□ 0.08
TRAPPC9-201ENST00000389328 EIF2AK4Q9P2K8 1649 aaKnown RBP15.56■□□□□ 0.08
TRAPPC9-201ENST00000389328 HIP1O00291 1037 aa15.56■□□□□ 0.08
TRAPPC9-201ENST00000389328 ZSCAN22P10073 491 aaPredicted RBP15.56■□□□□ 0.08
TRAPPC9-201ENST00000389328 CEP85Q6P2H3 762 aa15.56■□□□□ 0.08
TRAPPC9-201ENST00000389328 TRIM29Q14134 588 aa15.55■□□□□ 0.08
TRAPPC9-201ENST00000389328 FLIIQ13045 1269 aa15.55■□□□□ 0.08
TRAPPC9-201ENST00000389328 PPP1R9BQ96SB3 815 aa15.55■□□□□ 0.08
TRAPPC9-201ENST00000389328 PTPRCP08575 1304 aa15.55■□□□□ 0.08
TRAPPC9-201ENST00000389328 DTNBO60941 627 aa15.55■□□□□ 0.08
TRAPPC9-201ENST00000389328 GLRX3O76003 335 aaKnown RBP15.55■□□□□ 0.08
TRAPPC9-201ENST00000389328 ERBB4Q15303 1308 aa15.55■□□□□ 0.08
TRAPPC9-201ENST00000389328 NECAB1Q8N987 351 aa15.55■□□□□ 0.08
TRAPPC9-201ENST00000389328 DISP1Q96F81 1524 aa15.55■□□□□ 0.08
TRAPPC9-201ENST00000389328 CCDC94Q9BW85 323 aaPredicted RBP15.55■□□□□ 0.08
TRAPPC9-201ENST00000389328 WASHC4Q2M389 1173 aa15.55■□□□□ 0.08
TRAPPC9-201ENST00000389328 ERC1Q8IUD2 1116 aa15.55■□□□□ 0.08
TRAPPC9-201ENST00000389328 POLKQ9UBT6 870 aa15.55■□□□□ 0.08
TRAPPC9-201ENST00000389328 CCDC186Q7Z3E2 898 aa15.54■□□□□ 0.08
TRAPPC9-201ENST00000389328 SCAND2PQ9GZW5 306 aaPredicted RBP15.54■□□□□ 0.08
TRAPPC9-201ENST00000389328 DNM1Q05193 864 aaKnown RBP15.54■□□□□ 0.08
TRAPPC9-201ENST00000389328 CEP57L1Q8IYX8 460 aa15.54■□□□□ 0.08
TRAPPC9-201ENST00000389328 ZNF396Q96N95 335 aaPredicted RBP15.54■□□□□ 0.08
TRAPPC9-201ENST00000389328 MBD5Q9P267 1494 aa15.54■□□□□ 0.08
TRAPPC9-201ENST00000389328 ZNF165P49910 485 aa15.53■□□□□ 0.08
TRAPPC9-201ENST00000389328 TTLL5Q6EMB2 1281 aa15.53■□□□□ 0.08
TRAPPC9-201ENST00000389328 TRERF1Q96PN7 1200 aa15.53■□□□□ 0.08
TRAPPC9-201ENST00000389328 CFAP45Q9UL16 551 aa15.53■□□□□ 0.08
TRAPPC9-201ENST00000389328 OSCARQ8IYS5 282 aa15.53■□□□□ 0.08
TRAPPC9-201ENST00000389328 TPM1P09493 284 aa15.53■□□□□ 0.08
TRAPPC9-201ENST00000389328 TRDNQ13061 729 aa15.53■□□□□ 0.08
TRAPPC9-201ENST00000389328 RALYLQ86SE5 291 aaKnown RBP15.53■□□□□ 0.08
TRAPPC9-201ENST00000389328 TCEANC2Q96MN5 208 aa15.53■□□□□ 0.08
TRAPPC9-201ENST00000389328 SH2B1Q9NRF2 756 aaPredicted RBP15.53■□□□□ 0.08
TRAPPC9-201ENST00000389328 ZRANB1Q9UGI0 708 aa15.53■□□□□ 0.08
TRAPPC9-201ENST00000389328 SERPINC1P01008 464 aa15.53■□□□□ 0.08
TRAPPC9-201ENST00000389328 BOLA2Q9H3K6 86 aa15.52■□□□□ 0.08
TRAPPC9-201ENST00000389328 DUOX2Q9NRD8 1548 aa15.52■□□□□ 0.08
TRAPPC9-201ENST00000389328 TRAPPC8Q9Y2L5 1435 aa15.52■□□□□ 0.08
TRAPPC9-201ENST00000389328 TAF7Q15545 349 aaPredicted RBP15.52■□□□□ 0.07
TRAPPC9-201ENST00000389328 OLFM4Q6UX06 510 aa15.52■□□□□ 0.07
TRAPPC9-201ENST00000389328 ABTB2Q8N961 1025 aa15.52■□□□□ 0.07
TRAPPC9-201ENST00000389328 TTC5Q8N0Z6 440 aa15.52■□□□□ 0.07
TRAPPC9-201ENST00000389328 GSPT1P15170 499 aaKnown RBP15.51■□□□□ 0.07
TRAPPC9-201ENST00000389328 ATP2B1P20020 1258 aa15.51■□□□□ 0.07
TRAPPC9-201ENST00000389328 NFXL1Q6ZNB6 911 aa15.51■□□□□ 0.07
TRAPPC9-201ENST00000389328 PPFIA3O75145 1194 aa15.51■□□□□ 0.07
TRAPPC9-201ENST00000389328 PPP1R42Q7Z4L9 355 aa15.51■□□□□ 0.07
TRAPPC9-201ENST00000389328 KIF18AQ8NI77 898 aa15.51■□□□□ 0.07
TRAPPC9-201ENST00000389328 GADD45BO75293 160 aaPredicted RBP15.51■□□□□ 0.07
TRAPPC9-201ENST00000389328 STK11IPQ8N1F8 1099 aa15.5■□□□□ 0.07
TRAPPC9-201ENST00000389328 ANAPC15P60006 121 aa15.5■□□□□ 0.07
TRAPPC9-201ENST00000389328 CCDC8Q9H0W5 538 aaPredicted RBP15.5■□□□□ 0.07
TRAPPC9-201ENST00000389328 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.5■□□□□ 0.07
TRAPPC9-201ENST00000389328 V9GYY5 206 aaPredicted RBP15.5■□□□□ 0.07
TRAPPC9-201ENST00000389328 GUCY1B3Q02153 619 aa15.5■□□□□ 0.07
TRAPPC9-201ENST00000389328 TSR1Q2NL82 804 aaKnown RBP15.5■□□□□ 0.07
TRAPPC9-201ENST00000389328 UBXN4Q92575 508 aa15.5■□□□□ 0.07
TRAPPC9-201ENST00000389328 F13A1P00488 732 aa15.49■□□□□ 0.07
TRAPPC9-201ENST00000389328 HSP90B2PQ58FF3 399 aa15.49■□□□□ 0.07
TRAPPC9-201ENST00000389328 A0A1W2PP64 1363 aa15.49■□□□□ 0.07
TRAPPC9-201ENST00000389328 PTGS1P23219 599 aa15.49■□□□□ 0.07
TRAPPC9-201ENST00000389328 SKIDA1Q1XH10 827 aa15.49■□□□□ 0.07
TRAPPC9-201ENST00000389328 FBXO31Q5XUX0 539 aaPredicted RBP15.49■□□□□ 0.07
TRAPPC9-201ENST00000389328 CYB5RLQ6IPT4 315 aa15.49■□□□□ 0.07
TRAPPC9-201ENST00000389328 GNAT3A8MTJ3 354 aa15.49■□□□□ 0.07
TRAPPC9-201ENST00000389328 LRRFIP1Q32MZ4 808 aaKnown RBP15.49■□□□□ 0.07
TRAPPC9-201ENST00000389328 GPT2Q8TD30 523 aa15.49■□□□□ 0.07
TRAPPC9-201ENST00000389328 WDR7Q9Y4E6 1490 aa15.49■□□□□ 0.07
TRAPPC9-201ENST00000389328 CPA1P15085 419 aa15.49■□□□□ 0.07
TRAPPC9-201ENST00000389328 DACT1Q9NYF0 836 aa15.49■□□□□ 0.07
TRAPPC9-201ENST00000389328 HOOK1Q9UJC3 728 aaKnown RBP15.49■□□□□ 0.07
TRAPPC9-201ENST00000389328 TERF1P54274 439 aa15.48■□□□□ 0.07
TRAPPC9-201ENST00000389328 PSME1Q06323 249 aa15.48■□□□□ 0.07
TRAPPC9-201ENST00000389328 ANO6Q4KMQ2 910 aa15.48■□□□□ 0.07
TRAPPC9-201ENST00000389328 FAM200AQ8TCP9 573 aa15.48■□□□□ 0.07
TRAPPC9-201ENST00000389328 ADAMTS12P58397 1594 aa15.48■□□□□ 0.07
TRAPPC9-201ENST00000389328 AKAP17AQ02040 695 aaKnown RBP15.48■□□□□ 0.07
TRAPPC9-201ENST00000389328 DDX19AQ9NUU7 478 aaKnown RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms