RNA–Protein interactions for RNA: ENST00000383329.7

HLA-C-203, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS ALT2 BASIC

Gene HLA-C, Length 1,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-203ENST00000383329 TNS2Q63HR2 1409 aa27.65■■■□□ 2.02
HLA-C-203ENST00000383329 FKBP8Q14318 412 aa27.65■■■□□ 2.02
HLA-C-203ENST00000383329 BABAM1Q9NWV8 329 aa27.64■■■□□ 2.01
HLA-C-203ENST00000383329 EZH2Q15910 746 aaKnown RBP27.63■■■□□ 2.01
HLA-C-203ENST00000383329 RRP1P56182 461 aaKnown RBP27.62■■■□□ 2.01
HLA-C-203ENST00000383329 MEGF6O75095 1541 aa27.61■■■□□ 2.01
HLA-C-203ENST00000383329 TAF7Q15545 349 aaPredicted RBP27.61■■■□□ 2.01
HLA-C-203ENST00000383329 PTF1AQ7RTS3 328 aa27.61■■■□□ 2.01
HLA-C-203ENST00000383329 CAMKK2Q96RR4 588 aa27.6■■■□□ 2.01
HLA-C-203ENST00000383329 CEMIPQ8WUJ3 1361 aa27.6■■■□□ 2.01
HLA-C-203ENST00000383329 IFNL2Q8IZJ0 200 aa27.6■■■□□ 2.01
HLA-C-203ENST00000383329 LGR6Q9HBX8 967 aa27.6■■■□□ 2.01
HLA-C-203ENST00000383329 RNMTO43148 476 aaKnown RBP27.59■■■□□ 2.01
HLA-C-203ENST00000383329 RARSP54136 660 aaKnown RBP27.59■■■□□ 2.01
HLA-C-203ENST00000383329 ERICH6BQ5W0A0 696 aa27.58■■■□□ 2.01
HLA-C-203ENST00000383329 MPRIPQ6WCQ1 1025 aa27.58■■■□□ 2.01
HLA-C-203ENST00000383329 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.58■■■□□ 2.01
HLA-C-203ENST00000383329 ZCRB1Q8TBF4 217 aaKnown RBP27.58■■■□□ 2.01
HLA-C-203ENST00000383329 ZNF428Q96B54 188 aa27.58■■■□□ 2.01
HLA-C-203ENST00000383329 PHKG2P15735 406 aa27.57■■■□□ 2
HLA-C-203ENST00000383329 SRCAPQ6ZRS2 3230 aa27.57■■■□□ 2
HLA-C-203ENST00000383329 BCL9O00512 1426 aa27.57■■■□□ 2
HLA-C-203ENST00000383329 HSP90AB1P08238 724 aaKnown RBP27.56■■■□□ 2
HLA-C-203ENST00000383329 TSPYL4Q9UJ04 414 aa27.56■■■□□ 2
HLA-C-203ENST00000383329 BCAR3O75815 825 aa27.55■■■□□ 2
HLA-C-203ENST00000383329 CYP27B1O15528 508 aa27.54■■■□□ 2
HLA-C-203ENST00000383329 VAMP4O75379 141 aa27.54■■■□□ 2
HLA-C-203ENST00000383329 TEFQ10587 303 aa27.54■■■□□ 2
HLA-C-203ENST00000383329 MIS18AQ9NYP9 233 aa27.54■■■□□ 2
HLA-C-203ENST00000383329 IRX6P78412 446 aaPredicted RBP27.53■■■□□ 2
HLA-C-203ENST00000383329 BCL11BQ9C0K0 894 aaPredicted RBP27.53■■■□□ 2
HLA-C-203ENST00000383329 KAT6BQ8WYB5 2073 aa27.53■■■□□ 2
HLA-C-203ENST00000383329 C8orf58Q8NAV2 365 aa27.52■■■□□ 2
HLA-C-203ENST00000383329 KCNQ2O43526 872 aa27.52■■■□□ 2
HLA-C-203ENST00000383329 ALDH1L2Q3SY69 923 aa27.52■■■□□ 2
HLA-C-203ENST00000383329 DCAF5Q96JK2 942 aa27.52■■■□□ 2
HLA-C-203ENST00000383329 TWISTNBQ3B726 338 aaPredicted RBP27.51■■□□□ 1.99
HLA-C-203ENST00000383329 DDX54Q8TDD1 881 aaKnown RBP27.51■■□□□ 1.99
HLA-C-203ENST00000383329 ACSBG1Q96GR2 724 aa27.51■■□□□ 1.99
HLA-C-203ENST00000383329 PCDH11XQ9BZA7 1347 aa27.51■■□□□ 1.99
HLA-C-203ENST00000383329 PCDH11YQ9BZA8 1340 aa27.51■■□□□ 1.99
HLA-C-203ENST00000383329 RREB1Q92766 1687 aa27.5■■□□□ 1.99
HLA-C-203ENST00000383329 PSDA5PKW4 1024 aaPredicted RBP27.5■■□□□ 1.99
HLA-C-203ENST00000383329 TSPYL6Q8N831 410 aa27.5■■□□□ 1.99
HLA-C-203ENST00000383329 PKD1L3Q7Z443 1732 aa27.49■■□□□ 1.99
HLA-C-203ENST00000383329 PLIN1O60240 522 aa27.49■■□□□ 1.99
HLA-C-203ENST00000383329 SHANK3Q9BYB0 1731 aa27.49■■□□□ 1.99
HLA-C-203ENST00000383329 NKX1-1Q15270 411 aaPredicted RBP27.48■■□□□ 1.99
HLA-C-203ENST00000383329 SSH1Q8WYL5 1049 aa27.48■■□□□ 1.99
HLA-C-203ENST00000383329 NUP188Q5SRE5 1749 aa27.47■■□□□ 1.99
HLA-C-203ENST00000383329 ELL2O00472 640 aaPredicted RBP27.47■■□□□ 1.99
HLA-C-203ENST00000383329 NHSQ6T4R5 1651 aa27.46■■□□□ 1.99
HLA-C-203ENST00000383329 BTBD11A6QL63 1104 aa27.45■■□□□ 1.99
HLA-C-203ENST00000383329 PLSCR1O15162 318 aa27.45■■□□□ 1.99
HLA-C-203ENST00000383329 BRPF1P55201 1214 aaPredicted RBP27.45■■□□□ 1.99
HLA-C-203ENST00000383329 SOS1Q07889 1333 aaPredicted RBP27.44■■□□□ 1.98
HLA-C-203ENST00000383329 R3HDM1Q15032 1099 aaKnown RBP27.44■■□□□ 1.98
HLA-C-203ENST00000383329 SLC52A2Q9HAB3 445 aa27.44■■□□□ 1.98
HLA-C-203ENST00000383329 SMC4Q9NTJ3 1288 aa27.44■■□□□ 1.98
HLA-C-203ENST00000383329 ADAMTS7Q9UKP4 1686 aa27.44■■□□□ 1.98
HLA-C-203ENST00000383329 KDM6AO15550 1401 aaPredicted RBP27.43■■□□□ 1.98
HLA-C-203ENST00000383329 RGPD3A6NKT7 1758 aaPredicted RBP27.42■■□□□ 1.98
HLA-C-203ENST00000383329 RGPD4Q7Z3J3 1758 aa27.42■■□□□ 1.98
HLA-C-203ENST00000383329 PDE3AQ14432 1141 aa27.42■■□□□ 1.98
HLA-C-203ENST00000383329 BCL2L13Q9BXK5 485 aa27.42■■□□□ 1.98
HLA-C-203ENST00000383329 ERVV-2B6SEH9 535 aa27.41■■□□□ 1.98
HLA-C-203ENST00000383329 KRT24Q2M2I5 525 aa27.41■■□□□ 1.98
HLA-C-203ENST00000383329 PROM2Q8N271 834 aa27.41■■□□□ 1.98
HLA-C-203ENST00000383329 CANXP27824 592 aaKnown RBP27.4■■□□□ 1.98
HLA-C-203ENST00000383329 NFATC2IPQ8NCF5 419 aa27.4■■□□□ 1.98
HLA-C-203ENST00000383329 FRAT1Q92837 279 aaPredicted RBP27.4■■□□□ 1.98
HLA-C-203ENST00000383329 BTAF1O14981 1849 aa27.4■■□□□ 1.98
HLA-C-203ENST00000383329 EIF4A1P60842 406 aaKnown RBP27.39■■□□□ 1.98
HLA-C-203ENST00000383329 IPO8O15397 1037 aaKnown RBP27.39■■□□□ 1.97
HLA-C-203ENST00000383329 CABP4P57796 275 aa27.39■■□□□ 1.97
HLA-C-203ENST00000383329 MRPL50Q8N5N7 158 aaKnown RBP27.39■■□□□ 1.97
HLA-C-203ENST00000383329 SCN11AQ9UI33 1791 aa27.38■■□□□ 1.97
HLA-C-203ENST00000383329 ZKSCAN2Q63HK3 967 aa27.38■■□□□ 1.97
HLA-C-203ENST00000383329 CHMP4AQ9BY43 222 aa27.38■■□□□ 1.97
HLA-C-203ENST00000383329 DOT1LQ8TEK3 1739 aa27.37■■□□□ 1.97
HLA-C-203ENST00000383329 MS4A1P11836 297 aa27.37■■□□□ 1.97
HLA-C-203ENST00000383329 C20orf194Q5TEA3 1177 aa27.37■■□□□ 1.97
HLA-C-203ENST00000383329 PPP4R2Q9NY27 417 aa27.36■■□□□ 1.97
HLA-C-203ENST00000383329 KIF16BQ96L93 1317 aa27.36■■□□□ 1.97
HLA-C-203ENST00000383329 VIRMAQ69YN4 1812 aaKnown RBP27.36■■□□□ 1.97
HLA-C-203ENST00000383329 KCNQ3O43525 872 aa27.35■■□□□ 1.97
HLA-C-203ENST00000383329 TXNRD1Q16881 649 aa27.35■■□□□ 1.97
HLA-C-203ENST00000383329 NOB1Q9ULX3 412 aaKnown RBP27.35■■□□□ 1.97
HLA-C-203ENST00000383329 HOXB7P09629 217 aa27.35■■□□□ 1.97
HLA-C-203ENST00000383329 PRIM1P49642 420 aaKnown RBP27.35■■□□□ 1.97
HLA-C-203ENST00000383329 NBPF14Q5TI25 921 aa27.34■■□□□ 1.97
HLA-C-203ENST00000383329 ARHGAP45Q92619 1136 aa27.34■■□□□ 1.97
HLA-C-203ENST00000383329 SYTL4Q96C24 671 aaPredicted RBP27.34■■□□□ 1.97
HLA-C-203ENST00000383329 EXOC6Q8TAG9 804 aa27.33■■□□□ 1.97
HLA-C-203ENST00000383329 CCDC30Q5VVM6 783 aa27.32■■□□□ 1.96
HLA-C-203ENST00000383329 ZNF790Q6PG37 636 aa27.32■■□□□ 1.96
HLA-C-203ENST00000383329 CRBNQ96SW2 442 aa27.32■■□□□ 1.96
HLA-C-203ENST00000383329 ANO8Q9HCE9 1232 aaPredicted RBP27.32■■□□□ 1.96
HLA-C-203ENST00000383329 MRC1P22897 1456 aa27.32■■□□□ 1.96
HLA-C-203ENST00000383329 SIPA1L3O60292 1781 aaPredicted RBP27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms