RNA–Protein interactions for RNA: ENST00000381718.7

NUP58-201, Transcript of nucleoporin 58, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene NUP58, Length 2,489 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-201ENST00000381718 KDM4FA0A1W2PPD8 638 aa20.34■□□□□ 0.85
NUP58-201ENST00000381718 EIF4A1P60842 406 aaKnown RBP20.34■□□□□ 0.85
NUP58-201ENST00000381718 ANKRD45Q5TZF3 282 aa20.34■□□□□ 0.85
NUP58-201ENST00000381718 CEP85Q6P2H3 762 aa20.34■□□□□ 0.85
NUP58-201ENST00000381718 DDX17Q92841 729 aaKnown RBP20.34■□□□□ 0.85
NUP58-201ENST00000381718 N4BP2Q86UW6 1770 aaPredicted RBP20.34■□□□□ 0.85
NUP58-201ENST00000381718 MEIS3Q99687 375 aa20.34■□□□□ 0.85
NUP58-201ENST00000381718 PXDNLA1KZ92 1463 aa20.34■□□□□ 0.85
NUP58-201ENST00000381718 SPATA31A3Q5VYP0 1347 aa20.33■□□□□ 0.85
NUP58-201ENST00000381718 RNMTO43148 476 aaKnown RBP20.33■□□□□ 0.84
NUP58-201ENST00000381718 ZC3H6P61129 1189 aaKnown RBP20.33■□□□□ 0.84
NUP58-201ENST00000381718 BMP2KLQ5H9B9 411 aa20.32■□□□□ 0.84
NUP58-201ENST00000381718 TBC1D32Q96NH3 1257 aa20.32■□□□□ 0.84
NUP58-201ENST00000381718 CHMP4AQ9BY43 222 aa20.32■□□□□ 0.84
NUP58-201ENST00000381718 F6X3S4 739 aa20.32■□□□□ 0.84
NUP58-201ENST00000381718 C1orf141Q5JVX7 400 aa20.31■□□□□ 0.84
NUP58-201ENST00000381718 UPF2Q9HAU5 1272 aaKnown RBP20.31■□□□□ 0.84
NUP58-201ENST00000381718 CPDO75976 1380 aa20.31■□□□□ 0.84
NUP58-201ENST00000381718 TEFQ10587 303 aa20.3■□□□□ 0.84
NUP58-201ENST00000381718 HDGFL1Q5TGJ6 251 aa20.3■□□□□ 0.84
NUP58-201ENST00000381718 MPRIPQ6WCQ1 1025 aa20.3■□□□□ 0.84
NUP58-201ENST00000381718 PLEKHG5O94827 1062 aa20.3■□□□□ 0.84
NUP58-201ENST00000381718 HEG1Q9ULI3 1381 aa20.3■□□□□ 0.84
NUP58-201ENST00000381718 SIPA1L3O60292 1781 aaPredicted RBP20.3■□□□□ 0.84
NUP58-201ENST00000381718 FKBP5Q13451 457 aaPredicted RBP20.29■□□□□ 0.84
NUP58-201ENST00000381718 BTBD11A6QL63 1104 aa20.29■□□□□ 0.84
NUP58-201ENST00000381718 BRINP3Q76B58 766 aa20.29■□□□□ 0.84
NUP58-201ENST00000381718 SLC4A10Q6U841 1118 aa20.28■□□□□ 0.84
NUP58-201ENST00000381718 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.28■□□□□ 0.841e-6■■□□□ 14
NUP58-201ENST00000381718 KCNQ3O43525 872 aa20.26■□□□□ 0.83
NUP58-201ENST00000381718 NECTIN2Q92692 538 aa20.26■□□□□ 0.83
NUP58-201ENST00000381718 GNAI3P08754 354 aa20.25■□□□□ 0.83
NUP58-201ENST00000381718 HMMRO75330 724 aa20.25■□□□□ 0.83
NUP58-201ENST00000381718 GNAI2P04899 355 aa20.25■□□□□ 0.83
NUP58-201ENST00000381718 CABLES1Q8TDN4 633 aa20.25■□□□□ 0.83
NUP58-201ENST00000381718 RAPGEF4Q8WZA2 1011 aa20.24■□□□□ 0.83
NUP58-201ENST00000381718 SOS2Q07890 1332 aaPredicted RBP20.24■□□□□ 0.83
NUP58-201ENST00000381718 MEGF6O75095 1541 aa20.23■□□□□ 0.83
NUP58-201ENST00000381718 PLEKHM2Q8IWE5 1019 aa20.23■□□□□ 0.83
NUP58-201ENST00000381718 PHAXQ9H814 394 aaKnown RBP20.23■□□□□ 0.83
NUP58-201ENST00000381718 NLRP2Q9NX02 1062 aa20.23■□□□□ 0.83
NUP58-201ENST00000381718 DAXXQ9UER7 740 aaPredicted RBP20.23■□□□□ 0.83
NUP58-201ENST00000381718 ZNF335Q9H4Z2 1342 aaPredicted RBP20.22■□□□□ 0.83
NUP58-201ENST00000381718 SCN11AQ9UI33 1791 aa20.22■□□□□ 0.83
NUP58-201ENST00000381718 GIGYF1O75420 1035 aaPredicted RBP20.21■□□□□ 0.83
NUP58-201ENST00000381718 TATP17735 454 aaPredicted RBP20.21■□□□□ 0.83
NUP58-201ENST00000381718 SLC4A3P48751 1232 aa20.21■□□□□ 0.83
NUP58-201ENST00000381718 SLAIN2Q9P270 581 aa20.21■□□□□ 0.83
NUP58-201ENST00000381718 CHPF2Q9P2E5 772 aa20.21■□□□□ 0.83
NUP58-201ENST00000381718 KDM6AO15550 1401 aaPredicted RBP20.21■□□□□ 0.83
NUP58-201ENST00000381718 EIF2S2P20042 333 aaKnown RBP20.2■□□□□ 0.82
NUP58-201ENST00000381718 C22orf23Q9BZE7 217 aa20.2■□□□□ 0.82
NUP58-201ENST00000381718 USP44Q9H0E7 712 aa20.2■□□□□ 0.82
NUP58-201ENST00000381718 SPG7Q9UQ90 795 aa20.2■□□□□ 0.82
NUP58-201ENST00000381718 PKD1L3Q7Z443 1732 aa20.2■□□□□ 0.82
NUP58-201ENST00000381718 PHKG2P15735 406 aa20.2■□□□□ 0.82
NUP58-201ENST00000381718 MRC1P22897 1456 aa20.19■□□□□ 0.82
NUP58-201ENST00000381718 DBF4Q9UBU7 674 aaPredicted RBP20.19■□□□□ 0.82
NUP58-201ENST00000381718 MFAP1P55081 439 aaKnown RBP20.18■□□□□ 0.82
NUP58-201ENST00000381718 ATP8B2P98198 1209 aa20.18■□□□□ 0.82
NUP58-201ENST00000381718 CHRNA2Q15822 529 aa20.18■□□□□ 0.82
NUP58-201ENST00000381718 BECN1Q14457 450 aa20.18■□□□□ 0.82
NUP58-201ENST00000381718 GSPT1P15170 499 aaKnown RBP20.17■□□□□ 0.82
NUP58-201ENST00000381718 RBM25P49756 843 aaKnown RBP20.17■□□□□ 0.82
NUP58-201ENST00000381718 SLC52A2Q9HAB3 445 aa20.17■□□□□ 0.82
NUP58-201ENST00000381718 IFNL2Q8IZJ0 200 aa20.17■□□□□ 0.82
NUP58-201ENST00000381718 CSB-PGBD3P0DP91 1061 aa20.16■□□□□ 0.82
NUP58-201ENST00000381718 TTC22Q5TAA0 569 aa20.16■□□□□ 0.82
NUP58-201ENST00000381718 SRCIN1Q9C0H9 1055 aa20.16■□□□□ 0.82
NUP58-201ENST00000381718 BEND3Q5T5X7 828 aa20.16■□□□□ 0.82
NUP58-201ENST00000381718 C16orf71Q8IYS4 520 aaPredicted RBP20.16■□□□□ 0.82
NUP58-201ENST00000381718 DNAAF4Q8WXU2 420 aa20.16■□□□□ 0.82
NUP58-201ENST00000381718 ADCY9O60503 1353 aa20.15■□□□□ 0.82
NUP58-201ENST00000381718 TBC1D9Q6ZT07 1266 aa20.15■□□□□ 0.82
NUP58-201ENST00000381718 PI4KAP2A4QPH2 592 aa20.14■□□□□ 0.82
NUP58-201ENST00000381718 NBR1Q14596 966 aa20.14■□□□□ 0.82
NUP58-201ENST00000381718 ZNF790Q6PG37 636 aa20.14■□□□□ 0.82
NUP58-201ENST00000381718 PI4KAP1Q8N8J0 262 aa20.14■□□□□ 0.82
NUP58-201ENST00000381718 OSBPL3Q9H4L5 887 aa20.14■□□□□ 0.82
NUP58-201ENST00000381718 PNMA6EA0A0J9YXQ4 647 aa20.14■□□□□ 0.81
NUP58-201ENST00000381718 UBTFL1P0CB47 393 aaPredicted RBP20.14■□□□□ 0.81
NUP58-201ENST00000381718 DCAF5Q96JK2 942 aa20.14■□□□□ 0.81
NUP58-201ENST00000381718 LRRFIP2Q9Y608 721 aaKnown RBP20.14■□□□□ 0.81
NUP58-201ENST00000381718 CYP27B1O15528 508 aa20.13■□□□□ 0.81
NUP58-201ENST00000381718 USP35Q9P2H5 1018 aa20.13■□□□□ 0.81
NUP58-201ENST00000381718 ABCA3Q99758 1704 aa20.13■□□□□ 0.81
NUP58-201ENST00000381718 PARP4Q9UKK3 1724 aaKnown RBP20.13■□□□□ 0.81
NUP58-201ENST00000381718 CDC45O75419 566 aa20.13■□□□□ 0.81
NUP58-201ENST00000381718 OTUD7AQ8TE49 926 aaPredicted RBP20.13■□□□□ 0.81
NUP58-201ENST00000381718 WDR17Q8IZU2 1322 aa20.13■□□□□ 0.81
NUP58-201ENST00000381718 IBTKQ9P2D0 1353 aaPredicted RBP20.12■□□□□ 0.81
NUP58-201ENST00000381718 SMARCA5O60264 1052 aaPredicted RBP20.12■□□□□ 0.81
NUP58-201ENST00000381718 SSH3Q8TE77 659 aa20.12■□□□□ 0.81
NUP58-201ENST00000381718 HYPKQ9NX55 129 aa20.12■□□□□ 0.81
NUP58-201ENST00000381718 NHSL1Q5SYE7 1610 aa20.12■□□□□ 0.81
NUP58-201ENST00000381718 EIF5BO60841 1220 aaKnown RBP20.12■□□□□ 0.81
NUP58-201ENST00000381718 HSP90AB1P08238 724 aaKnown RBP20.12■□□□□ 0.81
NUP58-201ENST00000381718 SALL3Q9BXA9 1300 aa20.12■□□□□ 0.81
NUP58-201ENST00000381718 TBC1D2Q9BYX2 928 aa20.11■□□□□ 0.81
NUP58-201ENST00000381718 COL5A2P05997 1499 aaPredicted RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms