RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 SALL2Q9Y467 1007 aaPredicted RBP20.3■□□□□ 0.84
PDGFB-202ENST00000381551 APBA3O96018 575 aa20.29■□□□□ 0.84
PDGFB-202ENST00000381551 TAF7Q15545 349 aaPredicted RBP20.29■□□□□ 0.84
PDGFB-202ENST00000381551 WWC1Q8IX03 1113 aa20.29■□□□□ 0.84
PDGFB-202ENST00000381551 VIRMAQ69YN4 1812 aaKnown RBP20.29■□□□□ 0.84
PDGFB-202ENST00000381551 ATG3Q9NT62 314 aa20.28■□□□□ 0.84
PDGFB-202ENST00000381551 MRC1P22897 1456 aa20.27■□□□□ 0.84
PDGFB-202ENST00000381551 ASAP1Q9ULH1 1129 aa20.27■□□□□ 0.84
PDGFB-202ENST00000381551 PLSCR1O15162 318 aa20.26■□□□□ 0.83
PDGFB-202ENST00000381551 SF3B2Q13435 895 aaKnown RBP20.26■□□□□ 0.83
PDGFB-202ENST00000381551 BTBD11A6QL63 1104 aa20.25■□□□□ 0.83
PDGFB-202ENST00000381551 MIS18AQ9NYP9 233 aa20.25■□□□□ 0.83
PDGFB-202ENST00000381551 SLC39A6Q13433 755 aa20.24■□□□□ 0.83
PDGFB-202ENST00000381551 SMARCC1Q92922 1105 aaPredicted RBP20.24■□□□□ 0.83
PDGFB-202ENST00000381551 BTAF1O14981 1849 aa20.24■□□□□ 0.83
PDGFB-202ENST00000381551 CALD1Q05682 793 aaKnown RBP20.23■□□□□ 0.83
PDGFB-202ENST00000381551 WDR63Q8IWG1 891 aa20.23■□□□□ 0.83
PDGFB-202ENST00000381551 BABAM1Q9NWV8 329 aa20.23■□□□□ 0.83
PDGFB-202ENST00000381551 TNS1Q9HBL0 1735 aaKnown RBP20.22■□□□□ 0.83
PDGFB-202ENST00000381551 SIPA1L3O60292 1781 aaPredicted RBP20.22■□□□□ 0.83
PDGFB-202ENST00000381551 CHL1O00533 1208 aa20.22■□□□□ 0.83
PDGFB-202ENST00000381551 BAG6P46379 1132 aa20.22■□□□□ 0.83
PDGFB-202ENST00000381551 EN1Q05925 392 aaPredicted RBP20.22■□□□□ 0.83
PDGFB-202ENST00000381551 ZNF790Q6PG37 636 aa20.22■□□□□ 0.83
PDGFB-202ENST00000381551 DEFB132Q7Z7B7 95 aa20.22■□□□□ 0.83
PDGFB-202ENST00000381551 CAMKK2Q96RR4 588 aa20.22■□□□□ 0.83
PDGFB-202ENST00000381551 ZNF521Q96K83 1311 aa20.22■□□□□ 0.83
PDGFB-202ENST00000381551 KCNQ3O43525 872 aa20.21■□□□□ 0.83
PDGFB-202ENST00000381551 ZNF853P0CG23 659 aa20.21■□□□□ 0.83
PDGFB-202ENST00000381551 PROM2Q8N271 834 aa20.21■□□□□ 0.83
PDGFB-202ENST00000381551 CFAP44Q96MT7 982 aa20.21■□□□□ 0.83
PDGFB-202ENST00000381551 HNRNPUQ00839 825 aaKnown RBP eCLIP20.2■□□□□ 0.82
PDGFB-202ENST00000381551 PALLDQ8WX93 1383 aa20.2■□□□□ 0.82
PDGFB-202ENST00000381551 GNAI1P63096 354 aa20.19■□□□□ 0.82
PDGFB-202ENST00000381551 EZH2Q15910 746 aaKnown RBP20.19■□□□□ 0.82
PDGFB-202ENST00000381551 IFT57Q9NWB7 429 aa20.19■□□□□ 0.82
PDGFB-202ENST00000381551 LAS1LQ9Y4W2 734 aaKnown RBP20.19■□□□□ 0.82
PDGFB-202ENST00000381551 IL16Q14005 1332 aa20.19■□□□□ 0.82
PDGFB-202ENST00000381551 PTCD1O75127 700 aaKnown RBP20.18■□□□□ 0.82
PDGFB-202ENST00000381551 TXNRD1Q16881 649 aa20.18■□□□□ 0.82
PDGFB-202ENST00000381551 TTC5Q8N0Z6 440 aa20.18■□□□□ 0.82
PDGFB-202ENST00000381551 TSPYL4Q9UJ04 414 aa20.18■□□□□ 0.82
PDGFB-202ENST00000381551 LOC102724428A0A0B4J2F2 783 aa20.17■□□□□ 0.82
PDGFB-202ENST00000381551 SIK1P57059 783 aa20.17■□□□□ 0.82
PDGFB-202ENST00000381551 ZNF496Q96IT1 587 aaPredicted RBP20.17■□□□□ 0.82
PDGFB-202ENST00000381551 SLC4A9Q96Q91 983 aa20.17■□□□□ 0.82
PDGFB-202ENST00000381551 RBM42Q9BTD8 480 aaKnown RBP20.17■□□□□ 0.82
PDGFB-202ENST00000381551 SPINK5Q9NQ38 1064 aaPredicted RBP20.16■□□□□ 0.82
PDGFB-202ENST00000381551 MBIPQ9NS73 344 aa20.16■□□□□ 0.82
PDGFB-202ENST00000381551 KCNQ4P56696 695 aa20.15■□□□□ 0.82
PDGFB-202ENST00000381551 EIF4A1P60842 406 aaKnown RBP20.15■□□□□ 0.82
PDGFB-202ENST00000381551 SLC27A3Q5K4L6 730 aa20.15■□□□□ 0.82
PDGFB-202ENST00000381551 FMNL2Q96PY5 1086 aa20.15■□□□□ 0.82
PDGFB-202ENST00000381551 LRRC4BQ9NT99 713 aa20.15■□□□□ 0.82
PDGFB-202ENST00000381551 CCNL1Q9UK58 526 aaPredicted RBP20.15■□□□□ 0.82
PDGFB-202ENST00000381551 LY75O60449 1722 aa20.14■□□□□ 0.81
PDGFB-202ENST00000381551 PAPPAQ13219 1627 aa20.14■□□□□ 0.81
PDGFB-202ENST00000381551 ATP6V1AP38606 617 aa20.14■□□□□ 0.81
PDGFB-202ENST00000381551 GOLGA2Q08379 1002 aa20.14■□□□□ 0.81
PDGFB-202ENST00000381551 VSIG10Q8N0Z9 540 aa20.14■□□□□ 0.81
PDGFB-202ENST00000381551 KCPQ6ZWJ8 1503 aa20.13■□□□□ 0.81
PDGFB-202ENST00000381551 ITPK1Q13572 414 aa20.12■□□□□ 0.81
PDGFB-202ENST00000381551 RGPD3A6NKT7 1758 aaPredicted RBP20.11■□□□□ 0.81
PDGFB-202ENST00000381551 KDM3BQ7LBC6 1761 aa20.11■□□□□ 0.81
PDGFB-202ENST00000381551 RGPD4Q7Z3J3 1758 aa20.11■□□□□ 0.81
PDGFB-202ENST00000381551 HEG1Q9ULI3 1381 aa20.11■□□□□ 0.81
PDGFB-202ENST00000381551 TSR2Q969E8 191 aaKnown RBP20.11■□□□□ 0.81
PDGFB-202ENST00000381551 CDCA7LQ96GN5 454 aa20.11■□□□□ 0.81
PDGFB-202ENST00000381551 UBR2Q8IWV8 1755 aa20.11■□□□□ 0.81
PDGFB-202ENST00000381551 ZBED9Q6R2W3 1325 aa20.1■□□□□ 0.81
PDGFB-202ENST00000381551 GIGYF1O75420 1035 aaPredicted RBP20.1■□□□□ 0.81
PDGFB-202ENST00000381551 SNRPA1P09661 255 aaKnown RBP20.1■□□□□ 0.81
PDGFB-202ENST00000381551 SLFN5Q08AF3 891 aa20.1■□□□□ 0.81
PDGFB-202ENST00000381551 E9PSI1 815 aa20.09■□□□□ 0.81
PDGFB-202ENST00000381551 DNAJC10Q8IXB1 793 aa20.09■□□□□ 0.81
PDGFB-202ENST00000381551 TEX13AQ9BXU3 409 aaPredicted RBP20.09■□□□□ 0.81
PDGFB-202ENST00000381551 MYH16Q9H6N6 1097 aa20.09■□□□□ 0.81
PDGFB-202ENST00000381551 PRAMEF22A3QJZ6 481 aa20.08■□□□□ 0.81
PDGFB-202ENST00000381551 HMGB2P26583 209 aaKnown RBP20.08■□□□□ 0.81
PDGFB-202ENST00000381551 KRT24Q2M2I5 525 aa20.08■□□□□ 0.81
PDGFB-202ENST00000381551 TRMT2AQ8IZ69 625 aaKnown RBP20.08■□□□□ 0.81
PDGFB-202ENST00000381551 FANCIQ9NVI1 1328 aa20.07■□□□□ 0.8
PDGFB-202ENST00000381551 ZNF831Q5JPB2 1677 aa20.07■□□□□ 0.8
PDGFB-202ENST00000381551 LINC00116Q8NCU8 138 aa20.07■□□□□ 0.8
PDGFB-202ENST00000381551 USP16Q9Y5T5 823 aa20.07■□□□□ 0.8
PDGFB-202ENST00000381551 CYP19A1P11511 503 aaPredicted RBP20.06■□□□□ 0.8
PDGFB-202ENST00000381551 C8orf58Q8NAV2 365 aa20.06■□□□□ 0.8
PDGFB-202ENST00000381551 STARD3NLO95772 234 aa20.04■□□□□ 0.8
PDGFB-202ENST00000381551 DUSP27Q5VZP5 1158 aa20.04■□□□□ 0.8
PDGFB-202ENST00000381551 YTHDC1Q96MU7 727 aaKnown RBP20.04■□□□□ 0.8
PDGFB-202ENST00000381551 RREB1Q92766 1687 aa20.03■□□□□ 0.8
PDGFB-202ENST00000381551 ELL2O00472 640 aaPredicted RBP20.03■□□□□ 0.8
PDGFB-202ENST00000381551 EXOSC9Q06265 439 aaKnown RBP20.03■□□□□ 0.8
PDGFB-202ENST00000381551 RC3H1Q5TC82 1133 aaKnown RBP20.03■□□□□ 0.8
PDGFB-202ENST00000381551 INTS5Q6P9B9 1019 aaKnown RBP20.03■□□□□ 0.8
PDGFB-202ENST00000381551 TSPYL6Q8N831 410 aa20.03■□□□□ 0.8
PDGFB-202ENST00000381551 AKT1S1Q96B36 256 aa20.03■□□□□ 0.8
PDGFB-202ENST00000381551 TJP1Q07157 1748 aa20.02■□□□□ 0.8
PDGFB-202ENST00000381551 TAF1LQ8IZX4 1826 aa20.02■□□□□ 0.8
PDGFB-202ENST00000381551 HOXB7P09629 217 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms