RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 TFCP2L1Q9NZI6 479 aa21.44■■□□□ 1.02
SNRPB-201ENST00000381342 PAPPAQ13219 1627 aa21.44■■□□□ 1.02
SNRPB-201ENST00000381342 NEFMP07197 916 aa21.43■■□□□ 1.02
SNRPB-201ENST00000381342 MTFR1LQ9H019 292 aa21.43■■□□□ 1.02
SNRPB-201ENST00000381342 PNNQ9H307 717 aaKnown RBP21.43■■□□□ 1.02
SNRPB-201ENST00000381342 ATF5Q9Y2D1 282 aaPredicted RBP21.43■■□□□ 1.02
SNRPB-201ENST00000381342 DCAF8L1A6NGE4 600 aa21.42■■□□□ 1.02
SNRPB-201ENST00000381342 GNAT3A8MTJ3 354 aa21.42■■□□□ 1.02
SNRPB-201ENST00000381342 LGR6Q9HBX8 967 aa21.42■■□□□ 1.02
SNRPB-201ENST00000381342 ERVV-2B6SEH9 535 aa21.41■■□□□ 1.02
SNRPB-201ENST00000381342 RNMTO43148 476 aaKnown RBP21.41■■□□□ 1.02
SNRPB-201ENST00000381342 KCNQ4P56696 695 aa21.41■■□□□ 1.02
SNRPB-201ENST00000381342 ZNF827Q17R98 1081 aa21.41■■□□□ 1.02
SNRPB-201ENST00000381342 PIGBQ92521 554 aa21.41■■□□□ 1.02
SNRPB-201ENST00000381342 AKT1S1Q96B36 256 aa21.41■■□□□ 1.02
SNRPB-201ENST00000381342 PALLDQ8WX93 1383 aa21.4■■□□□ 1.02
SNRPB-201ENST00000381342 PDGFDQ9GZP0 370 aaPredicted RBP21.4■■□□□ 1.02
SNRPB-201ENST00000381342 CABP4P57796 275 aa21.39■■□□□ 1.01
SNRPB-201ENST00000381342 NFE2L2Q16236 605 aa21.39■■□□□ 1.01
SNRPB-201ENST00000381342 PNISRQ8TF01 805 aaKnown RBP21.39■■□□□ 1.01
SNRPB-201ENST00000381342 SLC16A10Q8TF71 515 aa21.39■■□□□ 1.01
SNRPB-201ENST00000381342 MSH5O43196 834 aa21.38■■□□□ 1.01
SNRPB-201ENST00000381342 RUNDC1Q96C34 613 aa21.38■■□□□ 1.01
SNRPB-201ENST00000381342 C5P01031 1676 aa21.37■■□□□ 1.01
SNRPB-201ENST00000381342 TAF1LQ8IZX4 1826 aa21.37■■□□□ 1.01
SNRPB-201ENST00000381342 IL17REQ8NFR9 667 aa21.37■■□□□ 1.01
SNRPB-201ENST00000381342 CEMIPQ8WUJ3 1361 aa21.36■■□□□ 1.01
SNRPB-201ENST00000381342 CASZ1Q86V15 1759 aa21.36■■□□□ 1.01
SNRPB-201ENST00000381342 UBR2Q8IWV8 1755 aa21.36■■□□□ 1.01
SNRPB-201ENST00000381342 SRCAPQ6ZRS2 3230 aa21.36■■□□□ 1.01
SNRPB-201ENST00000381342 MCM10Q7L590 875 aa21.36■■□□□ 1.01
SNRPB-201ENST00000381342 SLC52A2Q9HAB3 445 aa21.36■■□□□ 1.01
SNRPB-201ENST00000381342 DCTN1Q14203 1278 aa21.35■■□□□ 1.01
SNRPB-201ENST00000381342 NFATC2IPQ8NCF5 419 aa21.35■■□□□ 1.01
SNRPB-201ENST00000381342 RTF1Q92541 710 aaKnown RBP21.35■■□□□ 1.01
SNRPB-201ENST00000381342 ASAP1Q9ULH1 1129 aa21.35■■□□□ 1.01
SNRPB-201ENST00000381342 RRP7AQ9Y3A4 280 aaKnown RBP21.35■■□□□ 1.01
SNRPB-201ENST00000381342 POLD1P28340 1107 aa21.34■■□□□ 1.01
SNRPB-201ENST00000381342 TMPOP42166 694 aaKnown RBP21.34■■□□□ 1.01
SNRPB-201ENST00000381342 FLAD1Q8NFF5 587 aa21.34■■□□□ 1.01
SNRPB-201ENST00000381342 MIER1Q8N108 512 aa21.33■■□□□ 1.01
SNRPB-201ENST00000381342 AK7Q96M32 723 aa21.33■■□□□ 1.01
SNRPB-201ENST00000381342 ATG3Q9NT62 314 aa21.33■■□□□ 1.01
SNRPB-201ENST00000381342 PNPLA7Q6ZV29 1317 aa21.32■■□□□ 1
SNRPB-201ENST00000381342 TUBGCP6Q96RT7 1819 aa21.32■■□□□ 1
SNRPB-201ENST00000381342 ZNF831Q5JPB2 1677 aa21.32■■□□□ 1
SNRPB-201ENST00000381342 LOC102724428A0A0B4J2F2 783 aa21.32■■□□□ 1
SNRPB-201ENST00000381342 SIK1P57059 783 aa21.32■■□□□ 1
SNRPB-201ENST00000381342 TEFQ10587 303 aa21.32■■□□□ 1
SNRPB-201ENST00000381342 FAM9BQ8IZU0 186 aa21.32■■□□□ 1
SNRPB-201ENST00000381342 TJP1Q07157 1748 aa21.32■■□□□ 1
SNRPB-201ENST00000381342 KDM3BQ7LBC6 1761 aa21.31■■□□□ 1
SNRPB-201ENST00000381342 KCPQ6ZWJ8 1503 aa21.31■■□□□ 1
SNRPB-201ENST00000381342 CICQ96RK0 1608 aaPredicted RBP21.31■■□□□ 1
SNRPB-201ENST00000381342 CCER2I3L3R5 266 aa21.31■■□□□ 1
SNRPB-201ENST00000381342 HTATSF1O43719 755 aaKnown RBP21.31■■□□□ 1
SNRPB-201ENST00000381342 ATP6V1AP38606 617 aa21.31■■□□□ 1
SNRPB-201ENST00000381342 PTGER2P43116 358 aa21.31■■□□□ 1
SNRPB-201ENST00000381342 RIPK4P57078 832 aa21.31■■□□□ 1
SNRPB-201ENST00000381342 NEUROD2Q15784 382 aa21.31■■□□□ 1
SNRPB-201ENST00000381342 ARXQ96QS3 562 aa21.31■■□□□ 1
SNRPB-201ENST00000381342 COL5A3P25940 1745 aaPredicted RBP21.31■■□□□ 1
SNRPB-201ENST00000381342 THUMPD2Q9BTF0 503 aaKnown RBP21.3■■□□□ 1
SNRPB-201ENST00000381342 APAF1O14727 1248 aa21.29■■□□□ 1
SNRPB-201ENST00000381342 RBM42Q9BTD8 480 aaKnown RBP21.29■■□□□ 1
SNRPB-201ENST00000381342 SENP3-EIF4A1A0A087X0R7 540 aa21.28■■□□□ 1
SNRPB-201ENST00000381342 SLC39A6Q13433 755 aa21.28■■□□□ 1
SNRPB-201ENST00000381342 C4BP0C0L5 1744 aa21.28■■□□□ 1
SNRPB-201ENST00000381342 COL23A1Q86Y22 540 aaPredicted RBP21.27■■□□□ 1
SNRPB-201ENST00000381342 QSER1Q2KHR3 1735 aa21.26■□□□□ 0.99
SNRPB-201ENST00000381342 LMOD3Q0VAK6 560 aa21.26■□□□□ 0.99
SNRPB-201ENST00000381342 PTCD1O75127 700 aaKnown RBP21.25■□□□□ 0.99
SNRPB-201ENST00000381342 KLHL34Q8N239 644 aa21.25■□□□□ 0.99
SNRPB-201ENST00000381342 SGIP1Q9BQI5 828 aa21.25■□□□□ 0.99
SNRPB-201ENST00000381342 TRIM35Q9UPQ4 493 aa21.25■□□□□ 0.99
SNRPB-201ENST00000381342 SLC4A9Q96Q91 983 aa21.24■□□□□ 0.99
SNRPB-201ENST00000381342 FHDC1Q9C0D6 1143 aaPredicted RBP21.24■□□□□ 0.99
SNRPB-201ENST00000381342 BTBD11A6QL63 1104 aa21.23■□□□□ 0.99
SNRPB-201ENST00000381342 PHF14O94880 888 aa21.23■□□□□ 0.99
SNRPB-201ENST00000381342 SYT17Q9BSW7 474 aa21.23■□□□□ 0.99
SNRPB-201ENST00000381342 UBR3Q6ZT12 1888 aa21.22■□□□□ 0.99
SNRPB-201ENST00000381342 SSFA2P28290 1259 aa21.22■□□□□ 0.99
SNRPB-201ENST00000381342 ITPK1Q13572 414 aa21.22■□□□□ 0.99
SNRPB-201ENST00000381342 TTC5Q8N0Z6 440 aa21.22■□□□□ 0.99
SNRPB-201ENST00000381342 LINC00116Q8NCU8 138 aa21.22■□□□□ 0.99
SNRPB-201ENST00000381342 GNPATO15228 680 aa21.21■□□□□ 0.99
SNRPB-201ENST00000381342 KCNQ3O43525 872 aa21.21■□□□□ 0.99
SNRPB-201ENST00000381342 ZNF790Q6PG37 636 aa21.21■□□□□ 0.99
SNRPB-201ENST00000381342 LAMB4A4D0S4 1761 aa21.2■□□□□ 0.99
SNRPB-201ENST00000381342 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.2■□□□□ 0.98
SNRPB-201ENST00000381342 TAF7Q15545 349 aaPredicted RBP21.2■□□□□ 0.98
SNRPB-201ENST00000381342 MIS18AQ9NYP9 233 aa21.2■□□□□ 0.98
SNRPB-201ENST00000381342 MSL1Q68DK7 614 aa21.19■□□□□ 0.98
SNRPB-201ENST00000381342 RTCBQ9Y3I0 505 aaKnown RBP21.19■□□□□ 0.98
SNRPB-201ENST00000381342 MYH14Q7Z406 1995 aaKnown RBP21.19■□□□□ 0.98
SNRPB-201ENST00000381342 ZNF496Q96IT1 587 aaPredicted RBP21.18■□□□□ 0.98
SNRPB-201ENST00000381342 TRAPPC3LQ5T215 181 aa21.17■□□□□ 0.98
SNRPB-201ENST00000381342 RC3H1Q5TC82 1133 aaKnown RBP21.17■□□□□ 0.98
SNRPB-201ENST00000381342 HEG1Q9ULI3 1381 aa21.17■□□□□ 0.98
SNRPB-201ENST00000381342 DNAJC10Q8IXB1 793 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms