RNA–Protein interactions for RNA: ENST00000381254.6

GEN1-202, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GEN1, Length 6,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-202ENST00000381254 RGS12O14924 1447 aa6.72□□□□□ -1.33
GEN1-202ENST00000381254 NSD2O96028 1365 aa6.72□□□□□ -1.33
GEN1-202ENST00000381254 DNMT1P26358 1616 aaKnown RBP6.72□□□□□ -1.33
GEN1-202ENST00000381254 GSE1Q14687 1217 aa6.72□□□□□ -1.33
GEN1-202ENST00000381254 AMOTQ4VCS5 1084 aa6.72□□□□□ -1.33
GEN1-202ENST00000381254 C2CD5Q86YS7 1000 aa6.72□□□□□ -1.33
GEN1-202ENST00000381254 SMC4Q9NTJ3 1288 aa6.72□□□□□ -1.33
GEN1-202ENST00000381254 SPATA31A1Q5TZJ5 1347 aa6.72□□□□□ -1.33
GEN1-202ENST00000381254 FAM177BA6PVY3 158 aa6.72□□□□□ -1.33
GEN1-202ENST00000381254 GPS2Q13227 327 aa6.72□□□□□ -1.33
GEN1-202ENST00000381254 WDR63Q8IWG1 891 aa6.72□□□□□ -1.33
GEN1-202ENST00000381254 PLEKHG2Q9H7P9 1386 aa6.72□□□□□ -1.33
GEN1-202ENST00000381254 HMGN5P82970 282 aaKnown RBP6.72□□□□□ -1.33
GEN1-202ENST00000381254 ERFEQ4G0M1 354 aa6.72□□□□□ -1.33
GEN1-202ENST00000381254 ZNF530Q6P9A1 599 aaPredicted RBP6.72□□□□□ -1.33
GEN1-202ENST00000381254 PNMA8AQ86V59 439 aaPredicted RBP6.72□□□□□ -1.33
GEN1-202ENST00000381254 KIAA0232Q92628 1395 aa6.72□□□□□ -1.33
GEN1-202ENST00000381254 RNF20Q5VTR2 975 aa6.72□□□□□ -1.33
GEN1-202ENST00000381254 DIP2AQ14689 1571 aa6.72□□□□□ -1.33
GEN1-202ENST00000381254 ADGRB3O60242 1522 aa6.72□□□□□ -1.33
GEN1-202ENST00000381254 PRIM1P49642 420 aaKnown RBP6.72□□□□□ -1.33
GEN1-202ENST00000381254 NBPF1Q3BBV0 1214 aa6.72□□□□□ -1.33
GEN1-202ENST00000381254 KRI1Q8N9T8 703 aaKnown RBP6.72□□□□□ -1.33
GEN1-202ENST00000381254 RRAGCQ9HB90 399 aa6.72□□□□□ -1.33
GEN1-202ENST00000381254 MRE11P49959 708 aa6.71□□□□□ -1.33
GEN1-202ENST00000381254 SLC4A8Q2Y0W8 1093 aa6.71□□□□□ -1.33
GEN1-202ENST00000381254 CC2D1BQ5T0F9 858 aaKnown RBP6.71□□□□□ -1.33
GEN1-202ENST00000381254 NBPF6Q5VWK0 638 aa6.71□□□□□ -1.33
GEN1-202ENST00000381254 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.71□□□□□ -1.33
GEN1-202ENST00000381254 NBPF5PQ86XG9 351 aaPredicted RBP6.71□□□□□ -1.33
GEN1-202ENST00000381254 NBPF4Q96M43 638 aa6.71□□□□□ -1.33
GEN1-202ENST00000381254 NYXQ9GZU5 481 aa6.71□□□□□ -1.33
GEN1-202ENST00000381254 IGSF1Q8N6C5 1336 aa6.71□□□□□ -1.33
GEN1-202ENST00000381254 HIP1O00291 1037 aa6.71□□□□□ -1.33
GEN1-202ENST00000381254 RICTORQ6R327 1708 aa6.71□□□□□ -1.34
GEN1-202ENST00000381254 PRKAG2Q9UGJ0 569 aa6.71□□□□□ -1.34
GEN1-202ENST00000381254 USP19O94966 1318 aa6.71□□□□□ -1.34
GEN1-202ENST00000381254 PLSCR1O15162 318 aa6.71□□□□□ -1.34
GEN1-202ENST00000381254 PDCP20941 246 aa6.71□□□□□ -1.34
GEN1-202ENST00000381254 ALDH1B1P30837 517 aa6.71□□□□□ -1.34
GEN1-202ENST00000381254 C9orf131Q5VYM1 1079 aa6.71□□□□□ -1.34
GEN1-202ENST00000381254 LARGE2Q8N3Y3 721 aa6.71□□□□□ -1.34
GEN1-202ENST00000381254 TAOK2Q9UL54 1235 aa6.71□□□□□ -1.34
GEN1-202ENST00000381254 CCP110O43303 1012 aa6.7□□□□□ -1.34
GEN1-202ENST00000381254 ZKSCAN1P17029 563 aaPredicted RBP6.7□□□□□ -1.34
GEN1-202ENST00000381254 AKAP4Q5JQC9 854 aa6.7□□□□□ -1.34
GEN1-202ENST00000381254 HOOK1Q9UJC3 728 aaKnown RBP6.7□□□□□ -1.34
GEN1-202ENST00000381254 PPRC1Q5VV67 1664 aaKnown RBP6.7□□□□□ -1.34
GEN1-202ENST00000381254 NWD1Q149M9 1564 aa6.7□□□□□ -1.34
GEN1-202ENST00000381254 RBM46Q8TBY0 533 aaKnown RBP6.7□□□□□ -1.34
GEN1-202ENST00000381254 ABCC5O15440 1437 aa6.7□□□□□ -1.34
GEN1-202ENST00000381254 TGFB2P61812 414 aa6.7□□□□□ -1.34
GEN1-202ENST00000381254 VPS37DQ86XT2 251 aa6.7□□□□□ -1.34
GEN1-202ENST00000381254 TTLL6Q8N841 843 aa6.7□□□□□ -1.34
GEN1-202ENST00000381254 PNISRQ8TF01 805 aaKnown RBP6.7□□□□□ -1.34
GEN1-202ENST00000381254 EYA3Q99504 573 aa6.7□□□□□ -1.34
GEN1-202ENST00000381254 LAS1LQ9Y4W2 734 aaKnown RBP6.7□□□□□ -1.34
GEN1-202ENST00000381254 ZC3H13Q5T200 1668 aaKnown RBP6.7□□□□□ -1.34
GEN1-202ENST00000381254 CA12O43570 354 aa6.7□□□□□ -1.34
GEN1-202ENST00000381254 C14orf93Q9H972 538 aaKnown RBP6.7□□□□□ -1.34
GEN1-202ENST00000381254 RBM5P52756 815 aaKnown RBP eCLIP6.7□□□□□ -1.34
GEN1-202ENST00000381254 MFAP1P55081 439 aaKnown RBP6.7□□□□□ -1.34
GEN1-202ENST00000381254 ITPRIPQ8IWB1 547 aa6.7□□□□□ -1.34
GEN1-202ENST00000381254 DZIP1LQ8IYY4 767 aaKnown RBP6.7□□□□□ -1.34
GEN1-202ENST00000381254 HACL1Q9UJ83 578 aa6.7□□□□□ -1.34
GEN1-202ENST00000381254 GNAI3P08754 354 aa6.69□□□□□ -1.34
GEN1-202ENST00000381254 PIK3C2GO75747 1445 aa6.69□□□□□ -1.34
GEN1-202ENST00000381254 FAM184AQ8NB25 1140 aa6.69□□□□□ -1.34
GEN1-202ENST00000381254 RGS17Q9UGC6 210 aaPredicted RBP6.69□□□□□ -1.34
GEN1-202ENST00000381254 MKRN1Q9UHC7 482 aaKnown RBP6.69□□□□□ -1.34
GEN1-202ENST00000381254 OGFOD1Q8N543 542 aa6.69□□□□□ -1.34
GEN1-202ENST00000381254 RBM17Q96I25 401 aaKnown RBP6.69□□□□□ -1.34
GEN1-202ENST00000381254 DDX58O95786 925 aaKnown RBP6.69□□□□□ -1.34
GEN1-202ENST00000381254 IRX6P78412 446 aaPredicted RBP6.69□□□□□ -1.34
GEN1-202ENST00000381254 INTS3Q68E01 1043 aaKnown RBP6.69□□□□□ -1.34
GEN1-202ENST00000381254 SULF1Q8IWU6 871 aa6.69□□□□□ -1.34
GEN1-202ENST00000381254 ARHGEF5Q12774 1597 aa6.69□□□□□ -1.34
GEN1-202ENST00000381254 ERC2O15083 957 aa6.69□□□□□ -1.34
GEN1-202ENST00000381254 TNIP1Q15025 636 aa6.69□□□□□ -1.34
GEN1-202ENST00000381254 NEUROD2Q15784 382 aa6.69□□□□□ -1.34
GEN1-202ENST00000381254 GRIPAP1Q4V328 841 aa6.69□□□□□ -1.34
GEN1-202ENST00000381254 ASXL1Q8IXJ9 1541 aa6.69□□□□□ -1.34
GEN1-202ENST00000381254 RABEP1Q15276 862 aa6.68□□□□□ -1.34
GEN1-202ENST00000381254 TAOK3Q9H2K8 898 aa6.68□□□□□ -1.34
GEN1-202ENST00000381254 TPM1P09493 284 aa6.68□□□□□ -1.34
GEN1-202ENST00000381254 PIP4K2AP48426 406 aaPredicted RBP6.68□□□□□ -1.34
GEN1-202ENST00000381254 TPTE2Q6XPS3 522 aa6.68□□□□□ -1.34
GEN1-202ENST00000381254 CNBD1Q8NA66 436 aa6.68□□□□□ -1.34
GEN1-202ENST00000381254 FRMPD1Q5SYB0 1578 aa6.68□□□□□ -1.34
GEN1-202ENST00000381254 POLR3AO14802 1390 aaPredicted RBP6.68□□□□□ -1.34
GEN1-202ENST00000381254 DIAPH3Q9NSV4 1193 aa6.68□□□□□ -1.34
GEN1-202ENST00000381254 DIAPH1O60610 1272 aaKnown RBP6.68□□□□□ -1.34
GEN1-202ENST00000381254 PTCD1O75127 700 aaKnown RBP6.68□□□□□ -1.34
GEN1-202ENST00000381254 NBPF11Q86T75 865 aa6.68□□□□□ -1.34
GEN1-202ENST00000381254 CLUAP1Q96AJ1 413 aa6.68□□□□□ -1.34
GEN1-202ENST00000381254 PKNOX2Q96KN3 472 aa6.68□□□□□ -1.34
GEN1-202ENST00000381254 LMNB1P20700 586 aa6.68□□□□□ -1.34
GEN1-202ENST00000381254 ACBD3Q9H3P7 528 aa6.68□□□□□ -1.34
GEN1-202ENST00000381254 PANK3Q9H999 370 aa6.68□□□□□ -1.34
GEN1-202ENST00000381254 WDR17Q8IZU2 1322 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms