RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 FKBP5Q13451 457 aaPredicted RBP21.47■■□□□ 1.03
PDX1-201ENST00000381033 PAXIP1Q6ZW49 1069 aaPredicted RBP21.47■■□□□ 1.03
PDX1-201ENST00000381033 OTUD7AQ8TE49 926 aaPredicted RBP21.47■■□□□ 1.03
PDX1-201ENST00000381033 LRRC37A3O60309 1634 aa21.47■■□□□ 1.03
PDX1-201ENST00000381033 SMARCA5O60264 1052 aaPredicted RBP21.47■■□□□ 1.03
PDX1-201ENST00000381033 EIF2S2P20042 333 aaKnown RBP21.47■■□□□ 1.03
PDX1-201ENST00000381033 STK31Q9BXU1 1019 aa21.47■■□□□ 1.03
PDX1-201ENST00000381033 PHAXQ9H814 394 aaKnown RBP21.47■■□□□ 1.03
PDX1-201ENST00000381033 BRD2P25440 801 aaKnown RBP21.46■■□□□ 1.03
PDX1-201ENST00000381033 ZNF530Q6P9A1 599 aaPredicted RBP21.46■■□□□ 1.03
PDX1-201ENST00000381033 UPF2Q9HAU5 1272 aaKnown RBP21.46■■□□□ 1.03
PDX1-201ENST00000381033 STRCP1A6NGW2 1772 aa21.46■■□□□ 1.03
PDX1-201ENST00000381033 ANKRD44Q8N8A2 993 aa21.46■■□□□ 1.03
PDX1-201ENST00000381033 DCTPP1Q9H773 170 aa21.45■■□□□ 1.02
PDX1-201ENST00000381033 ANXA1P04083 346 aa21.45■■□□□ 1.02
PDX1-201ENST00000381033 ATF3P18847 181 aa21.45■■□□□ 1.02
PDX1-201ENST00000381033 CCDC30Q5VVM6 783 aa21.44■■□□□ 1.02
PDX1-201ENST00000381033 PXDNQ92626 1479 aa21.44■■□□□ 1.02
PDX1-201ENST00000381033 CEMIPQ8WUJ3 1361 aa21.44■■□□□ 1.02
PDX1-201ENST00000381033 C22orf23Q9BZE7 217 aa21.43■■□□□ 1.02
PDX1-201ENST00000381033 HDGFL1Q5TGJ6 251 aa21.43■■□□□ 1.02
PDX1-201ENST00000381033 RGPD5Q99666 1765 aa21.42■■□□□ 1.02
PDX1-201ENST00000381033 SPRYD3Q8NCJ5 442 aa21.42■■□□□ 1.02
PDX1-201ENST00000381033 TRPM3Q9HCF6 1732 aaPredicted RBP21.42■■□□□ 1.02
PDX1-201ENST00000381033 SLKQ9H2G2 1235 aaPredicted RBP21.42■■□□□ 1.02
PDX1-201ENST00000381033 GSPT1P15170 499 aaKnown RBP21.4■■□□□ 1.02
PDX1-201ENST00000381033 EIF4A1P60842 406 aaKnown RBP21.4■■□□□ 1.02
PDX1-201ENST00000381033 RTL5Q5HYW3 569 aaPredicted RBP21.4■■□□□ 1.02
PDX1-201ENST00000381033 PLEKHM2Q8IWE5 1019 aa21.4■■□□□ 1.02
PDX1-201ENST00000381033 MST1RQ04912 1400 aa21.4■■□□□ 1.02
PDX1-201ENST00000381033 SLIT3O75094 1523 aa21.4■■□□□ 1.02
PDX1-201ENST00000381033 PRAMEF22A3QJZ6 481 aa21.4■■□□□ 1.02
PDX1-201ENST00000381033 CHRNA2Q15822 529 aa21.4■■□□□ 1.02
PDX1-201ENST00000381033 BMP2KLQ5H9B9 411 aa21.4■■□□□ 1.02
PDX1-201ENST00000381033 TBC1D2Q9BYX2 928 aa21.4■■□□□ 1.02
PDX1-201ENST00000381033 RPAP2Q8IXW5 612 aaPredicted RBP21.39■■□□□ 1.02
PDX1-201ENST00000381033 BTBD11A6QL63 1104 aa21.39■■□□□ 1.01
PDX1-201ENST00000381033 TEFQ10587 303 aa21.38■■□□□ 1.01
PDX1-201ENST00000381033 PLEKHO1Q53GL0 409 aaPredicted RBP21.38■■□□□ 1.01
PDX1-201ENST00000381033 AKAP4Q5JQC9 854 aa21.38■■□□□ 1.01
PDX1-201ENST00000381033 NFKBIBQ15653 356 aa21.38■■□□□ 1.01
PDX1-201ENST00000381033 CHPF2Q9P2E5 772 aa21.38■■□□□ 1.01
PDX1-201ENST00000381033 MED1Q15648 1581 aaPredicted RBP21.38■■□□□ 1.01
PDX1-201ENST00000381033 FAM208AQ9UK61 1670 aaKnown RBP21.38■■□□□ 1.01
PDX1-201ENST00000381033 CCT4P50991 539 aaKnown RBP21.37■■□□□ 1.01
PDX1-201ENST00000381033 ERBB3P21860 1342 aa21.37■■□□□ 1.01
PDX1-201ENST00000381033 TBC1D9Q6ZT07 1266 aa21.37■■□□□ 1.01
PDX1-201ENST00000381033 PNMA6EA0A0J9YXQ4 647 aa21.36■■□□□ 1.01
PDX1-201ENST00000381033 RNMTO43148 476 aaKnown RBP21.36■■□□□ 1.01
PDX1-201ENST00000381033 EXOC6BQ9Y2D4 811 aa21.36■■□□□ 1.01
PDX1-201ENST00000381033 NLRP2Q9NX02 1062 aa21.36■■□□□ 1.01
PDX1-201ENST00000381033 PHRF1Q9P1Y6 1649 aaKnown RBP21.35■■□□□ 1.01
PDX1-201ENST00000381033 C1orf141Q5JVX7 400 aa21.35■■□□□ 1.01
PDX1-201ENST00000381033 TSHZ3Q63HK5 1081 aa21.33■■□□□ 1.01
PDX1-201ENST00000381033 USP44Q9H0E7 712 aa21.33■■□□□ 1.01
PDX1-201ENST00000381033 LRRFIP2Q9Y608 721 aaKnown RBP21.33■■□□□ 1.01
PDX1-201ENST00000381033 FRAT2O75474 233 aaPredicted RBP21.33■■□□□ 1
PDX1-201ENST00000381033 GNAI2P04899 355 aa21.33■■□□□ 1
PDX1-201ENST00000381033 BABAM1Q9NWV8 329 aa21.33■■□□□ 1
PDX1-201ENST00000381033 AMOTQ4VCS5 1084 aa21.32■■□□□ 1
PDX1-201ENST00000381033 BECN1Q14457 450 aa21.32■■□□□ 1
PDX1-201ENST00000381033 PROSER3Q2NL68 480 aa21.32■■□□□ 1
PDX1-201ENST00000381033 ALS2Q96Q42 1657 aa21.32■■□□□ 1
PDX1-201ENST00000381033 SAMD1Q6SPF0 538 aaPredicted RBP21.31■■□□□ 1
PDX1-201ENST00000381033 SLC39A6Q13433 755 aa21.31■■□□□ 1
PDX1-201ENST00000381033 PI4KAP2A4QPH2 592 aa21.3■■□□□ 1
PDX1-201ENST00000381033 PI4KAP1Q8N8J0 262 aa21.3■■□□□ 1
PDX1-201ENST00000381033 TTC22Q5TAA0 569 aa21.3■■□□□ 1
PDX1-201ENST00000381033 KIF1AQ12756 1690 aa21.29■■□□□ 1
PDX1-201ENST00000381033 CADPS2Q86UW7 1296 aa21.29■■□□□ 1
PDX1-201ENST00000381033 NCAPD2Q15021 1401 aa21.29■■□□□ 1
PDX1-201ENST00000381033 LMO7Q8WWI1 1683 aa21.29■■□□□ 1
PDX1-201ENST00000381033 CSB-PGBD3P0DP91 1061 aa21.29■■□□□ 1
PDX1-201ENST00000381033 NBPF7P0C2Y1 421 aaPredicted RBP21.28■■□□□ 1
PDX1-201ENST00000381033 RBM42Q9BTD8 480 aaKnown RBP21.28■■□□□ 1
PDX1-201ENST00000381033 KDM3BQ7LBC6 1761 aa21.28■■□□□ 1
PDX1-201ENST00000381033 NAP1L5Q96NT1 182 aaPredicted RBP21.27■■□□□ 1
PDX1-201ENST00000381033 KIF2CQ99661 725 aa21.27■■□□□ 1
PDX1-201ENST00000381033 GIGYF1O75420 1035 aaPredicted RBP21.27■■□□□ 1
PDX1-201ENST00000381033 ANTXR1Q9H6X2 564 aa21.27■■□□□ 1
PDX1-201ENST00000381033 NPHP3Q7Z494 1330 aa21.27■■□□□ 1
PDX1-201ENST00000381033 HMMRO75330 724 aa21.26■□□□□ 0.99
PDX1-201ENST00000381033 SDSP20132 328 aa21.26■□□□□ 0.99
PDX1-201ENST00000381033 RAPGEF4Q8WZA2 1011 aa21.26■□□□□ 0.99
PDX1-201ENST00000381033 GNAI3P08754 354 aa21.26■□□□□ 0.99
PDX1-201ENST00000381033 RBM25P49756 843 aaKnown RBP21.26■□□□□ 0.99
PDX1-201ENST00000381033 CACNA1FO60840 1977 aa21.26■□□□□ 0.99
PDX1-201ENST00000381033 KDM4FA0A1W2PPD8 638 aa21.25■□□□□ 0.99
PDX1-201ENST00000381033 BRINP3Q76B58 766 aa21.25■□□□□ 0.99
PDX1-201ENST00000381033 NFATC2IPQ8NCF5 419 aa21.25■□□□□ 0.99
PDX1-201ENST00000381033 ZNF335Q9H4Z2 1342 aaPredicted RBP21.25■□□□□ 0.99
PDX1-201ENST00000381033 UBTFL1P0CB47 393 aaPredicted RBP21.25■□□□□ 0.99
PDX1-201ENST00000381033 ATP8B2P98198 1209 aa21.25■□□□□ 0.99
PDX1-201ENST00000381033 MEGF6O75095 1541 aa21.24■□□□□ 0.99
PDX1-201ENST00000381033 CDC45O75419 566 aa21.24■□□□□ 0.99
PDX1-201ENST00000381033 CD2BP2O95400 341 aaKnown RBP21.24■□□□□ 0.99
PDX1-201ENST00000381033 SRCIN1Q9C0H9 1055 aa21.24■□□□□ 0.99
PDX1-201ENST00000381033 SOS1Q07889 1333 aaPredicted RBP21.23■□□□□ 0.99
PDX1-201ENST00000381033 SPATA31A3Q5VYP0 1347 aa21.23■□□□□ 0.99
PDX1-201ENST00000381033 BEND3Q5T5X7 828 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms