RNA–Protein interactions for RNA: ENST00000381029.4

VCX3B-201, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-201ENST00000381029 ZNF827Q17R98 1081 aa19.69■□□□□ 0.74
VCX3B-201ENST00000381029 AKT1S1Q96B36 256 aa19.69■□□□□ 0.74
VCX3B-201ENST00000381029 CCNL1Q9UK58 526 aaPredicted RBP19.68■□□□□ 0.74
VCX3B-201ENST00000381029 SIPA1L3O60292 1781 aaPredicted RBP19.67■□□□□ 0.74
VCX3B-201ENST00000381029 PSDA5PKW4 1024 aaPredicted RBP19.67■□□□□ 0.74
VCX3B-201ENST00000381029 SLC15A2Q16348 729 aa19.67■□□□□ 0.74
VCX3B-201ENST00000381029 ZNF831Q5JPB2 1677 aa19.67■□□□□ 0.74
VCX3B-201ENST00000381029 LOC102724428A0A0B4J2F2 783 aa19.66■□□□□ 0.74
VCX3B-201ENST00000381029 HTATSF1O43719 755 aaKnown RBP19.66■□□□□ 0.74
VCX3B-201ENST00000381029 SIK1P57059 783 aa19.66■□□□□ 0.74
VCX3B-201ENST00000381029 NFE2L2Q16236 605 aa19.66■□□□□ 0.74
VCX3B-201ENST00000381029 NBPF14Q5TI25 921 aa19.66■□□□□ 0.74
VCX3B-201ENST00000381029 ITPK1Q13572 414 aa19.65■□□□□ 0.74
VCX3B-201ENST00000381029 PNISRQ8TF01 805 aaKnown RBP19.65■□□□□ 0.74
VCX3B-201ENST00000381029 PNNQ9H307 717 aaKnown RBP19.65■□□□□ 0.74
VCX3B-201ENST00000381029 CICQ96RK0 1608 aaPredicted RBP19.65■□□□□ 0.74
VCX3B-201ENST00000381029 TAF1LQ8IZX4 1826 aa19.65■□□□□ 0.74
VCX3B-201ENST00000381029 KCPQ6ZWJ8 1503 aa19.64■□□□□ 0.73
VCX3B-201ENST00000381029 CASZ1Q86V15 1759 aa19.64■□□□□ 0.73
VCX3B-201ENST00000381029 DLG5Q8TDM6 1919 aa19.63■□□□□ 0.73
VCX3B-201ENST00000381029 C5P01031 1676 aa19.63■□□□□ 0.73
VCX3B-201ENST00000381029 DCTN1Q14203 1278 aa19.63■□□□□ 0.73
VCX3B-201ENST00000381029 WDR43Q15061 677 aaKnown RBP eCLIP19.63■□□□□ 0.73
VCX3B-201ENST00000381029 MCM10Q7L590 875 aa19.63■□□□□ 0.73
VCX3B-201ENST00000381029 PDGFDQ9GZP0 370 aaPredicted RBP19.63■□□□□ 0.73
VCX3B-201ENST00000381029 TMPOP42166 694 aaKnown RBP19.62■□□□□ 0.73
VCX3B-201ENST00000381029 SLC39A6Q13433 755 aa19.62■□□□□ 0.73
VCX3B-201ENST00000381029 CCDC146Q8IYE0 955 aa19.62■□□□□ 0.73
VCX3B-201ENST00000381029 LINC00116Q8NCU8 138 aa19.62■□□□□ 0.73
VCX3B-201ENST00000381029 STK32BQ9NY57 414 aa19.62■□□□□ 0.73
VCX3B-201ENST00000381029 RUNDC1Q96C34 613 aa19.61■□□□□ 0.73
VCX3B-201ENST00000381029 UBR2Q8IWV8 1755 aa19.61■□□□□ 0.73
VCX3B-201ENST00000381029 C4BP0C0L5 1744 aa19.6■□□□□ 0.73
VCX3B-201ENST00000381029 QSER1Q2KHR3 1735 aa19.6■□□□□ 0.73
VCX3B-201ENST00000381029 MAPK8IP3Q9UPT6 1336 aa19.6■□□□□ 0.73
VCX3B-201ENST00000381029 AMIGO3Q86WK7 504 aa19.6■□□□□ 0.73
VCX3B-201ENST00000381029 TUBGCP6Q96RT7 1819 aa19.6■□□□□ 0.73
VCX3B-201ENST00000381029 PNPLA7Q6ZV29 1317 aa19.59■□□□□ 0.73
VCX3B-201ENST00000381029 ATP6V1AP38606 617 aa19.59■□□□□ 0.73
VCX3B-201ENST00000381029 TEFQ10587 303 aa19.59■□□□□ 0.73
VCX3B-201ENST00000381029 MRS2Q9HD23 443 aa19.59■□□□□ 0.73
VCX3B-201ENST00000381029 COL5A3P25940 1745 aaPredicted RBP19.59■□□□□ 0.73
VCX3B-201ENST00000381029 TJP1Q07157 1748 aa19.59■□□□□ 0.73
VCX3B-201ENST00000381029 PTCD1O75127 700 aaKnown RBP19.58■□□□□ 0.72
VCX3B-201ENST00000381029 KCNQ3O43525 872 aa19.57■□□□□ 0.72
VCX3B-201ENST00000381029 NEFMP07197 916 aa19.57■□□□□ 0.72
VCX3B-201ENST00000381029 RIPK4P57078 832 aa19.57■□□□□ 0.72
VCX3B-201ENST00000381029 ZNF790Q6PG37 636 aa19.57■□□□□ 0.72
VCX3B-201ENST00000381029 RTF1Q92541 710 aaKnown RBP19.57■□□□□ 0.72
VCX3B-201ENST00000381029 RBM42Q9BTD8 480 aaKnown RBP19.57■□□□□ 0.72
VCX3B-201ENST00000381029 THUMPD2Q9BTF0 503 aaKnown RBP19.57■□□□□ 0.72
VCX3B-201ENST00000381029 TRIM35Q9UPQ4 493 aa19.57■□□□□ 0.72
VCX3B-201ENST00000381029 UBR3Q6ZT12 1888 aa19.55■□□□□ 0.72
VCX3B-201ENST00000381029 ZNF496Q96IT1 587 aaPredicted RBP19.55■□□□□ 0.72
VCX3B-201ENST00000381029 RRP7AQ9Y3A4 280 aaKnown RBP19.55■□□□□ 0.72
VCX3B-201ENST00000381029 LRP5O75197 1615 aa19.54■□□□□ 0.72
VCX3B-201ENST00000381029 CNTNAP4Q9C0A0 1308 aa19.54■□□□□ 0.72
VCX3B-201ENST00000381029 MYH14Q7Z406 1995 aaKnown RBP19.54■□□□□ 0.72
VCX3B-201ENST00000381029 HMGB2P26583 209 aaKnown RBP19.54■□□□□ 0.72
VCX3B-201ENST00000381029 TAF7Q15545 349 aaPredicted RBP19.54■□□□□ 0.72
VCX3B-201ENST00000381029 RC3H1Q5TC82 1133 aaKnown RBP19.54■□□□□ 0.72
VCX3B-201ENST00000381029 VSIG10Q8N0Z9 540 aa19.54■□□□□ 0.72
VCX3B-201ENST00000381029 BTBD11A6QL63 1104 aa19.53■□□□□ 0.72
VCX3B-201ENST00000381029 APAF1O14727 1248 aa19.53■□□□□ 0.72
VCX3B-201ENST00000381029 TFCP2L1Q9NZI6 479 aa19.53■□□□□ 0.72
VCX3B-201ENST00000381029 HEG1Q9ULI3 1381 aa19.53■□□□□ 0.72
VCX3B-201ENST00000381029 SMIM5Q71RC9 77 aa19.52■□□□□ 0.72
VCX3B-201ENST00000381029 COL23A1Q86Y22 540 aaPredicted RBP19.52■□□□□ 0.72
VCX3B-201ENST00000381029 DNAJC10Q8IXB1 793 aa19.52■□□□□ 0.72
VCX3B-201ENST00000381029 SGIP1Q9BQI5 828 aa19.52■□□□□ 0.72
VCX3B-201ENST00000381029 CYP19A1P11511 503 aaPredicted RBP19.51■□□□□ 0.71
VCX3B-201ENST00000381029 INTS5Q6P9B9 1019 aaKnown RBP19.51■□□□□ 0.71
VCX3B-201ENST00000381029 KDM3BQ7LBC6 1761 aa19.51■□□□□ 0.71
VCX3B-201ENST00000381029 COL24A1Q17RW2 1714 aa19.51■□□□□ 0.71
VCX3B-201ENST00000381029 PTGER2P43116 358 aa19.5■□□□□ 0.71
VCX3B-201ENST00000381029 MIS18AQ9NYP9 233 aa19.5■□□□□ 0.71
VCX3B-201ENST00000381029 SSFA2P28290 1259 aa19.49■□□□□ 0.71
VCX3B-201ENST00000381029 CRKLP46109 303 aaKnown RBP19.49■□□□□ 0.71
VCX3B-201ENST00000381029 LMOD3Q0VAK6 560 aa19.49■□□□□ 0.71
VCX3B-201ENST00000381029 TTC5Q8N0Z6 440 aa19.49■□□□□ 0.71
VCX3B-201ENST00000381029 AK7Q96M32 723 aa19.49■□□□□ 0.71
VCX3B-201ENST00000381029 RPS6KA4O75676 772 aa19.48■□□□□ 0.71
VCX3B-201ENST00000381029 NEUROD2Q15784 382 aa19.48■□□□□ 0.71
VCX3B-201ENST00000381029 SLC16A10Q8TF71 515 aa19.48■□□□□ 0.71
VCX3B-201ENST00000381029 FMNL2Q96PY5 1086 aa19.48■□□□□ 0.71
VCX3B-201ENST00000381029 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.47■□□□□ 0.71
VCX3B-201ENST00000381029 GNPATO15228 680 aa19.47■□□□□ 0.71
VCX3B-201ENST00000381029 ZBTB7AO95365 584 aa19.47■□□□□ 0.71
VCX3B-201ENST00000381029 NCBP3Q53F19 620 aaKnown RBP19.47■□□□□ 0.71
VCX3B-201ENST00000381029 MTFR1LQ9H019 292 aa19.47■□□□□ 0.71
VCX3B-201ENST00000381029 PRAMEF22A3QJZ6 481 aa19.46■□□□□ 0.71
VCX3B-201ENST00000381029 CCER2I3L3R5 266 aa19.46■□□□□ 0.71
VCX3B-201ENST00000381029 EIF4A1P60842 406 aaKnown RBP19.46■□□□□ 0.71
VCX3B-201ENST00000381029 FLAD1Q8NFF5 587 aa19.46■□□□□ 0.71
VCX3B-201ENST00000381029 BABAM1Q9NWV8 329 aa19.46■□□□□ 0.71
VCX3B-201ENST00000381029 CHL1O00533 1208 aa19.45■□□□□ 0.7
VCX3B-201ENST00000381029 DIEXFQ68CQ4 756 aaKnown RBP19.45■□□□□ 0.7
VCX3B-201ENST00000381029 CCDC87Q9NVE4 849 aa19.45■□□□□ 0.7
VCX3B-201ENST00000381029 ZNF853P0CG23 659 aa19.44■□□□□ 0.7
VCX3B-201ENST00000381029 ADRA2BP18089 450 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms