RNA–Protein interactions for RNA: ENST00000380962.9

LCMT1-201, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 2

Gene LCMT1, Length 1,529 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-201ENST00000380962 TBC1D2Q9BYX2 928 aa16.6■□□□□ 0.25
LCMT1-201ENST00000380962 CDC45O75419 566 aa16.59■□□□□ 0.25
LCMT1-201ENST00000380962 GNAI2P04899 355 aa16.59■□□□□ 0.25
LCMT1-201ENST00000380962 G2E3Q7L622 706 aa16.59■□□□□ 0.25
LCMT1-201ENST00000380962 PLEKHM2Q8IWE5 1019 aa16.59■□□□□ 0.25
LCMT1-201ENST00000380962 SNX21Q969T3 373 aa16.59■□□□□ 0.25
LCMT1-201ENST00000380962 ORAI2Q96SN7 254 aa16.59■□□□□ 0.25
LCMT1-201ENST00000380962 ALS2Q96Q42 1657 aa16.58■□□□□ 0.25
LCMT1-201ENST00000380962 TTC22Q5TAA0 569 aa16.57■□□□□ 0.24
LCMT1-201ENST00000380962 KRT28Q7Z3Y7 464 aa16.57■□□□□ 0.24
LCMT1-201ENST00000380962 ANTXR1Q9H6X2 564 aa16.57■□□□□ 0.24
LCMT1-201ENST00000380962 FKBP5Q13451 457 aaPredicted RBP16.56■□□□□ 0.24
LCMT1-201ENST00000380962 ADAMTS7Q9UKP4 1686 aa16.56■□□□□ 0.24
LCMT1-201ENST00000380962 EIF4A1P60842 406 aaKnown RBP16.55■□□□□ 0.24
LCMT1-201ENST00000380962 HDGFL1Q5TGJ6 251 aa16.55■□□□□ 0.24
LCMT1-201ENST00000380962 TBC1D9Q6ZT07 1266 aa16.55■□□□□ 0.24
LCMT1-201ENST00000380962 ILDR2Q71H61 639 aa16.55■□□□□ 0.24
LCMT1-201ENST00000380962 USHBP1Q8N6Y0 703 aa16.55■□□□□ 0.24
LCMT1-201ENST00000380962 RBM33Q96EV2 1170 aaKnown RBP16.55■□□□□ 0.24
LCMT1-201ENST00000380962 OSBPL3Q9H4L5 887 aa16.55■□□□□ 0.24
LCMT1-201ENST00000380962 ZNF530Q6P9A1 599 aaPredicted RBP16.55■□□□□ 0.24
LCMT1-201ENST00000380962 HSCBQ8IWL3 235 aa16.55■□□□□ 0.24
LCMT1-201ENST00000380962 ANKRD24Q8TF21 1146 aa16.55■□□□□ 0.24
LCMT1-201ENST00000380962 SLC4A10Q6U841 1118 aa16.54■□□□□ 0.24
LCMT1-201ENST00000380962 F6X3S4 739 aa16.53■□□□□ 0.24
LCMT1-201ENST00000380962 GSPT1P15170 499 aaKnown RBP16.53■□□□□ 0.24
LCMT1-201ENST00000380962 ATP8B2P98198 1209 aa16.53■□□□□ 0.24
LCMT1-201ENST00000380962 TEFQ10587 303 aa16.53■□□□□ 0.24
LCMT1-201ENST00000380962 C1orf141Q5JVX7 400 aa16.53■□□□□ 0.24
LCMT1-201ENST00000380962 RGPD2P0DJD1 1756 aa16.53■□□□□ 0.24
LCMT1-201ENST00000380962 RNMTO43148 476 aaKnown RBP16.52■□□□□ 0.24
LCMT1-201ENST00000380962 ATF3P18847 181 aa16.52■□□□□ 0.24
LCMT1-201ENST00000380962 HEG1Q9ULI3 1381 aa16.51■□□□□ 0.23
LCMT1-201ENST00000380962 CASC1Q6TDU7 716 aa16.51■□□□□ 0.23
LCMT1-201ENST00000380962 TMEM94Q12767 1356 aa16.51■□□□□ 0.23
LCMT1-201ENST00000380962 LRRC59Q96AG4 307 aaKnown RBP16.5■□□□□ 0.23
LCMT1-201ENST00000380962 ERBB3P21860 1342 aa16.5■□□□□ 0.23
LCMT1-201ENST00000380962 IBTKQ9P2D0 1353 aaPredicted RBP16.5■□□□□ 0.23
LCMT1-201ENST00000380962 BTBD11A6QL63 1104 aa16.5■□□□□ 0.23
LCMT1-201ENST00000380962 CADPS2Q86UW7 1296 aa16.5■□□□□ 0.23
LCMT1-201ENST00000380962 LGR6Q9HBX8 967 aa16.5■□□□□ 0.23
LCMT1-201ENST00000380962 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.5■□□□□ 0.232e-7■■□□□ 13.3
LCMT1-201ENST00000380962 CHMP5Q9NZZ3 219 aa16.5■□□□□ 0.23
LCMT1-201ENST00000380962 AOX1Q06278 1338 aa16.49■□□□□ 0.23
LCMT1-201ENST00000380962 NPHP3Q7Z494 1330 aa16.49■□□□□ 0.23
LCMT1-201ENST00000380962 SIPA1L3O60292 1781 aaPredicted RBP16.49■□□□□ 0.23
LCMT1-201ENST00000380962 PXDNQ92626 1479 aa16.48■□□□□ 0.23
LCMT1-201ENST00000380962 UBTFL1P0CB47 393 aaPredicted RBP16.48■□□□□ 0.23
LCMT1-201ENST00000380962 SRCIN1Q9C0H9 1055 aa16.48■□□□□ 0.23
LCMT1-201ENST00000380962 CIZ1Q9ULV3 898 aaPredicted RBP16.48■□□□□ 0.23
LCMT1-201ENST00000380962 HDAC5Q9UQL6 1122 aa16.48■□□□□ 0.23
LCMT1-201ENST00000380962 SALL3Q9BXA9 1300 aa16.48■□□□□ 0.23
LCMT1-201ENST00000380962 TNS3Q68CZ2 1445 aa16.47■□□□□ 0.23
LCMT1-201ENST00000380962 FRAT2O75474 233 aaPredicted RBP16.47■□□□□ 0.23
LCMT1-201ENST00000380962 KIF2CQ99661 725 aa16.47■□□□□ 0.23
LCMT1-201ENST00000380962 LRRCC1Q9C099 1032 aa16.47■□□□□ 0.23
LCMT1-201ENST00000380962 USP44Q9H0E7 712 aa16.47■□□□□ 0.23
LCMT1-201ENST00000380962 SLKQ9H2G2 1235 aaPredicted RBP16.47■□□□□ 0.23
LCMT1-201ENST00000380962 DBF4Q9UBU7 674 aaPredicted RBP16.47■□□□□ 0.23
LCMT1-201ENST00000380962 ZBTB7CA1YPR0 619 aa16.46■□□□□ 0.23
LCMT1-201ENST00000380962 RAB11FIP3O75154 756 aa16.46■□□□□ 0.23
LCMT1-201ENST00000380962 XPCQ01831 940 aaPredicted RBP16.46■□□□□ 0.23
LCMT1-201ENST00000380962 SSH3Q8TE77 659 aa16.46■□□□□ 0.23
LCMT1-201ENST00000380962 STRCP1A6NGW2 1772 aa16.46■□□□□ 0.22
LCMT1-201ENST00000380962 COL18A1P39060 1754 aa16.46■□□□□ 0.22
LCMT1-201ENST00000380962 SDSP20132 328 aa16.45■□□□□ 0.22
LCMT1-201ENST00000380962 PDE1AP54750 535 aa16.45■□□□□ 0.22
LCMT1-201ENST00000380962 GSE1Q14687 1217 aa16.45■□□□□ 0.22
LCMT1-201ENST00000380962 LMOD2Q6P5Q4 547 aa16.45■□□□□ 0.22
LCMT1-201ENST00000380962 DNAAF4Q8WXU2 420 aa16.45■□□□□ 0.22
LCMT1-201ENST00000380962 STAP2Q9UGK3 403 aa16.45■□□□□ 0.22
LCMT1-201ENST00000380962 AXIN2Q9Y2T1 843 aa16.45■□□□□ 0.22
LCMT1-201ENST00000380962 CPDO75976 1380 aa16.45■□□□□ 0.22
LCMT1-201ENST00000380962 REC8O95072 547 aa16.45■□□□□ 0.22
LCMT1-201ENST00000380962 POLA2Q14181 598 aa16.45■□□□□ 0.22
LCMT1-201ENST00000380962 RABEP1Q15276 862 aa16.45■□□□□ 0.22
LCMT1-201ENST00000380962 C16orf71Q8IYS4 520 aaPredicted RBP16.45■□□□□ 0.22
LCMT1-201ENST00000380962 STRCQ7RTU9 1775 aa16.44■□□□□ 0.22
LCMT1-201ENST00000380962 GIGYF1O75420 1035 aaPredicted RBP16.44■□□□□ 0.22
LCMT1-201ENST00000380962 ALDH1L1O75891 902 aa16.44■□□□□ 0.22
LCMT1-201ENST00000380962 DDIT3P35638 169 aa16.44■□□□□ 0.22
LCMT1-201ENST00000380962 BEND3Q5T5X7 828 aa16.44■□□□□ 0.22
LCMT1-201ENST00000380962 MPRIPQ6WCQ1 1025 aa16.44■□□□□ 0.22
LCMT1-201ENST00000380962 IL27Q8NEV9 243 aa16.44■□□□□ 0.22
LCMT1-201ENST00000380962 RAPGEF4Q8WZA2 1011 aa16.44■□□□□ 0.22
LCMT1-201ENST00000380962 NECTIN2Q92692 538 aa16.44■□□□□ 0.22
LCMT1-201ENST00000380962 PHAXQ9H814 394 aaKnown RBP16.44■□□□□ 0.22
LCMT1-201ENST00000380962 CHPF2Q9P2E5 772 aa16.44■□□□□ 0.22
LCMT1-201ENST00000380962 LRRFIP2Q9Y608 721 aaKnown RBP16.44■□□□□ 0.22
LCMT1-201ENST00000380962 CRYBG1Q9Y4K1 1723 aa16.43■□□□□ 0.22
LCMT1-201ENST00000380962 EPB41L2O43491 1005 aaKnown RBP16.43■□□□□ 0.22
LCMT1-201ENST00000380962 SMARCA5O60264 1052 aaPredicted RBP16.43■□□□□ 0.22
LCMT1-201ENST00000380962 HSP90AB4PQ58FF6 505 aa16.43■□□□□ 0.22
LCMT1-201ENST00000380962 OTUD7AQ8TE49 926 aaPredicted RBP16.43■□□□□ 0.22
LCMT1-201ENST00000380962 USP26Q9BXU7 913 aa16.43■□□□□ 0.22
LCMT1-201ENST00000380962 SPG7Q9UQ90 795 aa16.43■□□□□ 0.22
LCMT1-201ENST00000380962 MRC1P22897 1456 aa16.43■□□□□ 0.22
LCMT1-201ENST00000380962 PNMA6EA0A0J9YXQ4 647 aa16.42■□□□□ 0.22
LCMT1-201ENST00000380962 TATP17735 454 aaPredicted RBP16.42■□□□□ 0.22
LCMT1-201ENST00000380962 HYPKQ9NX55 129 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms