RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 GSE1Q14687 1217 aa12.46□□□□□ -0.41
HMGN1-202ENST00000380747 ACSBG1Q96GR2 724 aa12.46□□□□□ -0.41
HMGN1-202ENST00000380747 ARXQ96QS3 562 aa12.46□□□□□ -0.41
HMGN1-202ENST00000380747 PAPPAQ13219 1627 aa12.46□□□□□ -0.41
HMGN1-202ENST00000380747 NHSQ6T4R5 1651 aa12.45□□□□□ -0.42
HMGN1-202ENST00000380747 SENP3-EIF4A1A0A087X0R7 540 aa12.45□□□□□ -0.42
HMGN1-202ENST00000380747 IL13P35225 146 aa12.45□□□□□ -0.42
HMGN1-202ENST00000380747 NCAPD2Q15021 1401 aa12.45□□□□□ -0.42
HMGN1-202ENST00000380747 IGSF1Q8N6C5 1336 aa12.44□□□□□ -0.42
HMGN1-202ENST00000380747 DIAPH1O60610 1272 aaKnown RBP12.44□□□□□ -0.42
HMGN1-202ENST00000380747 DCAF8Q5TAQ9 597 aa12.44□□□□□ -0.42
HMGN1-202ENST00000380747 PCDH11XQ9BZA7 1347 aa12.43□□□□□ -0.42
HMGN1-202ENST00000380747 PCDH11YQ9BZA8 1340 aa12.43□□□□□ -0.42
HMGN1-202ENST00000380747 PPP2R1AP30153 589 aa12.43□□□□□ -0.42
HMGN1-202ENST00000380747 SULT6B1Q6IMI4 303 aa12.43□□□□□ -0.42
HMGN1-202ENST00000380747 AEBP1Q8IUX7 1158 aa12.43□□□□□ -0.42
HMGN1-202ENST00000380747 SLC16A10Q8TF71 515 aa12.43□□□□□ -0.42
HMGN1-202ENST00000380747 CFAP53Q96M91 514 aa12.43□□□□□ -0.42
HMGN1-202ENST00000380747 SPG7Q9UQ90 795 aa12.43□□□□□ -0.42
HMGN1-202ENST00000380747 PLCB2Q00722 1185 aa12.42□□□□□ -0.42
HMGN1-202ENST00000380747 ZNF316A6NFI3 1004 aaPredicted RBP12.41□□□□□ -0.42
HMGN1-202ENST00000380747 U2SURPO15042 1029 aaKnown RBP12.41□□□□□ -0.42
HMGN1-202ENST00000380747 CHADLQ6NUI6 762 aa12.41□□□□□ -0.42
HMGN1-202ENST00000380747 SYTL4Q96C24 671 aaPredicted RBP12.41□□□□□ -0.42
HMGN1-202ENST00000380747 CYP27B1O15528 508 aa12.4□□□□□ -0.42
HMGN1-202ENST00000380747 HMOX1P09601 288 aa12.4□□□□□ -0.42
HMGN1-202ENST00000380747 PRIM1P49642 420 aaKnown RBP12.4□□□□□ -0.42
HMGN1-202ENST00000380747 ZNF827Q17R98 1081 aa12.4□□□□□ -0.42
HMGN1-202ENST00000380747 FAM212AQ96EL1 285 aa12.4□□□□□ -0.42
HMGN1-202ENST00000380747 SHANK3Q9BYB0 1731 aa12.4□□□□□ -0.43
HMGN1-202ENST00000380747 PLEKHO1Q53GL0 409 aaPredicted RBP12.39□□□□□ -0.43
HMGN1-202ENST00000380747 SLC27A3Q5K4L6 730 aa12.39□□□□□ -0.43
HMGN1-202ENST00000380747 IFFO2Q5TF58 517 aa12.39□□□□□ -0.43
HMGN1-202ENST00000380747 RASEFQ8IZ41 740 aa12.39□□□□□ -0.43
HMGN1-202ENST00000380747 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.39□□□□□ -0.438e-8■■□□□ 13
HMGN1-202ENST00000380747 COL24A1Q17RW2 1714 aa12.39□□□□□ -0.43
HMGN1-202ENST00000380747 COL3A1P02461 1466 aaPredicted RBP12.39□□□□□ -0.43
HMGN1-202ENST00000380747 QSER1Q2KHR3 1735 aa12.38□□□□□ -0.43
HMGN1-202ENST00000380747 PKD1L3Q7Z443 1732 aa12.38□□□□□ -0.43
HMGN1-202ENST00000380747 GIGYF1O75420 1035 aaPredicted RBP12.38□□□□□ -0.43
HMGN1-202ENST00000380747 PHKG2P15735 406 aa12.38□□□□□ -0.43
HMGN1-202ENST00000380747 GPR162Q16538 588 aa12.38□□□□□ -0.43
HMGN1-202ENST00000380747 AMOTQ4VCS5 1084 aa12.38□□□□□ -0.43
HMGN1-202ENST00000380747 IFNL2Q8IZJ0 200 aa12.38□□□□□ -0.43
HMGN1-202ENST00000380747 LRRC4BQ9NT99 713 aa12.38□□□□□ -0.43
HMGN1-202ENST00000380747 NUDCQ9Y266 331 aa12.38□□□□□ -0.43
HMGN1-202ENST00000380747 BTAF1O14981 1849 aa12.37□□□□□ -0.43
HMGN1-202ENST00000380747 POLD1P28340 1107 aa12.37□□□□□ -0.43
HMGN1-202ENST00000380747 RALBP1Q15311 655 aa12.37□□□□□ -0.43
HMGN1-202ENST00000380747 ZNF530Q6P9A1 599 aaPredicted RBP12.37□□□□□ -0.43
HMGN1-202ENST00000380747 KDRP35968 1356 aa12.37□□□□□ -0.43
HMGN1-202ENST00000380747 DOT1LQ8TEK3 1739 aa12.37□□□□□ -0.43
HMGN1-202ENST00000380747 PLEKHG2Q9H7P9 1386 aa12.36□□□□□ -0.43
HMGN1-202ENST00000380747 U2AF1L5P0DN76 240 aaPredicted RBP12.35□□□□□ -0.43
HMGN1-202ENST00000380747 U2AF1Q01081 240 aaKnown RBP eCLIP12.35□□□□□ -0.434e-7■■■■■ 29.1
HMGN1-202ENST00000380747 NKX1-1Q15270 411 aaPredicted RBP12.35□□□□□ -0.43
HMGN1-202ENST00000380747 C1orf141Q5JVX7 400 aa12.35□□□□□ -0.43
HMGN1-202ENST00000380747 MPRIPQ6WCQ1 1025 aa12.35□□□□□ -0.43
HMGN1-202ENST00000380747 PNPLA7Q6ZV29 1317 aa12.35□□□□□ -0.43
HMGN1-202ENST00000380747 HSP90AB1P08238 724 aaKnown RBP12.34□□□□□ -0.43
HMGN1-202ENST00000380747 MYBBP1AQ9BQG0 1328 aaKnown RBP12.34□□□□□ -0.43
HMGN1-202ENST00000380747 GRIN3BO60391 1043 aa12.33□□□□□ -0.44
HMGN1-202ENST00000380747 BBXQ8WY36 941 aaPredicted RBP12.33□□□□□ -0.44
HMGN1-202ENST00000380747 RNF25Q96BH1 459 aaPredicted RBP12.33□□□□□ -0.44
HMGN1-202ENST00000380747 PRKAR2BP31323 418 aa12.32□□□□□ -0.44
HMGN1-202ENST00000380747 MTHFSDQ2M296 383 aaKnown RBP12.32□□□□□ -0.44
HMGN1-202ENST00000380747 TMOD3Q9NYL9 352 aa12.32□□□□□ -0.44
HMGN1-202ENST00000380747 PRKAR2AP13861 404 aaKnown RBP12.31□□□□□ -0.44
HMGN1-202ENST00000380747 AKAP4Q5JQC9 854 aa12.31□□□□□ -0.44
HMGN1-202ENST00000380747 PIGBQ92521 554 aa12.31□□□□□ -0.44
HMGN1-202ENST00000380747 DCAF5Q96JK2 942 aa12.31□□□□□ -0.44
HMGN1-202ENST00000380747 RSPH6AQ9H0K4 717 aa12.31□□□□□ -0.44
HMGN1-202ENST00000380747 PRKRIP1Q9H875 184 aaPredicted RBP12.31□□□□□ -0.44
HMGN1-202ENST00000380747 TFCP2L1Q9NZI6 479 aa12.31□□□□□ -0.44
HMGN1-202ENST00000380747 FARP1Q9Y4F1 1045 aaPredicted RBP12.31□□□□□ -0.44
HMGN1-202ENST00000380747 TOGARAM1Q9Y4F4 1720 aa12.31□□□□□ -0.44
HMGN1-202ENST00000380747 KAT6BQ8WYB5 2073 aa12.3□□□□□ -0.44
HMGN1-202ENST00000380747 FXR2P51116 673 aaKnown RBP eCLIP12.3□□□□□ -0.44
HMGN1-202ENST00000380747 CABP4P57796 275 aa12.3□□□□□ -0.44
HMGN1-202ENST00000380747 NLGN2Q8NFZ4 835 aa12.3□□□□□ -0.44
HMGN1-202ENST00000380747 PALLDQ8WX93 1383 aa12.3□□□□□ -0.44
HMGN1-202ENST00000380747 KDM6AO15550 1401 aaPredicted RBP12.29□□□□□ -0.44
HMGN1-202ENST00000380747 ERVV-2B6SEH9 535 aa12.29□□□□□ -0.44
HMGN1-202ENST00000380747 YBX3P16989 372 aaKnown RBP eCLIP12.29□□□□□ -0.44
HMGN1-202ENST00000380747 KCNQ4P56696 695 aa12.29□□□□□ -0.44
HMGN1-202ENST00000380747 GAS2L2Q8NHY3 880 aa12.29□□□□□ -0.44
HMGN1-202ENST00000380747 SMARCC1Q92922 1105 aaPredicted RBP12.29□□□□□ -0.44
HMGN1-202ENST00000380747 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.29□□□□□ -0.44
HMGN1-202ENST00000380747 CCNL1Q9UK58 526 aaPredicted RBP12.29□□□□□ -0.44
HMGN1-202ENST00000380747 LY75O60449 1722 aa12.28□□□□□ -0.44
HMGN1-202ENST00000380747 FCHSD2O94868 740 aa12.28□□□□□ -0.44
HMGN1-202ENST00000380747 HMGB2P26583 209 aaKnown RBP12.28□□□□□ -0.44
HMGN1-202ENST00000380747 PELP1Q8IZL8 1130 aaKnown RBP12.28□□□□□ -0.44
HMGN1-202ENST00000380747 PHACTR3Q96KR7 559 aa12.28□□□□□ -0.44
HMGN1-202ENST00000380747 TUBGCP6Q96RT7 1819 aa12.27□□□□□ -0.44
HMGN1-202ENST00000380747 RNMTO43148 476 aaKnown RBP12.27□□□□□ -0.45
HMGN1-202ENST00000380747 NEFMP07197 916 aa12.27□□□□□ -0.45
HMGN1-202ENST00000380747 CHRDL2Q6WN34 429 aa12.27□□□□□ -0.45
HMGN1-202ENST00000380747 ASAP1Q9ULH1 1129 aa12.27□□□□□ -0.45
HMGN1-202ENST00000380747 ATP10DQ9P241 1426 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms