RNA–Protein interactions for RNA: ENST00000380743.8

SMN2-203, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-203ENST00000380743 ITGB4P16144 1822 aa16.63■□□□□ 0.25
SMN2-203ENST00000380743 MRC1P22897 1456 aa16.62■□□□□ 0.25
SMN2-203ENST00000380743 TEFQ10587 303 aa16.62■□□□□ 0.25
SMN2-203ENST00000380743 CCDC27Q2M243 656 aa16.62■□□□□ 0.25
SMN2-203ENST00000380743 NCBP3Q53F19 620 aaKnown RBP16.62■□□□□ 0.25
SMN2-203ENST00000380743 WWC1Q8IX03 1113 aa16.62■□□□□ 0.25
SMN2-203ENST00000380743 UPF1Q92900 1129 aaKnown RBP eCLIP16.6■□□□□ 0.25
SMN2-203ENST00000380743 ASAP1Q9ULH1 1129 aa16.6■□□□□ 0.25
SMN2-203ENST00000380743 BTAF1O14981 1849 aa16.59■□□□□ 0.25
SMN2-203ENST00000380743 APBA3O96018 575 aa16.59■□□□□ 0.25
SMN2-203ENST00000380743 TAF7Q15545 349 aaPredicted RBP16.59■□□□□ 0.25
SMN2-203ENST00000380743 NGEFQ8N5V2 710 aa16.59■□□□□ 0.25
SMN2-203ENST00000380743 MIS18AQ9NYP9 233 aa16.59■□□□□ 0.25
SMN2-203ENST00000380743 SIPA1L3O60292 1781 aaPredicted RBP16.59■□□□□ 0.25
SMN2-203ENST00000380743 TNS1Q9HBL0 1735 aaKnown RBP16.59■□□□□ 0.25
SMN2-203ENST00000380743 BTBD11A6QL63 1104 aa16.58■□□□□ 0.24
SMN2-203ENST00000380743 SLC39A6Q13433 755 aa16.58■□□□□ 0.24
SMN2-203ENST00000380743 CCDC125Q86Z20 511 aa16.58■□□□□ 0.24
SMN2-203ENST00000380743 ATG3Q9NT62 314 aa16.58■□□□□ 0.24
SMN2-203ENST00000380743 HNRNPUQ00839 825 aaKnown RBP eCLIP16.57■□□□□ 0.24
SMN2-203ENST00000380743 ZNF521Q96K83 1311 aa16.57■□□□□ 0.24
SMN2-203ENST00000380743 SF3B2Q13435 895 aaKnown RBP16.56■□□□□ 0.24
SMN2-203ENST00000380743 KCNQ3O43525 872 aa16.55■□□□□ 0.24
SMN2-203ENST00000380743 LAS1LQ9Y4W2 734 aaKnown RBP16.55■□□□□ 0.24
SMN2-203ENST00000380743 CHL1O00533 1208 aa16.55■□□□□ 0.24
SMN2-203ENST00000380743 PLSCR1O15162 318 aa16.55■□□□□ 0.24
SMN2-203ENST00000380743 CALD1Q05682 793 aaKnown RBP16.55■□□□□ 0.24
SMN2-203ENST00000380743 ZNF790Q6PG37 636 aa16.55■□□□□ 0.24
SMN2-203ENST00000380743 DEFB132Q7Z7B7 95 aa16.55■□□□□ 0.24
SMN2-203ENST00000380743 WDR63Q8IWG1 891 aa16.55■□□□□ 0.24
SMN2-203ENST00000380743 PALLDQ8WX93 1383 aa16.54■□□□□ 0.24
SMN2-203ENST00000380743 ZNF853P0CG23 659 aa16.54■□□□□ 0.24
SMN2-203ENST00000380743 EN1Q05925 392 aaPredicted RBP16.54■□□□□ 0.24
SMN2-203ENST00000380743 SMARCC1Q92922 1105 aaPredicted RBP16.54■□□□□ 0.24
SMN2-203ENST00000380743 CFAP44Q96MT7 982 aa16.54■□□□□ 0.24
SMN2-203ENST00000380743 PAPPAQ13219 1627 aa16.53■□□□□ 0.24
SMN2-203ENST00000380743 PTCD1O75127 700 aaKnown RBP16.53■□□□□ 0.24
SMN2-203ENST00000380743 PROM2Q8N271 834 aa16.53■□□□□ 0.24
SMN2-203ENST00000380743 CAMKK2Q96RR4 588 aa16.53■□□□□ 0.24
SMN2-203ENST00000380743 SPINK5Q9NQ38 1064 aaPredicted RBP16.53■□□□□ 0.24
SMN2-203ENST00000380743 IFT57Q9NWB7 429 aa16.53■□□□□ 0.24
SMN2-203ENST00000380743 TSPYL4Q9UJ04 414 aa16.53■□□□□ 0.24
SMN2-203ENST00000380743 BAG6P46379 1132 aa16.52■□□□□ 0.24
SMN2-203ENST00000380743 GNAI1P63096 354 aa16.52■□□□□ 0.24
SMN2-203ENST00000380743 TTC5Q8N0Z6 440 aa16.52■□□□□ 0.24
SMN2-203ENST00000380743 BABAM1Q9NWV8 329 aa16.52■□□□□ 0.24
SMN2-203ENST00000380743 IL16Q14005 1332 aa16.52■□□□□ 0.23
SMN2-203ENST00000380743 KCNQ4P56696 695 aa16.51■□□□□ 0.23
SMN2-203ENST00000380743 EZH2Q15910 746 aaKnown RBP16.51■□□□□ 0.23
SMN2-203ENST00000380743 ZNF496Q96IT1 587 aaPredicted RBP16.51■□□□□ 0.23
SMN2-203ENST00000380743 SLC4A9Q96Q91 983 aa16.51■□□□□ 0.23
SMN2-203ENST00000380743 RBM42Q9BTD8 480 aaKnown RBP16.51■□□□□ 0.23
SMN2-203ENST00000380743 MBIPQ9NS73 344 aa16.51■□□□□ 0.23
SMN2-203ENST00000380743 KCPQ6ZWJ8 1503 aa16.51■□□□□ 0.23
SMN2-203ENST00000380743 LOC102724428A0A0B4J2F2 783 aa16.5■□□□□ 0.23
SMN2-203ENST00000380743 SIK1P57059 783 aa16.5■□□□□ 0.23
SMN2-203ENST00000380743 KDM3BQ7LBC6 1761 aa16.5■□□□□ 0.23
SMN2-203ENST00000380743 TXNRD1Q16881 649 aa16.5■□□□□ 0.23
SMN2-203ENST00000380743 TSR2Q969E8 191 aaKnown RBP16.5■□□□□ 0.23
SMN2-203ENST00000380743 LRRC4BQ9NT99 713 aa16.5■□□□□ 0.23
SMN2-203ENST00000380743 LY75O60449 1722 aa16.49■□□□□ 0.23
SMN2-203ENST00000380743 UBR2Q8IWV8 1755 aa16.49■□□□□ 0.23
SMN2-203ENST00000380743 EIF4A1P60842 406 aaKnown RBP16.49■□□□□ 0.23
SMN2-203ENST00000380743 GOLGA2Q08379 1002 aa16.49■□□□□ 0.23
SMN2-203ENST00000380743 CDCA7LQ96GN5 454 aa16.49■□□□□ 0.23
SMN2-203ENST00000380743 FMNL2Q96PY5 1086 aa16.49■□□□□ 0.23
SMN2-203ENST00000380743 CCNL1Q9UK58 526 aaPredicted RBP16.49■□□□□ 0.23
SMN2-203ENST00000380743 RGPD3A6NKT7 1758 aaPredicted RBP16.48■□□□□ 0.23
SMN2-203ENST00000380743 RGPD4Q7Z3J3 1758 aa16.48■□□□□ 0.23
SMN2-203ENST00000380743 ATP6V1AP38606 617 aa16.48■□□□□ 0.23
SMN2-203ENST00000380743 YTHDC1Q96MU7 727 aaKnown RBP16.48■□□□□ 0.23
SMN2-203ENST00000380743 ZBED9Q6R2W3 1325 aa16.48■□□□□ 0.23
SMN2-203ENST00000380743 SOCS7O14512 581 aa16.47■□□□□ 0.23
SMN2-203ENST00000380743 ITPK1Q13572 414 aa16.47■□□□□ 0.23
SMN2-203ENST00000380743 SLC27A3Q5K4L6 730 aa16.47■□□□□ 0.23
SMN2-203ENST00000380743 HEG1Q9ULI3 1381 aa16.47■□□□□ 0.23
SMN2-203ENST00000380743 PRAMEF22A3QJZ6 481 aa16.46■□□□□ 0.23
SMN2-203ENST00000380743 KRT24Q2M2I5 525 aa16.46■□□□□ 0.23
SMN2-203ENST00000380743 VSIG10Q8N0Z9 540 aa16.46■□□□□ 0.23
SMN2-203ENST00000380743 FANCIQ9NVI1 1328 aa16.46■□□□□ 0.23
SMN2-203ENST00000380743 SLFN5Q08AF3 891 aa16.45■□□□□ 0.22
SMN2-203ENST00000380743 MYH16Q9H6N6 1097 aa16.45■□□□□ 0.22
SMN2-203ENST00000380743 E9PSI1 815 aa16.45■□□□□ 0.22
SMN2-203ENST00000380743 GIGYF1O75420 1035 aaPredicted RBP16.45■□□□□ 0.22
SMN2-203ENST00000380743 DNAJC10Q8IXB1 793 aa16.45■□□□□ 0.22
SMN2-203ENST00000380743 SNRPA1P09661 255 aaKnown RBP16.44■□□□□ 0.22
SMN2-203ENST00000380743 LINC00116Q8NCU8 138 aa16.44■□□□□ 0.22
SMN2-203ENST00000380743 ZNF831Q5JPB2 1677 aa16.43■□□□□ 0.22
SMN2-203ENST00000380743 TRMT2AQ8IZ69 625 aaKnown RBP16.43■□□□□ 0.22
SMN2-203ENST00000380743 C8orf58Q8NAV2 365 aa16.43■□□□□ 0.22
SMN2-203ENST00000380743 USP16Q9Y5T5 823 aa16.43■□□□□ 0.22
SMN2-203ENST00000380743 RREB1Q92766 1687 aa16.43■□□□□ 0.22
SMN2-203ENST00000380743 TJP1Q07157 1748 aa16.43■□□□□ 0.22
SMN2-203ENST00000380743 ELL2O00472 640 aaPredicted RBP16.41■□□□□ 0.22
SMN2-203ENST00000380743 CYP19A1P11511 503 aaPredicted RBP16.41■□□□□ 0.22
SMN2-203ENST00000380743 DUSP27Q5VZP5 1158 aa16.41■□□□□ 0.22
SMN2-203ENST00000380743 TSPYL6Q8N831 410 aa16.41■□□□□ 0.22
SMN2-203ENST00000380743 CICQ96RK0 1608 aaPredicted RBP16.41■□□□□ 0.22
SMN2-203ENST00000380743 EXOSC9Q06265 439 aaKnown RBP16.4■□□□□ 0.22
SMN2-203ENST00000380743 TEX13AQ9BXU3 409 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms