RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 GNAI3P08754 354 aa15.7■□□□□ 0.1
VPS16-202ENST00000380445 HSPA2P54652 639 aa15.7■□□□□ 0.1
VPS16-202ENST00000380445 NCAPD2Q15021 1401 aa15.69■□□□□ 0.1
VPS16-202ENST00000380445 NFKBIBQ15653 356 aa15.69■□□□□ 0.1
VPS16-202ENST00000380445 DCCP43146 1447 aa15.69■□□□□ 0.1
VPS16-202ENST00000380445 F6X3S4 739 aa15.69■□□□□ 0.1
VPS16-202ENST00000380445 PLEKHG5O94827 1062 aa15.69■□□□□ 0.1
VPS16-202ENST00000380445 ZNF530Q6P9A1 599 aaPredicted RBP15.69■□□□□ 0.1
VPS16-202ENST00000380445 GNAI2P04899 355 aa15.68■□□□□ 0.1
VPS16-202ENST00000380445 TEFQ10587 303 aa15.68■□□□□ 0.1
VPS16-202ENST00000380445 C1orf141Q5JVX7 400 aa15.68■□□□□ 0.1
VPS16-202ENST00000380445 HDGFL1Q5TGJ6 251 aa15.68■□□□□ 0.1
VPS16-202ENST00000380445 ANKRD24Q8TF21 1146 aa15.68■□□□□ 0.1
VPS16-202ENST00000380445 MED1Q15648 1581 aaPredicted RBP15.68■□□□□ 0.1
VPS16-202ENST00000380445 LRRC59Q96AG4 307 aaKnown RBP15.68■□□□□ 0.1
VPS16-202ENST00000380445 RBM25P49756 843 aaKnown RBP15.67■□□□□ 0.1
VPS16-202ENST00000380445 PXDNLA1KZ92 1463 aa15.67■□□□□ 0.1
VPS16-202ENST00000380445 LMO7Q8WWI1 1683 aa15.67■□□□□ 0.1
VPS16-202ENST00000380445 PLEKHM2Q8IWE5 1019 aa15.67■□□□□ 0.1
VPS16-202ENST00000380445 OVOS2A0A0G2JMS6 1433 aa15.66■□□□□ 0.1
VPS16-202ENST00000380445 EIF4A1P60842 406 aaKnown RBP15.66■□□□□ 0.1
VPS16-202ENST00000380445 TBC1D2Q9BYX2 928 aa15.66■□□□□ 0.1
VPS16-202ENST00000380445 LGR6Q9HBX8 967 aa15.66■□□□□ 0.1
VPS16-202ENST00000380445 CDC45O75419 566 aa15.65■□□□□ 0.1
VPS16-202ENST00000380445 NECTIN2Q92692 538 aa15.65■□□□□ 0.1
VPS16-202ENST00000380445 RGPD2P0DJD1 1756 aa15.65■□□□□ 0.1
VPS16-202ENST00000380445 TMEM94Q12767 1356 aa15.65■□□□□ 0.1
VPS16-202ENST00000380445 BTBD11A6QL63 1104 aa15.64■□□□□ 0.09
VPS16-202ENST00000380445 CADPS2Q86UW7 1296 aa15.64■□□□□ 0.09
VPS16-202ENST00000380445 TTC22Q5TAA0 569 aa15.64■□□□□ 0.09
VPS16-202ENST00000380445 TBC1D9Q6ZT07 1266 aa15.64■□□□□ 0.09
VPS16-202ENST00000380445 CAMTA1Q9Y6Y1 1673 aa15.64■□□□□ 0.09
VPS16-202ENST00000380445 RNMTO43148 476 aaKnown RBP15.64■□□□□ 0.09
VPS16-202ENST00000380445 KDM3BQ7LBC6 1761 aa15.63■□□□□ 0.09
VPS16-202ENST00000380445 ALS2Q96Q42 1657 aa15.63■□□□□ 0.09
VPS16-202ENST00000380445 NPHP3Q7Z494 1330 aa15.62■□□□□ 0.09
VPS16-202ENST00000380445 MPRIPQ6WCQ1 1025 aa15.62■□□□□ 0.09
VPS16-202ENST00000380445 N4BP2Q86UW6 1770 aaPredicted RBP15.62■□□□□ 0.09
VPS16-202ENST00000380445 ERBB3P21860 1342 aa15.62■□□□□ 0.09
VPS16-202ENST00000380445 HSCBQ8IWL3 235 aa15.62■□□□□ 0.09
VPS16-202ENST00000380445 AXIN2Q9Y2T1 843 aa15.62■□□□□ 0.09
VPS16-202ENST00000380445 EIF2S2P20042 333 aaKnown RBP15.61■□□□□ 0.09
VPS16-202ENST00000380445 CASC1Q6TDU7 716 aa15.61■□□□□ 0.09
VPS16-202ENST00000380445 GSPT1P15170 499 aaKnown RBP15.61■□□□□ 0.09
VPS16-202ENST00000380445 ATP8B2P98198 1209 aa15.61■□□□□ 0.09
VPS16-202ENST00000380445 ZC3H6P61129 1189 aaKnown RBP15.6■□□□□ 0.09
VPS16-202ENST00000380445 C16orf71Q8IYS4 520 aaPredicted RBP15.6■□□□□ 0.09
VPS16-202ENST00000380445 SNX21Q969T3 373 aa15.6■□□□□ 0.09
VPS16-202ENST00000380445 SLKQ9H2G2 1235 aaPredicted RBP15.6■□□□□ 0.09
VPS16-202ENST00000380445 PODXL2Q9NZ53 605 aa15.6■□□□□ 0.09
VPS16-202ENST00000380445 UBTFL1P0CB47 393 aaPredicted RBP15.59■□□□□ 0.09
VPS16-202ENST00000380445 RAPGEF4Q8WZA2 1011 aa15.59■□□□□ 0.09
VPS16-202ENST00000380445 SRCIN1Q9C0H9 1055 aa15.59■□□□□ 0.09
VPS16-202ENST00000380445 OSBPL3Q9H4L5 887 aa15.59■□□□□ 0.09
VPS16-202ENST00000380445 ANTXR1Q9H6X2 564 aa15.59■□□□□ 0.09
VPS16-202ENST00000380445 PHAXQ9H814 394 aaKnown RBP15.59■□□□□ 0.09
VPS16-202ENST00000380445 APBB1O00213 710 aa15.58■□□□□ 0.09
VPS16-202ENST00000380445 USP44Q9H0E7 712 aa15.58■□□□□ 0.09
VPS16-202ENST00000380445 DBF4Q9UBU7 674 aaPredicted RBP15.58■□□□□ 0.09
VPS16-202ENST00000380445 PLEKHG2Q9H7P9 1386 aa15.58■□□□□ 0.09
VPS16-202ENST00000380445 PXDNQ92626 1479 aa15.58■□□□□ 0.08
VPS16-202ENST00000380445 CHPF2Q9P2E5 772 aa15.58■□□□□ 0.08
VPS16-202ENST00000380445 SMARCA5O60264 1052 aaPredicted RBP15.58■□□□□ 0.08
VPS16-202ENST00000380445 FRAT2O75474 233 aaPredicted RBP15.58■□□□□ 0.08
VPS16-202ENST00000380445 LRRCC1Q9C099 1032 aa15.58■□□□□ 0.08
VPS16-202ENST00000380445 STRCP1A6NGW2 1772 aa15.57■□□□□ 0.08
VPS16-202ENST00000380445 TNS3Q68CZ2 1445 aa15.57■□□□□ 0.08
VPS16-202ENST00000380445 DNAAF4Q8WXU2 420 aa15.57■□□□□ 0.08
VPS16-202ENST00000380445 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.57■□□□□ 0.084e-6■□□□□ 11.2
VPS16-202ENST00000380445 LRRFIP2Q9Y608 721 aaKnown RBP15.57■□□□□ 0.08
VPS16-202ENST00000380445 ABCC6O95255 1503 aa15.57■□□□□ 0.08
VPS16-202ENST00000380445 KCNQ3O43525 872 aa15.56■□□□□ 0.08
VPS16-202ENST00000380445 TATP17735 454 aaPredicted RBP15.56■□□□□ 0.08
VPS16-202ENST00000380445 NLRP2Q9NX02 1062 aa15.56■□□□□ 0.08
VPS16-202ENST00000380445 SPG7Q9UQ90 795 aa15.56■□□□□ 0.08
VPS16-202ENST00000380445 RGPD5Q99666 1765 aa15.56■□□□□ 0.08
VPS16-202ENST00000380445 STRCQ7RTU9 1775 aa15.56■□□□□ 0.08
VPS16-202ENST00000380445 BRPF3Q9ULD4 1205 aa15.56■□□□□ 0.08
VPS16-202ENST00000380445 GIGYF1O75420 1035 aaPredicted RBP15.55■□□□□ 0.08
VPS16-202ENST00000380445 SDSP20132 328 aa15.55■□□□□ 0.08
VPS16-202ENST00000380445 OTUD7AQ8TE49 926 aaPredicted RBP15.55■□□□□ 0.08
VPS16-202ENST00000380445 EXOC6BQ9Y2D4 811 aa15.55■□□□□ 0.08
VPS16-202ENST00000380445 HEG1Q9ULI3 1381 aa15.55■□□□□ 0.08
VPS16-202ENST00000380445 PDE1AP54750 535 aa15.55■□□□□ 0.08
VPS16-202ENST00000380445 GSE1Q14687 1217 aa15.55■□□□□ 0.08
VPS16-202ENST00000380445 HDAC5Q9UQL6 1122 aa15.55■□□□□ 0.08
VPS16-202ENST00000380445 IBTKQ9P2D0 1353 aaPredicted RBP15.55■□□□□ 0.08
VPS16-202ENST00000380445 PNMA6EA0A0J9YXQ4 647 aa15.54■□□□□ 0.08
VPS16-202ENST00000380445 PI4KAP2A4QPH2 592 aa15.54■□□□□ 0.08
VPS16-202ENST00000380445 PI4KAP1Q8N8J0 262 aa15.54■□□□□ 0.08
VPS16-202ENST00000380445 CHMP5Q9NZZ3 219 aa15.54■□□□□ 0.08
VPS16-202ENST00000380445 ADAMTS7Q9UKP4 1686 aa15.54■□□□□ 0.08
VPS16-202ENST00000380445 BEND3Q5T5X7 828 aa15.54■□□□□ 0.08
VPS16-202ENST00000380445 SSH3Q8TE77 659 aa15.54■□□□□ 0.08
VPS16-202ENST00000380445 RAB11FIP3O75154 756 aa15.53■□□□□ 0.08
VPS16-202ENST00000380445 CSB-PGBD3P0DP91 1061 aa15.53■□□□□ 0.08
VPS16-202ENST00000380445 SPATA31A3Q5VYP0 1347 aa15.53■□□□□ 0.08
VPS16-202ENST00000380445 DDX17Q92841 729 aaKnown RBP15.53■□□□□ 0.08
VPS16-202ENST00000380445 HYPKQ9NX55 129 aa15.53■□□□□ 0.08
VPS16-202ENST00000380445 REC8O95072 547 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms