RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 DISP3Q9P2K9 1392 aa7.89□□□□□ -1.15
RIPK1-202ENST00000380409 PLCH2O75038 1416 aa7.89□□□□□ -1.15
RIPK1-202ENST00000380409 PRAG1Q86YV5 1406 aa7.89□□□□□ -1.15
RIPK1-202ENST00000380409 ABCA6Q8N139 1617 aa7.89□□□□□ -1.15
RIPK1-202ENST00000380409 FUCA2Q9BTY2 467 aa7.89□□□□□ -1.15
RIPK1-202ENST00000380409 CXorf56Q9H5V9 222 aa7.89□□□□□ -1.15
RIPK1-202ENST00000380409 BSDC1Q9NW68 430 aaPredicted RBP7.89□□□□□ -1.15
RIPK1-202ENST00000380409 SEMA3FQ13275 785 aa7.89□□□□□ -1.15
RIPK1-202ENST00000380409 BMS1Q14692 1282 aaKnown RBP7.89□□□□□ -1.15
RIPK1-202ENST00000380409 JRKLQ9Y4A0 524 aa7.89□□□□□ -1.15
RIPK1-202ENST00000380409 ASXL1Q8IXJ9 1541 aa7.88□□□□□ -1.15
RIPK1-202ENST00000380409 MED14O60244 1454 aa7.88□□□□□ -1.15
RIPK1-202ENST00000380409 PLA2G4AP47712 749 aa7.88□□□□□ -1.15
RIPK1-202ENST00000380409 ZRANB2O95218 330 aaKnown RBP eCLIP7.88□□□□□ -1.15
RIPK1-202ENST00000380409 MBD3O95983 291 aa7.88□□□□□ -1.15
RIPK1-202ENST00000380409 NBPF11Q86T75 865 aa7.88□□□□□ -1.15
RIPK1-202ENST00000380409 TRERF1Q96PN7 1200 aa7.88□□□□□ -1.15
RIPK1-202ENST00000380409 NOL10Q9BSC4 688 aaKnown RBP7.88□□□□□ -1.15
RIPK1-202ENST00000380409 TMX1Q9H3N1 280 aa7.88□□□□□ -1.15
RIPK1-202ENST00000380409 USP25Q9UHP3 1055 aa7.88□□□□□ -1.15
RIPK1-202ENST00000380409 KNDC1Q76NI1 1749 aa7.87□□□□□ -1.15
RIPK1-202ENST00000380409 TXLNBQ8N3L3 684 aa7.87□□□□□ -1.15
RIPK1-202ENST00000380409 SUFUQ9UMX1 484 aa7.87□□□□□ -1.15
RIPK1-202ENST00000380409 PLA2R1Q13018 1463 aa7.87□□□□□ -1.15
RIPK1-202ENST00000380409 ADCY5O95622 1261 aa7.87□□□□□ -1.15
RIPK1-202ENST00000380409 ANAPC15P60006 121 aa7.87□□□□□ -1.15
RIPK1-202ENST00000380409 FOXD4L1Q9NU39 408 aa7.87□□□□□ -1.15
RIPK1-202ENST00000380409 DNAJC21Q5F1R6 531 aaKnown RBP7.87□□□□□ -1.15
RIPK1-202ENST00000380409 GPATCH8Q9UKJ3 1502 aaKnown RBP7.86□□□□□ -1.15
RIPK1-202ENST00000380409 KLHL33A6NCF5 533 aa7.86□□□□□ -1.15
RIPK1-202ENST00000380409 ANKRD33BA6NCL7 494 aa7.86□□□□□ -1.15
RIPK1-202ENST00000380409 PIP4K2BP78356 416 aa7.86□□□□□ -1.15
RIPK1-202ENST00000380409 MAP9Q49MG5 647 aa7.86□□□□□ -1.15
RIPK1-202ENST00000380409 PAXBP1Q9Y5B6 917 aa7.86□□□□□ -1.15
RIPK1-202ENST00000380409 SYCP2Q9BX26 1530 aa7.86□□□□□ -1.15
RIPK1-202ENST00000380409 TPM3P06753 285 aa7.86□□□□□ -1.15
RIPK1-202ENST00000380409 NBPF9Q3BBW0 867 aa7.86□□□□□ -1.15
RIPK1-202ENST00000380409 ITPRIPQ8IWB1 547 aa7.86□□□□□ -1.15
RIPK1-202ENST00000380409 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.86□□□□□ -1.152e-6■■□□□ 13.1
RIPK1-202ENST00000380409 RWDD1Q9H446 243 aaPredicted RBP7.86□□□□□ -1.15
RIPK1-202ENST00000380409 PSD3Q9NYI0 1048 aa7.86□□□□□ -1.15
RIPK1-202ENST00000380409 PRPF40AO75400 957 aaKnown RBP7.86□□□□□ -1.15
RIPK1-202ENST00000380409 RPAINQ86UA6 219 aa7.86□□□□□ -1.15
RIPK1-202ENST00000380409 REXO1L1PQ8IX06 675 aa7.86□□□□□ -1.15
RIPK1-202ENST00000380409 TESK2Q96S53 571 aa7.86□□□□□ -1.15
RIPK1-202ENST00000380409 RBM42Q9BTD8 480 aaKnown RBP7.86□□□□□ -1.15
RIPK1-202ENST00000380409 BMP2KLQ5H9B9 411 aa7.85□□□□□ -1.15
RIPK1-202ENST00000380409 RNF214Q8ND24 703 aa7.85□□□□□ -1.15
RIPK1-202ENST00000380409 MNS1Q8NEH6 495 aa7.85□□□□□ -1.15
RIPK1-202ENST00000380409 TNNQ9UQP3 1299 aa7.85□□□□□ -1.15
RIPK1-202ENST00000380409 SETD1AO15047 1707 aaKnown RBP7.85□□□□□ -1.15
RIPK1-202ENST00000380409 KDM5AP29375 1690 aaKnown RBP7.85□□□□□ -1.15
RIPK1-202ENST00000380409 KDM4AO75164 1064 aa7.85□□□□□ -1.15
RIPK1-202ENST00000380409 RPS6KA5O75582 802 aa7.85□□□□□ -1.15
RIPK1-202ENST00000380409 RARSP54136 660 aaKnown RBP7.85□□□□□ -1.15
RIPK1-202ENST00000380409 TRDNQ13061 729 aa7.85□□□□□ -1.15
RIPK1-202ENST00000380409 JMYQ8N9B5 988 aa7.85□□□□□ -1.15
RIPK1-202ENST00000380409 TMEM87AQ8NBN3 555 aa7.85□□□□□ -1.15
RIPK1-202ENST00000380409 CEP89Q96ST8 783 aa7.85□□□□□ -1.15
RIPK1-202ENST00000380409 KCND1Q9NSA2 647 aa7.85□□□□□ -1.15
RIPK1-202ENST00000380409 NEK11Q8NG66 645 aa7.85□□□□□ -1.15
RIPK1-202ENST00000380409 MYOM2P54296 1465 aa7.84□□□□□ -1.15
RIPK1-202ENST00000380409 ATAD2Q6PL18 1390 aa7.84□□□□□ -1.15
RIPK1-202ENST00000380409 A0A1B0GUL7 405 aa7.84□□□□□ -1.15
RIPK1-202ENST00000380409 PPP1R12AO14974 1030 aaPredicted RBP7.84□□□□□ -1.15
RIPK1-202ENST00000380409 PPP2R1AP30153 589 aa7.84□□□□□ -1.15
RIPK1-202ENST00000380409 MAGEA9P43362 315 aa7.84□□□□□ -1.15
RIPK1-202ENST00000380409 NYAP1Q6ZVC0 841 aa7.84□□□□□ -1.15
RIPK1-202ENST00000380409 FBXO18Q8NFZ0 1043 aa7.84□□□□□ -1.15
RIPK1-202ENST00000380409 RRP15Q9Y3B9 282 aaKnown RBP7.84□□□□□ -1.15
RIPK1-202ENST00000380409 ERBINQ96RT1 1412 aa7.84□□□□□ -1.15
RIPK1-202ENST00000380409 NCKAP5LQ9HCH0 1330 aa7.84□□□□□ -1.15
RIPK1-202ENST00000380409 C21orf2O43822 256 aa7.84□□□□□ -1.15
RIPK1-202ENST00000380409 ZKSCAN8Q15776 578 aaPredicted RBP7.84□□□□□ -1.15
RIPK1-202ENST00000380409 GPATCH11Q8N954 259 aa7.84□□□□□ -1.15
RIPK1-202ENST00000380409 SRCAPQ6ZRS2 3230 aa7.84□□□□□ -1.15
RIPK1-202ENST00000380409 TMEM132EQ6IEE7 984 aa7.84□□□□□ -1.15
RIPK1-202ENST00000380409 C10orf67Q8IYJ2 551 aa7.84□□□□□ -1.15
RIPK1-202ENST00000380409 TBC1D22AQ8WUA7 517 aa7.84□□□□□ -1.15
RIPK1-202ENST00000380409 SMARCE1Q969G3 411 aa7.84□□□□□ -1.15
RIPK1-202ENST00000380409 USP26Q9BXU7 913 aa7.84□□□□□ -1.15
RIPK1-202ENST00000380409 USP32Q8NFA0 1604 aa7.84□□□□□ -1.16
RIPK1-202ENST00000380409 RPAP1Q9BWH6 1393 aaPredicted RBP7.84□□□□□ -1.16
RIPK1-202ENST00000380409 KIF3CO14782 793 aa7.83□□□□□ -1.16
RIPK1-202ENST00000380409 TNNT3P45378 269 aaPredicted RBP7.83□□□□□ -1.16
RIPK1-202ENST00000380409 KRBA2Q6ZNG9 492 aa7.83□□□□□ -1.16
RIPK1-202ENST00000380409 ZSCAN16Q9H4T2 348 aaPredicted RBP7.83□□□□□ -1.16
RIPK1-202ENST00000380409 ZNF853P0CG23 659 aa7.83□□□□□ -1.16
RIPK1-202ENST00000380409 NUCB1Q02818 461 aa7.83□□□□□ -1.16
RIPK1-202ENST00000380409 MVPQ14764 893 aaKnown RBP7.83□□□□□ -1.16
RIPK1-202ENST00000380409 CCDC91Q7Z6B0 441 aa7.83□□□□□ -1.16
RIPK1-202ENST00000380409 FAM177A1Q8N128 213 aaPredicted RBP7.83□□□□□ -1.16
RIPK1-202ENST00000380409 GOLGA5Q8TBA6 731 aa7.83□□□□□ -1.16
RIPK1-202ENST00000380409 INO80Q9ULG1 1556 aaPredicted RBP7.83□□□□□ -1.16
RIPK1-202ENST00000380409 EXOC6BQ9Y2D4 811 aa7.83□□□□□ -1.16
RIPK1-202ENST00000380409 GOLIM4O00461 696 aa7.83□□□□□ -1.16
RIPK1-202ENST00000380409 PNMA6AP0CW24 399 aaPredicted RBP7.83□□□□□ -1.16
RIPK1-202ENST00000380409 ST5P78524 1137 aa7.83□□□□□ -1.16
RIPK1-202ENST00000380409 TTC36A6NLP5 189 aa7.82□□□□□ -1.16
RIPK1-202ENST00000380409 SART3Q15020 963 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms