RNA–Protein interactions for RNA: ENST00000379472.4

KCNC1-202, Transcript of potassium voltage-gated channel subfamily C member 1, humanhuman

TSL 1 (best) BASIC

Gene KCNC1, Length 7,965 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1-202ENST00000379472 DHX57Q6P158 1386 aaKnown RBP18.54■□□□□ 0.56
KCNC1-202ENST00000379472 PRC1O43663 620 aa18.54■□□□□ 0.56
KCNC1-202ENST00000379472 GGNBP2Q9H3C7 697 aa18.54■□□□□ 0.56
KCNC1-202ENST00000379472 CTNNA3Q9UI47 895 aa18.54■□□□□ 0.56
KCNC1-202ENST00000379472 KRT85P78386 507 aa18.54■□□□□ 0.56
KCNC1-202ENST00000379472 RAB34Q9BZG1 259 aa18.54■□□□□ 0.56
KCNC1-202ENST00000379472 CFAP100Q494V2 611 aa18.54■□□□□ 0.56
KCNC1-202ENST00000379472 CABP2Q9NPB3 220 aa18.54■□□□□ 0.56
KCNC1-202ENST00000379472 DAAM2Q86T65 1068 aa18.54■□□□□ 0.56
KCNC1-202ENST00000379472 UPF3BQ9BZI7 483 aaKnown RBP18.54■□□□□ 0.56
KCNC1-202ENST00000379472 HDGFL1Q5TGJ6 251 aa18.53■□□□□ 0.56
KCNC1-202ENST00000379472 C1orf115Q9H7X2 142 aa18.53■□□□□ 0.56
KCNC1-202ENST00000379472 TDRD12Q587J7 1177 aaKnown RBP18.53■□□□□ 0.56
KCNC1-202ENST00000379472 CFAP58Q5T655 872 aa18.53■□□□□ 0.56
KCNC1-202ENST00000379472 AACSQ86V21 672 aa18.53■□□□□ 0.56
KCNC1-202ENST00000379472 CEP126Q9P2H0 1117 aa18.53■□□□□ 0.56
KCNC1-202ENST00000379472 BAG4O95429 457 aaKnown RBP18.52■□□□□ 0.56
KCNC1-202ENST00000379472 SPATA32Q96LK8 384 aa18.52■□□□□ 0.56
KCNC1-202ENST00000379472 FMN1Q68DA7 1419 aa18.52■□□□□ 0.56
KCNC1-202ENST00000379472 CCDC18Q5T9S5 1454 aa18.52■□□□□ 0.56
KCNC1-202ENST00000379472 PANK1Q8TE04 598 aa18.52■□□□□ 0.56
KCNC1-202ENST00000379472 MAP9Q49MG5 647 aa18.52■□□□□ 0.55
KCNC1-202ENST00000379472 CCDC117Q8IWD4 279 aaPredicted RBP18.52■□□□□ 0.55
KCNC1-202ENST00000379472 STARD3NLO95772 234 aa18.52■□□□□ 0.55
KCNC1-202ENST00000379472 CASQ1P31415 396 aa18.52■□□□□ 0.55
KCNC1-202ENST00000379472 NLRP5P59047 1200 aa18.52■□□□□ 0.55
KCNC1-202ENST00000379472 METTL24Q5JXM2 366 aa18.52■□□□□ 0.55
KCNC1-202ENST00000379472 GTPBP4Q9BZE4 634 aaKnown RBP18.52■□□□□ 0.55
KCNC1-202ENST00000379472 TPD52P55327 224 aaPredicted RBP18.51■□□□□ 0.55
KCNC1-202ENST00000379472 MAPK8IP2Q13387 824 aaPredicted RBP18.51■□□□□ 0.55
KCNC1-202ENST00000379472 SNX16P57768 344 aa18.51■□□□□ 0.55
KCNC1-202ENST00000379472 PPP1R9BQ96SB3 815 aa18.51■□□□□ 0.55
KCNC1-202ENST00000379472 RAD54L2Q9Y4B4 1467 aa18.51■□□□□ 0.55
KCNC1-202ENST00000379472 BBXQ8WY36 941 aaPredicted RBP18.51■□□□□ 0.55
KCNC1-202ENST00000379472 MMRN2Q9H8L6 949 aa18.51■□□□□ 0.55
KCNC1-202ENST00000379472 PRDM11Q9NQV5 511 aa18.51■□□□□ 0.55
KCNC1-202ENST00000379472 CEP135Q66GS9 1140 aa18.51■□□□□ 0.55
KCNC1-202ENST00000379472 MRE11P49959 708 aa18.5■□□□□ 0.55
KCNC1-202ENST00000379472 MXRA7P84157 204 aa18.5■□□□□ 0.55
KCNC1-202ENST00000379472 TCERG1LQ5VWI1 586 aa18.5■□□□□ 0.55
KCNC1-202ENST00000379472 HLTFQ14527 1009 aaKnown RBP eCLIP18.5■□□□□ 0.55
KCNC1-202ENST00000379472 MAP7D1Q3KQU3 841 aa18.5■□□□□ 0.55
KCNC1-202ENST00000379472 MYO1BO43795 1136 aa18.5■□□□□ 0.55
KCNC1-202ENST00000379472 A0A1W2PRG0 241 aa18.5■□□□□ 0.55
KCNC1-202ENST00000379472 BLOC1S2Q6QNY1 142 aa18.5■□□□□ 0.55
KCNC1-202ENST00000379472 ALS2CR12Q96Q35 445 aa18.5■□□□□ 0.55
KCNC1-202ENST00000379472 TTC21AQ8NDW8 1320 aa18.49■□□□□ 0.55
KCNC1-202ENST00000379472 FILIP1Q7Z7B0 1213 aa18.49■□□□□ 0.55
KCNC1-202ENST00000379472 CCDC160A6NGH7 325 aa18.49■□□□□ 0.55
KCNC1-202ENST00000379472 RAB3GAP2Q9H2M9 1393 aa18.49■□□□□ 0.55
KCNC1-202ENST00000379472 SLF2Q8IX21 1173 aa18.49■□□□□ 0.55
KCNC1-202ENST00000379472 CCDC174Q6PII3 467 aa18.48■□□□□ 0.55
KCNC1-202ENST00000379472 DPH6Q7L8W6 267 aa18.48■□□□□ 0.55
KCNC1-202ENST00000379472 PRDM2Q13029 1718 aa18.48■□□□□ 0.55
KCNC1-202ENST00000379472 TRAK2O60296 914 aa18.48■□□□□ 0.55
KCNC1-202ENST00000379472 SATB1Q01826 763 aa18.48■□□□□ 0.55
KCNC1-202ENST00000379472 RANBP6O60518 1105 aaKnown RBP18.48■□□□□ 0.55
KCNC1-202ENST00000379472 SMC1BQ8NDV3 1235 aa18.48■□□□□ 0.55
KCNC1-202ENST00000379472 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.48■□□□□ 0.55
KCNC1-202ENST00000379472 V9GYY5 206 aaPredicted RBP18.48■□□□□ 0.55
KCNC1-202ENST00000379472 BTBD11A6QL63 1104 aa18.47■□□□□ 0.55
KCNC1-202ENST00000379472 NAP1L3Q99457 506 aaPredicted RBP18.47■□□□□ 0.55
KCNC1-202ENST00000379472 PAIP2Q9BPZ3 127 aaKnown RBP18.47■□□□□ 0.55
KCNC1-202ENST00000379472 TTC36A6NLP5 189 aa18.47■□□□□ 0.55
KCNC1-202ENST00000379472 KIF5CO60282 957 aa18.47■□□□□ 0.55
KCNC1-202ENST00000379472 PAFAH1B1P43034 410 aa18.47■□□□□ 0.55
KCNC1-202ENST00000379472 ZNF530Q6P9A1 599 aaPredicted RBP18.47■□□□□ 0.55
KCNC1-202ENST00000379472 RRBP1Q9P2E9 1410 aaKnown RBP18.47■□□□□ 0.55
KCNC1-202ENST00000379472 USO1O60763 962 aaKnown RBP18.46■□□□□ 0.55
KCNC1-202ENST00000379472 SLC4A2P04920 1241 aa18.46■□□□□ 0.55
KCNC1-202ENST00000379472 SIRT1Q96EB6 747 aa18.46■□□□□ 0.55
KCNC1-202ENST00000379472 NUP88Q99567 741 aaPredicted RBP18.46■□□□□ 0.55
KCNC1-202ENST00000379472 CWC27Q6UX04 472 aaKnown RBP18.46■□□□□ 0.55
KCNC1-202ENST00000379472 TXNDC2Q86VQ3 553 aa18.46■□□□□ 0.55
KCNC1-202ENST00000379472 GBP3Q9H0R5 595 aa18.46■□□□□ 0.55
KCNC1-202ENST00000379472 CCDC63Q8NA47 563 aa18.46■□□□□ 0.55
KCNC1-202ENST00000379472 C6orf229H3BNL8 230 aa18.46■□□□□ 0.55
KCNC1-202ENST00000379472 PRKCSHP14314 528 aaPredicted RBP18.46■□□□□ 0.55
KCNC1-202ENST00000379472 NCBP1Q09161 790 aaKnown RBP18.46■□□□□ 0.55
KCNC1-202ENST00000379472 STXBP4Q6ZWJ1 553 aa18.46■□□□□ 0.55
KCNC1-202ENST00000379472 ZNF622Q969S3 477 aaKnown RBP eCLIP18.46■□□□□ 0.55
KCNC1-202ENST00000379472 HAUS7Q99871 368 aa18.46■□□□□ 0.55
KCNC1-202ENST00000379472 PDRG1Q9NUG6 133 aa18.46■□□□□ 0.55
KCNC1-202ENST00000379472 ANAPC4Q9UJX5 808 aa18.45■□□□□ 0.54
KCNC1-202ENST00000379472 DDX11Q96FC9 970 aa18.45■□□□□ 0.54
KCNC1-202ENST00000379472 MCM3P25205 808 aa18.45■□□□□ 0.54
KCNC1-202ENST00000379472 ATP2B3Q16720 1220 aa18.45■□□□□ 0.54
KCNC1-202ENST00000379472 IQCGQ9H095 443 aaKnown RBP18.45■□□□□ 0.54
KCNC1-202ENST00000379472 PHACTR2O75167 634 aa18.45■□□□□ 0.54
KCNC1-202ENST00000379472 ATF7IPQ6VMQ6 1270 aa18.45■□□□□ 0.54
KCNC1-202ENST00000379472 STX6O43752 255 aa18.45■□□□□ 0.54
KCNC1-202ENST00000379472 FBF1Q8TES7 1133 aa18.45■□□□□ 0.54
KCNC1-202ENST00000379472 WDR33Q9C0J8 1336 aaKnown RBP18.45■□□□□ 0.54
KCNC1-202ENST00000379472 VAT1LQ9HCJ6 419 aa18.44■□□□□ 0.54
KCNC1-202ENST00000379472 JAKMIP1Q96N16 626 aaKnown RBP18.44■□□□□ 0.54
KCNC1-202ENST00000379472 CTCFLQ8NI51 663 aaPredicted RBP18.44■□□□□ 0.54
KCNC1-202ENST00000379472 TMX1Q9H3N1 280 aa18.44■□□□□ 0.54
KCNC1-202ENST00000379472 CCDC144CPQ8IYA2 1237 aa18.44■□□□□ 0.54
KCNC1-202ENST00000379472 CABP5Q9NP86 173 aa18.44■□□□□ 0.54
KCNC1-202ENST00000379472 PLS1Q14651 629 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms