RNA–Protein interactions for RNA: ENST00000379384.9

TM6SF1-203, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 5

Gene TM6SF1, Length 1,808 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-203ENST00000379384 SLC52A2Q9HAB3 445 aa23.81■■□□□ 1.4
TM6SF1-203ENST00000379384 PALLDQ8WX93 1383 aa23.81■■□□□ 1.4
TM6SF1-203ENST00000379384 ASAP1Q9ULH1 1129 aa23.8■■□□□ 1.4
TM6SF1-203ENST00000379384 MCM10Q7L590 875 aa23.8■■□□□ 1.4
TM6SF1-203ENST00000379384 CEMIPQ8WUJ3 1361 aa23.78■■□□□ 1.4
TM6SF1-203ENST00000379384 DCTN1Q14203 1278 aa23.78■■□□□ 1.4
TM6SF1-203ENST00000379384 ATG3Q9NT62 314 aa23.78■■□□□ 1.4
TM6SF1-203ENST00000379384 TAF1LQ8IZX4 1826 aa23.78■■□□□ 1.4
TM6SF1-203ENST00000379384 TEFQ10587 303 aa23.77■■□□□ 1.4
TM6SF1-203ENST00000379384 SMARCC1Q92922 1105 aaPredicted RBP23.77■■□□□ 1.4
TM6SF1-203ENST00000379384 PAPPAQ13219 1627 aa23.77■■□□□ 1.4
TM6SF1-203ENST00000379384 TMPOP42166 694 aaKnown RBP23.77■■□□□ 1.4
TM6SF1-203ENST00000379384 KCNQ4P56696 695 aa23.77■■□□□ 1.4
TM6SF1-203ENST00000379384 NEUROD2Q15784 382 aa23.77■■□□□ 1.4
TM6SF1-203ENST00000379384 RRP7AQ9Y3A4 280 aaKnown RBP23.77■■□□□ 1.4
TM6SF1-203ENST00000379384 HTATSF1O43719 755 aaKnown RBP23.76■■□□□ 1.39
TM6SF1-203ENST00000379384 RIPK4P57078 832 aa23.76■■□□□ 1.39
TM6SF1-203ENST00000379384 LRRC4BQ9NT99 713 aa23.76■■□□□ 1.39
TM6SF1-203ENST00000379384 SRCAPQ6ZRS2 3230 aa23.76■■□□□ 1.39
TM6SF1-203ENST00000379384 C5P01031 1676 aa23.76■■□□□ 1.39
TM6SF1-203ENST00000379384 CCNL1Q9UK58 526 aaPredicted RBP23.75■■□□□ 1.39
TM6SF1-203ENST00000379384 SLC27A3Q5K4L6 730 aa23.75■■□□□ 1.39
TM6SF1-203ENST00000379384 FAM9BQ8IZU0 186 aa23.75■■□□□ 1.39
TM6SF1-203ENST00000379384 UBR2Q8IWV8 1755 aa23.72■■□□□ 1.39
TM6SF1-203ENST00000379384 APAF1O14727 1248 aa23.72■■□□□ 1.39
TM6SF1-203ENST00000379384 SLC39A6Q13433 755 aa23.72■■□□□ 1.39
TM6SF1-203ENST00000379384 LOC102724428A0A0B4J2F2 783 aa23.71■■□□□ 1.39
TM6SF1-203ENST00000379384 CCER2I3L3R5 266 aa23.71■■□□□ 1.39
TM6SF1-203ENST00000379384 SIK1P57059 783 aa23.71■■□□□ 1.39
TM6SF1-203ENST00000379384 THUMPD2Q9BTF0 503 aaKnown RBP23.71■■□□□ 1.39
TM6SF1-203ENST00000379384 NBPF14Q5TI25 921 aa23.7■■□□□ 1.39
TM6SF1-203ENST00000379384 RBM42Q9BTD8 480 aaKnown RBP23.7■■□□□ 1.39
TM6SF1-203ENST00000379384 ZNF831Q5JPB2 1677 aa23.7■■□□□ 1.38
TM6SF1-203ENST00000379384 PTCD1O75127 700 aaKnown RBP23.7■■□□□ 1.38
TM6SF1-203ENST00000379384 ANO8Q9HCE9 1232 aaPredicted RBP23.7■■□□□ 1.38
TM6SF1-203ENST00000379384 SENP3-EIF4A1A0A087X0R7 540 aa23.68■■□□□ 1.38
TM6SF1-203ENST00000379384 BTBD11A6QL63 1104 aa23.68■■□□□ 1.38
TM6SF1-203ENST00000379384 ATP6V1AP38606 617 aa23.68■■□□□ 1.38
TM6SF1-203ENST00000379384 LMOD3Q0VAK6 560 aa23.68■■□□□ 1.38
TM6SF1-203ENST00000379384 TUBGCP6Q96RT7 1819 aa23.68■■□□□ 1.38
TM6SF1-203ENST00000379384 KCPQ6ZWJ8 1503 aa23.67■■□□□ 1.38
TM6SF1-203ENST00000379384 COL5A3P25940 1745 aaPredicted RBP23.67■■□□□ 1.38
TM6SF1-203ENST00000379384 PSDA5PKW4 1024 aaPredicted RBP23.67■■□□□ 1.38
TM6SF1-203ENST00000379384 TTC5Q8N0Z6 440 aa23.67■■□□□ 1.38
TM6SF1-203ENST00000379384 C4BP0C0L5 1744 aa23.67■■□□□ 1.38
TM6SF1-203ENST00000379384 R3HDM1Q15032 1099 aaKnown RBP23.66■■□□□ 1.38
TM6SF1-203ENST00000379384 SLC4A9Q96Q91 983 aa23.66■■□□□ 1.38
TM6SF1-203ENST00000379384 TRIM35Q9UPQ4 493 aa23.66■■□□□ 1.38
TM6SF1-203ENST00000379384 KDM3BQ7LBC6 1761 aa23.66■■□□□ 1.38
TM6SF1-203ENST00000379384 TJP1Q07157 1748 aa23.66■■□□□ 1.38
TM6SF1-203ENST00000379384 ZNF790Q6PG37 636 aa23.66■■□□□ 1.38
TM6SF1-203ENST00000379384 TAF7Q15545 349 aaPredicted RBP23.65■■□□□ 1.38
TM6SF1-203ENST00000379384 STK32BQ9NY57 414 aa23.65■■□□□ 1.38
TM6SF1-203ENST00000379384 ITPK1Q13572 414 aa23.64■■□□□ 1.38
TM6SF1-203ENST00000379384 SLC15A2Q16348 729 aa23.63■■□□□ 1.37
TM6SF1-203ENST00000379384 ZNF827Q17R98 1081 aa23.63■■□□□ 1.37
TM6SF1-203ENST00000379384 MIS18AQ9NYP9 233 aa23.63■■□□□ 1.37
TM6SF1-203ENST00000379384 CICQ96RK0 1608 aaPredicted RBP23.63■■□□□ 1.37
TM6SF1-203ENST00000379384 KCNQ3O43525 872 aa23.62■■□□□ 1.37
TM6SF1-203ENST00000379384 LINC00116Q8NCU8 138 aa23.62■■□□□ 1.37
TM6SF1-203ENST00000379384 MYH14Q7Z406 1995 aaKnown RBP23.62■■□□□ 1.37
TM6SF1-203ENST00000379384 QSER1Q2KHR3 1735 aa23.61■■□□□ 1.37
TM6SF1-203ENST00000379384 UBR3Q6ZT12 1888 aa23.61■■□□□ 1.37
TM6SF1-203ENST00000379384 AKT1S1Q96B36 256 aa23.61■■□□□ 1.37
TM6SF1-203ENST00000379384 ZNF496Q96IT1 587 aaPredicted RBP23.61■■□□□ 1.37
TM6SF1-203ENST00000379384 HMGB2P26583 209 aaKnown RBP23.59■■□□□ 1.37
TM6SF1-203ENST00000379384 FMNL2Q96PY5 1086 aa23.59■■□□□ 1.37
TM6SF1-203ENST00000379384 TFCP2L1Q9NZI6 479 aa23.59■■□□□ 1.37
TM6SF1-203ENST00000379384 SALL2Q9Y467 1007 aaPredicted RBP23.58■■□□□ 1.37
TM6SF1-203ENST00000379384 AK7Q96M32 723 aa23.57■■□□□ 1.36
TM6SF1-203ENST00000379384 HEG1Q9ULI3 1381 aa23.57■■□□□ 1.36
TM6SF1-203ENST00000379384 CASZ1Q86V15 1759 aa23.57■■□□□ 1.36
TM6SF1-203ENST00000379384 DNAJC10Q8IXB1 793 aa23.56■■□□□ 1.36
TM6SF1-203ENST00000379384 VSIG10Q8N0Z9 540 aa23.56■■□□□ 1.36
TM6SF1-203ENST00000379384 TSPYL4Q9UJ04 414 aa23.56■■□□□ 1.36
TM6SF1-203ENST00000379384 LAS1LQ9Y4W2 734 aaKnown RBP23.56■■□□□ 1.36
TM6SF1-203ENST00000379384 PDGFDQ9GZP0 370 aaPredicted RBP23.55■■□□□ 1.36
TM6SF1-203ENST00000379384 CCDC27Q2M243 656 aa23.54■■□□□ 1.36
TM6SF1-203ENST00000379384 GNPATO15228 680 aa23.53■■□□□ 1.36
TM6SF1-203ENST00000379384 WWC1Q8IX03 1113 aa23.53■■□□□ 1.36
TM6SF1-203ENST00000379384 CRKLP46109 303 aaKnown RBP23.52■■□□□ 1.36
TM6SF1-203ENST00000379384 PNPLA7Q6ZV29 1317 aa23.52■■□□□ 1.36
TM6SF1-203ENST00000379384 CNTNAP4Q9C0A0 1308 aa23.52■■□□□ 1.36
TM6SF1-203ENST00000379384 LAMB4A4D0S4 1761 aa23.52■■□□□ 1.36
TM6SF1-203ENST00000379384 AMIGO3Q86WK7 504 aa23.52■■□□□ 1.36
TM6SF1-203ENST00000379384 BABAM1Q9NWV8 329 aa23.52■■□□□ 1.36
TM6SF1-203ENST00000379384 PRAMEF22A3QJZ6 481 aa23.51■■□□□ 1.35
TM6SF1-203ENST00000379384 CYP19A1P11511 503 aaPredicted RBP23.51■■□□□ 1.35
TM6SF1-203ENST00000379384 CALD1Q05682 793 aaKnown RBP23.51■■□□□ 1.35
TM6SF1-203ENST00000379384 SMIM5Q71RC9 77 aa23.51■■□□□ 1.35
TM6SF1-203ENST00000379384 CHL1O00533 1208 aa23.5■■□□□ 1.35
TM6SF1-203ENST00000379384 PHF14O94880 888 aa23.5■■□□□ 1.35
TM6SF1-203ENST00000379384 EIF4A1P60842 406 aaKnown RBP23.5■■□□□ 1.35
TM6SF1-203ENST00000379384 NCBP3Q53F19 620 aaKnown RBP23.5■■□□□ 1.35
TM6SF1-203ENST00000379384 RC3H1Q5TC82 1133 aaKnown RBP23.5■■□□□ 1.35
TM6SF1-203ENST00000379384 CFAP44Q96MT7 982 aa23.5■■□□□ 1.35
TM6SF1-203ENST00000379384 SNRPA1P09661 255 aaKnown RBP23.49■■□□□ 1.35
TM6SF1-203ENST00000379384 TEX13AQ9BXU3 409 aaPredicted RBP23.49■■□□□ 1.35
TM6SF1-203ENST00000379384 STARD3NLO95772 234 aa23.49■■□□□ 1.35
TM6SF1-203ENST00000379384 MSH5O43196 834 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms