RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 NEFHP12036 1026 aa12.86□□□□□ -0.35
LINC00654-201ENST00000379053 NOM1Q5C9Z4 860 aaKnown RBP12.86□□□□□ -0.35
LINC00654-201ENST00000379053 DDX46Q7L014 1031 aaKnown RBP12.86□□□□□ -0.35
LINC00654-201ENST00000379053 NAPBQ9H115 298 aa12.86□□□□□ -0.35
LINC00654-201ENST00000379053 PRPF40AO75400 957 aaKnown RBP12.85□□□□□ -0.35
LINC00654-201ENST00000379053 ZBTB3Q9H5J0 574 aa12.85□□□□□ -0.35
LINC00654-201ENST00000379053 DCTN1Q14203 1278 aa12.85□□□□□ -0.35
LINC00654-201ENST00000379053 ADGRL1O94910 1474 aa12.85□□□□□ -0.35
LINC00654-201ENST00000379053 TMPOP42166 694 aaKnown RBP12.85□□□□□ -0.35
LINC00654-201ENST00000379053 MVPQ14764 893 aaKnown RBP12.85□□□□□ -0.35
LINC00654-201ENST00000379053 PPFIBP1Q86W92 1011 aa12.85□□□□□ -0.35
LINC00654-201ENST00000379053 RPAP2Q8IXW5 612 aaPredicted RBP12.85□□□□□ -0.35
LINC00654-201ENST00000379053 DNAI2Q9GZS0 605 aa12.85□□□□□ -0.35
LINC00654-201ENST00000379053 EFCAB5A4FU69 1503 aa12.85□□□□□ -0.35
LINC00654-201ENST00000379053 CAVIN1Q6NZI2 390 aaKnown RBP12.85□□□□□ -0.35
LINC00654-201ENST00000379053 CUL5Q93034 780 aa12.85□□□□□ -0.35
LINC00654-201ENST00000379053 TEX13AQ9BXU3 409 aaPredicted RBP12.85□□□□□ -0.35
LINC00654-201ENST00000379053 WASLO00401 505 aaPredicted RBP12.84□□□□□ -0.35
LINC00654-201ENST00000379053 CHRNA2Q15822 529 aa12.84□□□□□ -0.35
LINC00654-201ENST00000379053 HECW1Q76N89 1606 aa12.84□□□□□ -0.35
LINC00654-201ENST00000379053 PPM1FP49593 454 aaPredicted RBP12.84□□□□□ -0.35
LINC00654-201ENST00000379053 EXOC6BQ9Y2D4 811 aa12.84□□□□□ -0.35
LINC00654-201ENST00000379053 RANBP6O60518 1105 aaKnown RBP12.84□□□□□ -0.35
LINC00654-201ENST00000379053 KRT85P78386 507 aa12.84□□□□□ -0.35
LINC00654-201ENST00000379053 C11orf95C9JLR9 678 aaPredicted RBP12.84□□□□□ -0.35
LINC00654-201ENST00000379053 ST5P78524 1137 aa12.84□□□□□ -0.35
LINC00654-201ENST00000379053 IFNL2Q8IZJ0 200 aa12.84□□□□□ -0.35
LINC00654-201ENST00000379053 IL27Q8NEV9 243 aa12.83□□□□□ -0.36
LINC00654-201ENST00000379053 KIF1BPQ96EK5 621 aa12.83□□□□□ -0.36
LINC00654-201ENST00000379053 CDC5LQ99459 802 aaKnown RBP12.83□□□□□ -0.36
LINC00654-201ENST00000379053 DAPK1P53355 1430 aa12.83□□□□□ -0.36
LINC00654-201ENST00000379053 CHD1LQ86WJ1 897 aa12.83□□□□□ -0.36
LINC00654-201ENST00000379053 CEP57L1Q8IYX8 460 aa12.83□□□□□ -0.36
LINC00654-201ENST00000379053 MYO1BO43795 1136 aa12.83□□□□□ -0.36
LINC00654-201ENST00000379053 CTCFLQ8NI51 663 aaPredicted RBP12.83□□□□□ -0.36
LINC00654-201ENST00000379053 U3KPZ7 1027 aaPredicted RBP12.83□□□□□ -0.36
LINC00654-201ENST00000379053 ERLIN2O94905 339 aa12.83□□□□□ -0.36
LINC00654-201ENST00000379053 LRRC59Q96AG4 307 aaKnown RBP12.83□□□□□ -0.36
LINC00654-201ENST00000379053 PLB1Q6P1J6 1458 aa12.83□□□□□ -0.36
LINC00654-201ENST00000379053 ARAP1Q96P48 1450 aa12.83□□□□□ -0.36
LINC00654-201ENST00000379053 A0A087WZG4 1122 aa12.82□□□□□ -0.36
LINC00654-201ENST00000379053 ERCC4Q92889 916 aaPredicted RBP12.82□□□□□ -0.36
LINC00654-201ENST00000379053 KIAA0586Q9BVV6 1533 aa12.82□□□□□ -0.36
LINC00654-201ENST00000379053 TXLNBQ8N3L3 684 aa12.82□□□□□ -0.36
LINC00654-201ENST00000379053 IDI1Q13907 227 aa12.82□□□□□ -0.36
LINC00654-201ENST00000379053 CCDC181Q5TID7 509 aa12.82□□□□□ -0.36
LINC00654-201ENST00000379053 PPP1R42Q7Z4L9 355 aa12.82□□□□□ -0.36
LINC00654-201ENST00000379053 EMILIN1Q9Y6C2 1016 aa12.82□□□□□ -0.36
LINC00654-201ENST00000379053 WDR33Q9C0J8 1336 aaKnown RBP12.82□□□□□ -0.36
LINC00654-201ENST00000379053 PPP1R12BO60237 982 aaPredicted RBP12.82□□□□□ -0.36
LINC00654-201ENST00000379053 FAM43AQ8N2R8 423 aa12.82□□□□□ -0.36
LINC00654-201ENST00000379053 ZSCAN31Q96LW9 406 aaPredicted RBP12.82□□□□□ -0.36
LINC00654-201ENST00000379053 BOLA2Q9H3K6 86 aa12.82□□□□□ -0.36
LINC00654-201ENST00000379053 TSPY26PQ9H489 355 aa12.82□□□□□ -0.36
LINC00654-201ENST00000379053 SSR1P43307 286 aaKnown RBP12.82□□□□□ -0.36
LINC00654-201ENST00000379053 NBPF6Q5VWK0 638 aa12.82□□□□□ -0.36
LINC00654-201ENST00000379053 NBPF5PQ86XG9 351 aaPredicted RBP12.82□□□□□ -0.36
LINC00654-201ENST00000379053 IQCA1Q86XH1 822 aa12.82□□□□□ -0.36
LINC00654-201ENST00000379053 NBPF4Q96M43 638 aa12.82□□□□□ -0.36
LINC00654-201ENST00000379053 TNMDQ9H2S6 317 aa12.82□□□□□ -0.36
LINC00654-201ENST00000379053 HYPKQ9NX55 129 aa12.82□□□□□ -0.36
LINC00654-201ENST00000379053 ARHGEF11O15085 1522 aa12.82□□□□□ -0.36
LINC00654-201ENST00000379053 CCP110O43303 1012 aa12.81□□□□□ -0.36
LINC00654-201ENST00000379053 CCDC97Q96F63 343 aaPredicted RBP12.81□□□□□ -0.36
LINC00654-201ENST00000379053 CABP5Q9NP86 173 aa12.81□□□□□ -0.36
LINC00654-201ENST00000379053 LDHCP07864 332 aa12.81□□□□□ -0.36
LINC00654-201ENST00000379053 POTEJP0CG39 1038 aa12.81□□□□□ -0.36
LINC00654-201ENST00000379053 NASPP49321 788 aaPredicted RBP12.81□□□□□ -0.36
LINC00654-201ENST00000379053 ZNF772Q68DY9 489 aaPredicted RBP12.81□□□□□ -0.36
LINC00654-201ENST00000379053 ANKRD62A6NC57 917 aa12.81□□□□□ -0.36
LINC00654-201ENST00000379053 EHMT1Q9H9B1 1298 aa12.81□□□□□ -0.36
LINC00654-201ENST00000379053 GLRX3O76003 335 aaKnown RBP12.81□□□□□ -0.36
LINC00654-201ENST00000379053 DBF4Q9UBU7 674 aaPredicted RBP12.81□□□□□ -0.36
LINC00654-201ENST00000379053 CCDC39Q9UFE4 941 aa12.81□□□□□ -0.36
LINC00654-201ENST00000379053 CEP131Q9UPN4 1083 aa12.81□□□□□ -0.36
LINC00654-201ENST00000379053 CCDC141Q6ZP82 1450 aa12.8□□□□□ -0.36
LINC00654-201ENST00000379053 DNAAF4Q8WXU2 420 aa12.8□□□□□ -0.36
LINC00654-201ENST00000379053 DDX11Q96FC9 970 aa12.8□□□□□ -0.36
LINC00654-201ENST00000379053 SEPT7Q16181 437 aaKnown RBP12.8□□□□□ -0.36
LINC00654-201ENST00000379053 SPATA32Q96LK8 384 aa12.8□□□□□ -0.36
LINC00654-201ENST00000379053 CCDC196A0A1B0GTZ2 297 aa12.8□□□□□ -0.36
LINC00654-201ENST00000379053 RAB11FIP3O75154 756 aa12.8□□□□□ -0.36
LINC00654-201ENST00000379053 CFAP45Q9UL16 551 aa12.8□□□□□ -0.36
LINC00654-201ENST00000379053 DHX8Q14562 1220 aaKnown RBP12.79□□□□□ -0.36
LINC00654-201ENST00000379053 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.79□□□□□ -0.36
LINC00654-201ENST00000379053 ANKRD18AQ8IVF6 992 aa12.79□□□□□ -0.36
LINC00654-201ENST00000379053 ANKRD24Q8TF21 1146 aa12.79□□□□□ -0.36
LINC00654-201ENST00000379053 ACSBG1Q96GR2 724 aa12.79□□□□□ -0.36
LINC00654-201ENST00000379053 BIN2Q9UBW5 565 aaPredicted RBP12.79□□□□□ -0.36
LINC00654-201ENST00000379053 HLA-DOAP06340 250 aa12.79□□□□□ -0.36
LINC00654-201ENST00000379053 CCDC192P0DO97 292 aa12.79□□□□□ -0.36
LINC00654-201ENST00000379053 ZRSR2Q15696 482 aaKnown RBP12.79□□□□□ -0.36
LINC00654-201ENST00000379053 UBA5Q9GZZ9 404 aa12.79□□□□□ -0.36
LINC00654-201ENST00000379053 DENND4BO75064 1496 aaPredicted RBP12.79□□□□□ -0.36
LINC00654-201ENST00000379053 MAGI1Q96QZ7 1491 aaPredicted RBP12.79□□□□□ -0.36
LINC00654-201ENST00000379053 RFX1P22670 979 aa12.79□□□□□ -0.36
LINC00654-201ENST00000379053 LDHAL6AQ6ZMR3 332 aa12.79□□□□□ -0.36
LINC00654-201ENST00000379053 PKNOX2Q96KN3 472 aa12.79□□□□□ -0.36
LINC00654-201ENST00000379053 RNF41Q9H4P4 317 aaPredicted RBP12.79□□□□□ -0.36
LINC00654-201ENST00000379053 DISP3Q9P2K9 1392 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms