RNA–Protein interactions for RNA: ENST00000378913.6

DCTN3-204, Transcript of dynactin subunit 3, humanhuman

TSL 1 (best) BASIC

Gene DCTN3, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCTN3-204ENST00000378913 SLC15A2Q16348 729 aa13.12□□□□□ -0.31
DCTN3-204ENST00000378913 PHACTR3Q96KR7 559 aa13.12□□□□□ -0.31
DCTN3-204ENST00000378913 STK32BQ9NY57 414 aa13.12□□□□□ -0.31
DCTN3-204ENST00000378913 ASAP1Q9ULH1 1129 aa13.12□□□□□ -0.31
DCTN3-204ENST00000378913 TJP1Q07157 1748 aa13.11□□□□□ -0.31
DCTN3-204ENST00000378913 CABP4P57796 275 aa13.11□□□□□ -0.31
DCTN3-204ENST00000378913 ZNF827Q17R98 1081 aa13.11□□□□□ -0.31
DCTN3-204ENST00000378913 GAS2L2Q8NHY3 880 aa13.11□□□□□ -0.31
DCTN3-204ENST00000378913 MYH14Q7Z406 1995 aaKnown RBP13.11□□□□□ -0.31
DCTN3-204ENST00000378913 RNMTO43148 476 aaKnown RBP13.1□□□□□ -0.31
DCTN3-204ENST00000378913 AKT1S1Q96B36 256 aa13.1□□□□□ -0.31
DCTN3-204ENST00000378913 LGR6Q9HBX8 967 aa13.1□□□□□ -0.31
DCTN3-204ENST00000378913 ATG3Q9NT62 314 aa13.1□□□□□ -0.31
DCTN3-204ENST00000378913 COL24A1Q17RW2 1714 aa13.1□□□□□ -0.31
DCTN3-204ENST00000378913 GNAT3A8MTJ3 354 aa13.09□□□□□ -0.31
DCTN3-204ENST00000378913 NFATC2IPQ8NCF5 419 aa13.09□□□□□ -0.31
DCTN3-204ENST00000378913 SLC52A2Q9HAB3 445 aa13.09□□□□□ -0.31
DCTN3-204ENST00000378913 LOC102724428A0A0B4J2F2 783 aa13.08□□□□□ -0.32
DCTN3-204ENST00000378913 SIK1P57059 783 aa13.08□□□□□ -0.32
DCTN3-204ENST00000378913 PDGFDQ9GZP0 370 aaPredicted RBP13.08□□□□□ -0.32
DCTN3-204ENST00000378913 KCPQ6ZWJ8 1503 aa13.08□□□□□ -0.32
DCTN3-204ENST00000378913 CEMIPQ8WUJ3 1361 aa13.07□□□□□ -0.32
DCTN3-204ENST00000378913 PLEKHF1Q96S99 279 aa13.07□□□□□ -0.32
DCTN3-204ENST00000378913 IL17REQ8NFR9 667 aa13.06□□□□□ -0.32
DCTN3-204ENST00000378913 PNPLA7Q6ZV29 1317 aa13.06□□□□□ -0.32
DCTN3-204ENST00000378913 C4AP0C0L4 1744 aa13.05□□□□□ -0.32
DCTN3-204ENST00000378913 HMGB2P26583 209 aaKnown RBP13.05□□□□□ -0.32
DCTN3-204ENST00000378913 ITPK1Q13572 414 aa13.05□□□□□ -0.32
DCTN3-204ENST00000378913 LINC00116Q8NCU8 138 aa13.05□□□□□ -0.32
DCTN3-204ENST00000378913 SLC4A9Q96Q91 983 aa13.05□□□□□ -0.32
DCTN3-204ENST00000378913 RBM42Q9BTD8 480 aaKnown RBP13.05□□□□□ -0.32
DCTN3-204ENST00000378913 TFCP2L1Q9NZI6 479 aa13.05□□□□□ -0.32
DCTN3-204ENST00000378913 KDM3BQ7LBC6 1761 aa13.04□□□□□ -0.32
DCTN3-204ENST00000378913 NEFMP07197 916 aa13.04□□□□□ -0.32
DCTN3-204ENST00000378913 ATP6V1AP38606 617 aa13.04□□□□□ -0.32
DCTN3-204ENST00000378913 PNNQ9H307 717 aaKnown RBP13.04□□□□□ -0.32
DCTN3-204ENST00000378913 PTCD1O75127 700 aaKnown RBP13.03□□□□□ -0.32
DCTN3-204ENST00000378913 TEFQ10587 303 aa13.03□□□□□ -0.32
DCTN3-204ENST00000378913 SLC39A6Q13433 755 aa13.03□□□□□ -0.32
DCTN3-204ENST00000378913 WDR43Q15061 677 aaKnown RBP eCLIP13.03□□□□□ -0.32
DCTN3-204ENST00000378913 MAPK8IP3Q9UPT6 1336 aa13.03□□□□□ -0.32
DCTN3-204ENST00000378913 HTATSF1O43719 755 aaKnown RBP13.02□□□□□ -0.33
DCTN3-204ENST00000378913 ZBTB7AO95365 584 aa13.02□□□□□ -0.33
DCTN3-204ENST00000378913 NFE2L2Q16236 605 aa13.02□□□□□ -0.33
DCTN3-204ENST00000378913 MCM10Q7L590 875 aa13.02□□□□□ -0.33
DCTN3-204ENST00000378913 RTF1Q92541 710 aaKnown RBP13.02□□□□□ -0.33
DCTN3-204ENST00000378913 AK7Q96M32 723 aa13.02□□□□□ -0.33
DCTN3-204ENST00000378913 SPON1Q9HCB6 807 aa13.02□□□□□ -0.33
DCTN3-204ENST00000378913 ANP32CO43423 234 aa13.01□□□□□ -0.33
DCTN3-204ENST00000378913 AMIGO3Q86WK7 504 aa13.01□□□□□ -0.33
DCTN3-204ENST00000378913 MTFR1LQ9H019 292 aa13.01□□□□□ -0.33
DCTN3-204ENST00000378913 LAMB4A4D0S4 1761 aa13□□□□□ -0.33
DCTN3-204ENST00000378913 CNTNAP4Q9C0A0 1308 aa13□□□□□ -0.33
DCTN3-204ENST00000378913 DCTN1Q14203 1278 aa13□□□□□ -0.33
DCTN3-204ENST00000378913 CCDC184Q52MB2 194 aa13□□□□□ -0.33
DCTN3-204ENST00000378913 COL23A1Q86Y22 540 aaPredicted RBP13□□□□□ -0.33
DCTN3-204ENST00000378913 ADAMTS8Q9UP79 889 aa13□□□□□ -0.33
DCTN3-204ENST00000378913 GNPATO15228 680 aa12.99□□□□□ -0.33
DCTN3-204ENST00000378913 PTGER2P43116 358 aa12.99□□□□□ -0.33
DCTN3-204ENST00000378913 ZNF790Q6PG37 636 aa12.99□□□□□ -0.33
DCTN3-204ENST00000378913 CCDC146Q8IYE0 955 aa12.99□□□□□ -0.33
DCTN3-204ENST00000378913 SLC16A10Q8TF71 515 aa12.99□□□□□ -0.33
DCTN3-204ENST00000378913 ATF5Q9Y2D1 282 aaPredicted RBP12.99□□□□□ -0.33
DCTN3-204ENST00000378913 SSFA2P28290 1259 aa12.98□□□□□ -0.33
DCTN3-204ENST00000378913 RC3H1Q5TC82 1133 aaKnown RBP12.98□□□□□ -0.33
DCTN3-204ENST00000378913 TTC5Q8N0Z6 440 aa12.98□□□□□ -0.33
DCTN3-204ENST00000378913 FLAD1Q8NFF5 587 aa12.98□□□□□ -0.33
DCTN3-204ENST00000378913 RUNDC1Q96C34 613 aa12.98□□□□□ -0.33
DCTN3-204ENST00000378913 SGIP1Q9BQI5 828 aa12.98□□□□□ -0.33
DCTN3-204ENST00000378913 HEG1Q9ULI3 1381 aa12.97□□□□□ -0.33
DCTN3-204ENST00000378913 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.97□□□□□ -0.33
DCTN3-204ENST00000378913 BTBD11A6QL63 1104 aa12.97□□□□□ -0.33
DCTN3-204ENST00000378913 PHF14O94880 888 aa12.97□□□□□ -0.33
DCTN3-204ENST00000378913 TMPOP42166 694 aaKnown RBP12.97□□□□□ -0.33
DCTN3-204ENST00000378913 CRKLP46109 303 aaKnown RBP12.97□□□□□ -0.33
DCTN3-204ENST00000378913 SMIM5Q71RC9 77 aa12.97□□□□□ -0.33
DCTN3-204ENST00000378913 DNAJC10Q8IXB1 793 aa12.97□□□□□ -0.33
DCTN3-204ENST00000378913 VSIG10Q8N0Z9 540 aa12.97□□□□□ -0.33
DCTN3-204ENST00000378913 ZNF496Q96IT1 587 aaPredicted RBP12.97□□□□□ -0.33
DCTN3-204ENST00000378913 MSH5O43196 834 aa12.96□□□□□ -0.33
DCTN3-204ENST00000378913 KCNQ3O43525 872 aa12.96□□□□□ -0.33
DCTN3-204ENST00000378913 RIPK4P57078 832 aa12.96□□□□□ -0.33
DCTN3-204ENST00000378913 THUMPD2Q9BTF0 503 aaKnown RBP12.96□□□□□ -0.33
DCTN3-204ENST00000378913 RPS6KA4O75676 772 aa12.95□□□□□ -0.34
DCTN3-204ENST00000378913 CYP19A1P11511 503 aaPredicted RBP12.95□□□□□ -0.34
DCTN3-204ENST00000378913 TAF7Q15545 349 aaPredicted RBP12.95□□□□□ -0.34
DCTN3-204ENST00000378913 FMNL2Q96PY5 1086 aa12.95□□□□□ -0.34
DCTN3-204ENST00000378913 MRS2Q9HD23 443 aa12.95□□□□□ -0.34
DCTN3-204ENST00000378913 RRP7AQ9Y3A4 280 aaKnown RBP12.95□□□□□ -0.34
DCTN3-204ENST00000378913 RTCBQ9Y3I0 505 aaKnown RBP12.95□□□□□ -0.34
DCTN3-204ENST00000378913 ADRA2BP18089 450 aa12.94□□□□□ -0.34
DCTN3-204ENST00000378913 LMOD3Q0VAK6 560 aa12.94□□□□□ -0.34
DCTN3-204ENST00000378913 INTS5Q6P9B9 1019 aaKnown RBP12.94□□□□□ -0.34
DCTN3-204ENST00000378913 CCDC87Q9NVE4 849 aa12.94□□□□□ -0.34
DCTN3-204ENST00000378913 PPP1R1BQ9UD71 204 aaPredicted RBP12.94□□□□□ -0.34
DCTN3-204ENST00000378913 SCN7AQ01118 1682 aa12.93□□□□□ -0.34
DCTN3-204ENST00000378913 MSL1Q68DK7 614 aa12.93□□□□□ -0.34
DCTN3-204ENST00000378913 PNISRQ8TF01 805 aaKnown RBP12.93□□□□□ -0.34
DCTN3-204ENST00000378913 BCORQ6W2J9 1755 aa12.93□□□□□ -0.34
DCTN3-204ENST00000378913 NEUROD2Q15784 382 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms