RNA–Protein interactions for RNA: ENST00000378549.5

ITM2B-201, Transcript of integral membrane protein 2B, humanhuman

TSL 5 BASIC

Gene ITM2B, Length 805 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-201ENST00000378549 TEFQ10587 303 aa22.75■■□□□ 1.23
ITM2B-201ENST00000378549 NFATC2IPQ8NCF5 419 aa22.75■■□□□ 1.23
ITM2B-201ENST00000378549 SMARCC1Q92922 1105 aaPredicted RBP22.75■■□□□ 1.23
ITM2B-201ENST00000378549 CEMIPQ8WUJ3 1361 aa22.75■■□□□ 1.23
ITM2B-201ENST00000378549 PALLDQ8WX93 1383 aa22.75■■□□□ 1.23
ITM2B-201ENST00000378549 TMPOP42166 694 aaKnown RBP22.74■■□□□ 1.23
ITM2B-201ENST00000378549 IL17REQ8NFR9 667 aa22.74■■□□□ 1.23
ITM2B-201ENST00000378549 RIPK4P57078 832 aa22.73■■□□□ 1.23
ITM2B-201ENST00000378549 LMOD3Q0VAK6 560 aa22.73■■□□□ 1.23
ITM2B-201ENST00000378549 MCM10Q7L590 875 aa22.73■■□□□ 1.23
ITM2B-201ENST00000378549 FAM9BQ8IZU0 186 aa22.73■■□□□ 1.23
ITM2B-201ENST00000378549 C5P01031 1676 aa22.73■■□□□ 1.23
ITM2B-201ENST00000378549 UBR2Q8IWV8 1755 aa22.73■■□□□ 1.23
ITM2B-201ENST00000378549 TXNRD1Q16881 649 aa22.72■■□□□ 1.23
ITM2B-201ENST00000378549 MIER1Q8N108 512 aa22.72■■□□□ 1.23
ITM2B-201ENST00000378549 RRP7AQ9Y3A4 280 aaKnown RBP22.71■■□□□ 1.23
ITM2B-201ENST00000378549 ZNF831Q5JPB2 1677 aa22.71■■□□□ 1.23
ITM2B-201ENST00000378549 DCTN1Q14203 1278 aa22.7■■□□□ 1.22
ITM2B-201ENST00000378549 NEUROD2Q15784 382 aa22.7■■□□□ 1.22
ITM2B-201ENST00000378549 ASAP1Q9ULH1 1129 aa22.7■■□□□ 1.22
ITM2B-201ENST00000378549 APAF1O14727 1248 aa22.69■■□□□ 1.22
ITM2B-201ENST00000378549 SLC27A3Q5K4L6 730 aa22.69■■□□□ 1.22
ITM2B-201ENST00000378549 ATG3Q9NT62 314 aa22.69■■□□□ 1.22
ITM2B-201ENST00000378549 CCNL1Q9UK58 526 aaPredicted RBP22.68■■□□□ 1.22
ITM2B-201ENST00000378549 PROM2Q8N271 834 aa22.67■■□□□ 1.22
ITM2B-201ENST00000378549 KDM3BQ7LBC6 1761 aa22.67■■□□□ 1.22
ITM2B-201ENST00000378549 COL5A3P25940 1745 aaPredicted RBP22.66■■□□□ 1.22
ITM2B-201ENST00000378549 CICQ96RK0 1608 aaPredicted RBP22.66■■□□□ 1.22
ITM2B-201ENST00000378549 TTC5Q8N0Z6 440 aa22.65■■□□□ 1.22
ITM2B-201ENST00000378549 LOC102724428A0A0B4J2F2 783 aa22.64■■□□□ 1.21
ITM2B-201ENST00000378549 HMGB2P26583 209 aaKnown RBP22.64■■□□□ 1.21
ITM2B-201ENST00000378549 SIK1P57059 783 aa22.64■■□□□ 1.21
ITM2B-201ENST00000378549 RBM42Q9BTD8 480 aaKnown RBP22.64■■□□□ 1.21
ITM2B-201ENST00000378549 THUMPD2Q9BTF0 503 aaKnown RBP22.64■■□□□ 1.21
ITM2B-201ENST00000378549 TJP1Q07157 1748 aa22.64■■□□□ 1.21
ITM2B-201ENST00000378549 TUBGCP6Q96RT7 1819 aa22.64■■□□□ 1.21
ITM2B-201ENST00000378549 KCPQ6ZWJ8 1503 aa22.63■■□□□ 1.21
ITM2B-201ENST00000378549 BTBD11A6QL63 1104 aa22.63■■□□□ 1.21
ITM2B-201ENST00000378549 SLC39A6Q13433 755 aa22.63■■□□□ 1.21
ITM2B-201ENST00000378549 NBPF14Q5TI25 921 aa22.63■■□□□ 1.21
ITM2B-201ENST00000378549 LRRC4BQ9NT99 713 aa22.63■■□□□ 1.21
ITM2B-201ENST00000378549 C4BP0C0L5 1744 aa22.62■■□□□ 1.21
ITM2B-201ENST00000378549 PTCD1O75127 700 aaKnown RBP22.62■■□□□ 1.21
ITM2B-201ENST00000378549 TAF7Q15545 349 aaPredicted RBP22.62■■□□□ 1.21
ITM2B-201ENST00000378549 QSER1Q2KHR3 1735 aa22.62■■□□□ 1.21
ITM2B-201ENST00000378549 ATP6V1AP38606 617 aa22.61■■□□□ 1.21
ITM2B-201ENST00000378549 KCNQ4P56696 695 aa22.61■■□□□ 1.21
ITM2B-201ENST00000378549 ZNF790Q6PG37 636 aa22.61■■□□□ 1.21
ITM2B-201ENST00000378549 TRIM35Q9UPQ4 493 aa22.61■■□□□ 1.21
ITM2B-201ENST00000378549 STK32BQ9NY57 414 aa22.59■■□□□ 1.21
ITM2B-201ENST00000378549 UBR3Q6ZT12 1888 aa22.58■■□□□ 1.21
ITM2B-201ENST00000378549 SENP3-EIF4A1A0A087X0R7 540 aa22.57■■□□□ 1.2
ITM2B-201ENST00000378549 CALD1Q05682 793 aaKnown RBP22.57■■□□□ 1.2
ITM2B-201ENST00000378549 ANO8Q9HCE9 1232 aaPredicted RBP22.57■■□□□ 1.2
ITM2B-201ENST00000378549 LAMB4A4D0S4 1761 aa22.57■■□□□ 1.2
ITM2B-201ENST00000378549 MYH14Q7Z406 1995 aaKnown RBP22.57■■□□□ 1.2
ITM2B-201ENST00000378549 FMNL2Q96PY5 1086 aa22.56■■□□□ 1.2
ITM2B-201ENST00000378549 ITPK1Q13572 414 aa22.55■■□□□ 1.2
ITM2B-201ENST00000378549 CCDC27Q2M243 656 aa22.55■■□□□ 1.2
ITM2B-201ENST00000378549 NCBP3Q53F19 620 aaKnown RBP22.55■■□□□ 1.2
ITM2B-201ENST00000378549 SLC4A9Q96Q91 983 aa22.55■■□□□ 1.2
ITM2B-201ENST00000378549 SLC15A2Q16348 729 aa22.54■■□□□ 1.2
ITM2B-201ENST00000378549 VSIG10Q8N0Z9 540 aa22.54■■□□□ 1.2
ITM2B-201ENST00000378549 NGEFQ8N5V2 710 aa22.54■■□□□ 1.2
ITM2B-201ENST00000378549 ZNF496Q96IT1 587 aaPredicted RBP22.54■■□□□ 1.2
ITM2B-201ENST00000378549 MIS18AQ9NYP9 233 aa22.54■■□□□ 1.2
ITM2B-201ENST00000378549 TSPYL4Q9UJ04 414 aa22.54■■□□□ 1.2
ITM2B-201ENST00000378549 HEG1Q9ULI3 1381 aa22.53■■□□□ 1.2
ITM2B-201ENST00000378549 KCNQ3O43525 872 aa22.53■■□□□ 1.2
ITM2B-201ENST00000378549 R3HDM1Q15032 1099 aaKnown RBP22.53■■□□□ 1.2
ITM2B-201ENST00000378549 LINC00116Q8NCU8 138 aa22.53■■□□□ 1.2
ITM2B-201ENST00000378549 BABAM1Q9NWV8 329 aa22.53■■□□□ 1.2
ITM2B-201ENST00000378549 LAS1LQ9Y4W2 734 aaKnown RBP22.53■■□□□ 1.2
ITM2B-201ENST00000378549 ZNF827Q17R98 1081 aa22.52■■□□□ 1.2
ITM2B-201ENST00000378549 AKT1S1Q96B36 256 aa22.52■■□□□ 1.2
ITM2B-201ENST00000378549 AK7Q96M32 723 aa22.52■■□□□ 1.2
ITM2B-201ENST00000378549 SALL2Q9Y467 1007 aaPredicted RBP22.52■■□□□ 1.2
ITM2B-201ENST00000378549 CASZ1Q86V15 1759 aa22.51■■□□□ 1.19
ITM2B-201ENST00000378549 PSDA5PKW4 1024 aaPredicted RBP22.51■■□□□ 1.19
ITM2B-201ENST00000378549 WWC1Q8IX03 1113 aa22.51■■□□□ 1.19
ITM2B-201ENST00000378549 TFCP2L1Q9NZI6 479 aa22.51■■□□□ 1.19
ITM2B-201ENST00000378549 DNAJC10Q8IXB1 793 aa22.5■■□□□ 1.19
ITM2B-201ENST00000378549 CFAP44Q96MT7 982 aa22.49■■□□□ 1.19
ITM2B-201ENST00000378549 TEX13AQ9BXU3 409 aaPredicted RBP22.49■■□□□ 1.19
ITM2B-201ENST00000378549 IFT57Q9NWB7 429 aa22.49■■□□□ 1.19
ITM2B-201ENST00000378549 CNTNAP4Q9C0A0 1308 aa22.49■■□□□ 1.19
ITM2B-201ENST00000378549 GNAI1P63096 354 aa22.48■■□□□ 1.19
ITM2B-201ENST00000378549 CHL1O00533 1208 aa22.47■■□□□ 1.19
ITM2B-201ENST00000378549 GNPATO15228 680 aa22.47■■□□□ 1.19
ITM2B-201ENST00000378549 STARD3NLO95772 234 aa22.47■■□□□ 1.19
ITM2B-201ENST00000378549 SNRPA1P09661 255 aaKnown RBP22.47■■□□□ 1.19
ITM2B-201ENST00000378549 C4AP0C0L4 1744 aa22.47■■□□□ 1.19
ITM2B-201ENST00000378549 CRKLP46109 303 aaKnown RBP22.46■■□□□ 1.19
ITM2B-201ENST00000378549 EIF4A1P60842 406 aaKnown RBP22.46■■□□□ 1.19
ITM2B-201ENST00000378549 RC3H1Q5TC82 1133 aaKnown RBP22.46■■□□□ 1.19
ITM2B-201ENST00000378549 CYP19A1P11511 503 aaPredicted RBP22.45■■□□□ 1.18
ITM2B-201ENST00000378549 IL16Q14005 1332 aa22.45■■□□□ 1.18
ITM2B-201ENST00000378549 ZNF853P0CG23 659 aa22.44■■□□□ 1.18
ITM2B-201ENST00000378549 WDR63Q8IWG1 891 aa22.44■■□□□ 1.18
ITM2B-201ENST00000378549 FLAD1Q8NFF5 587 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms