RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 CCDC178Q5BJE1 867 aa16.49■□□□□ 0.23
TRIM13-202ENST00000378182 CTNNA3Q9UI47 895 aa16.49■□□□□ 0.23
TRIM13-202ENST00000378182 SCAPERQ9BY12 1400 aa16.49■□□□□ 0.23
TRIM13-202ENST00000378182 RBM26Q5T8P6 1007 aaKnown RBP16.49■□□□□ 0.23
TRIM13-202ENST00000378182 FGD5Q6ZNL6 1462 aa16.49■□□□□ 0.23
TRIM13-202ENST00000378182 TAF4BQ92750 862 aa16.48■□□□□ 0.23
TRIM13-202ENST00000378182 WAPLQ7Z5K2 1190 aa16.48■□□□□ 0.23
TRIM13-202ENST00000378182 CWC15Q9P013 229 aaKnown RBP16.48■□□□□ 0.23
TRIM13-202ENST00000378182 TRAK2O60296 914 aa16.48■□□□□ 0.23
TRIM13-202ENST00000378182 USP8P40818 1118 aa16.48■□□□□ 0.23
TRIM13-202ENST00000378182 AEBP1Q8IUX7 1158 aa16.48■□□□□ 0.23
TRIM13-202ENST00000378182 GOLGA6L10A0A0M3HER8 536 aa16.48■□□□□ 0.23
TRIM13-202ENST00000378182 GRIPAP1Q4V328 841 aa16.48■□□□□ 0.23
TRIM13-202ENST00000378182 SLC5A1P13866 664 aa16.47■□□□□ 0.23
TRIM13-202ENST00000378182 CKAP2LQ8IYA6 745 aa16.47■□□□□ 0.23
TRIM13-202ENST00000378182 TXLNBQ8N3L3 684 aa16.47■□□□□ 0.23
TRIM13-202ENST00000378182 TSG101Q99816 390 aa16.47■□□□□ 0.23
TRIM13-202ENST00000378182 BIN2Q9UBW5 565 aaPredicted RBP16.47■□□□□ 0.23
TRIM13-202ENST00000378182 POGZQ7Z3K3 1410 aa16.47■□□□□ 0.23
TRIM13-202ENST00000378182 MYO1BO43795 1136 aa16.47■□□□□ 0.23
TRIM13-202ENST00000378182 RBM10P98175 930 aaKnown RBP16.47■□□□□ 0.23
TRIM13-202ENST00000378182 CUX1P39880 1505 aa16.47■□□□□ 0.23
TRIM13-202ENST00000378182 CCDC192P0DO97 292 aa16.47■□□□□ 0.23
TRIM13-202ENST00000378182 CTNNA2P26232 953 aa16.47■□□□□ 0.23
TRIM13-202ENST00000378182 IFIT5Q13325 482 aaKnown RBP16.47■□□□□ 0.23
TRIM13-202ENST00000378182 CEP131Q9UPN4 1083 aa16.47■□□□□ 0.23
TRIM13-202ENST00000378182 SMARCA5O60264 1052 aaPredicted RBP16.46■□□□□ 0.23
TRIM13-202ENST00000378182 BCCIPQ9P287 314 aaKnown RBP eCLIP16.46■□□□□ 0.23
TRIM13-202ENST00000378182 NBPF1Q3BBV0 1214 aa16.46■□□□□ 0.23
TRIM13-202ENST00000378182 BICD1Q96G01 975 aa16.46■□□□□ 0.23
TRIM13-202ENST00000378182 EXOC5O00471 708 aa16.46■□□□□ 0.23
TRIM13-202ENST00000378182 EPB41L2O43491 1005 aaKnown RBP16.46■□□□□ 0.23
TRIM13-202ENST00000378182 ST5P78524 1137 aa16.46■□□□□ 0.23
TRIM13-202ENST00000378182 WASF1Q92558 559 aa16.46■□□□□ 0.23
TRIM13-202ENST00000378182 ERBINQ96RT1 1412 aa16.46■□□□□ 0.23
TRIM13-202ENST00000378182 KIAA0754O94854 1291 aa16.46■□□□□ 0.23
TRIM13-202ENST00000378182 EHMT1Q9H9B1 1298 aa16.46■□□□□ 0.23
TRIM13-202ENST00000378182 AKAP2Q9Y2D5 859 aa16.46■□□□□ 0.23
TRIM13-202ENST00000378182 ANKRD50Q9ULJ7 1429 aa16.46■□□□□ 0.23
TRIM13-202ENST00000378182 UBE4AQ14139 1066 aa16.46■□□□□ 0.22
TRIM13-202ENST00000378182 CACNA2D4Q7Z3S7 1137 aa16.46■□□□□ 0.22
TRIM13-202ENST00000378182 KRT85P78386 507 aa16.45■□□□□ 0.22
TRIM13-202ENST00000378182 GCC1Q96CN9 775 aa16.45■□□□□ 0.22
TRIM13-202ENST00000378182 PRG4Q92954 1404 aaPredicted RBP16.45■□□□□ 0.22
TRIM13-202ENST00000378182 CCDC91Q7Z6B0 441 aa16.45■□□□□ 0.22
TRIM13-202ENST00000378182 DYDC1Q8WWB3 177 aa16.45■□□□□ 0.22
TRIM13-202ENST00000378182 C8orf37Q96NL8 207 aa16.45■□□□□ 0.22
TRIM13-202ENST00000378182 FOXO3O43524 673 aa16.45■□□□□ 0.22
TRIM13-202ENST00000378182 NLRP5P59047 1200 aa16.45■□□□□ 0.22
TRIM13-202ENST00000378182 JARID2Q92833 1246 aaPredicted RBP16.45■□□□□ 0.22
TRIM13-202ENST00000378182 SYCP3Q8IZU3 236 aa16.45■□□□□ 0.22
TRIM13-202ENST00000378182 CBFA2T2O43439 604 aa16.44■□□□□ 0.22
TRIM13-202ENST00000378182 MCM2P49736 904 aa16.44■□□□□ 0.22
TRIM13-202ENST00000378182 RABEP1Q15276 862 aa16.44■□□□□ 0.22
TRIM13-202ENST00000378182 CETN2P41208 172 aa16.44■□□□□ 0.22
TRIM13-202ENST00000378182 EXOC6BQ9Y2D4 811 aa16.44■□□□□ 0.22
TRIM13-202ENST00000378182 PABPN1LA6NDY0 278 aaKnown RBP16.44■□□□□ 0.22
TRIM13-202ENST00000378182 GSTTP1A0A1W2PQM5 241 aa16.44■□□□□ 0.22
TRIM13-202ENST00000378182 LARP1Q6PKG0 1096 aaKnown RBP16.44■□□□□ 0.22
TRIM13-202ENST00000378182 NUDT16Q96DE0 195 aaKnown RBP16.43■□□□□ 0.22
TRIM13-202ENST00000378182 ZBTB3Q9H5J0 574 aa16.43■□□□□ 0.22
TRIM13-202ENST00000378182 DPH6Q7L8W6 267 aa16.43■□□□□ 0.22
TRIM13-202ENST00000378182 THUMPD2Q9BTF0 503 aaKnown RBP16.43■□□□□ 0.22
TRIM13-202ENST00000378182 KIF20AO95235 890 aa16.43■□□□□ 0.22
TRIM13-202ENST00000378182 DDX46Q7L014 1031 aaKnown RBP16.43■□□□□ 0.22
TRIM13-202ENST00000378182 CCDC8Q9H0W5 538 aaPredicted RBP16.43■□□□□ 0.22
TRIM13-202ENST00000378182 CCDC7Q96M83 1385 aa16.43■□□□□ 0.22
TRIM13-202ENST00000378182 LMAN1P49257 510 aa16.43■□□□□ 0.22
TRIM13-202ENST00000378182 LARP6Q9BRS8 491 aaKnown RBP16.43■□□□□ 0.22
TRIM13-202ENST00000378182 ZMYND15Q9H091 742 aa16.43■□□□□ 0.22
TRIM13-202ENST00000378182 SMARCA4P51532 1647 aa16.43■□□□□ 0.22
TRIM13-202ENST00000378182 MAP3K12Q12852 859 aa16.42■□□□□ 0.22
TRIM13-202ENST00000378182 SLF2Q8IX21 1173 aa16.42■□□□□ 0.22
TRIM13-202ENST00000378182 SERPINA10Q9UK55 444 aa16.42■□□□□ 0.22
TRIM13-202ENST00000378182 ARL1P40616 181 aaPredicted RBP16.42■□□□□ 0.22
TRIM13-202ENST00000378182 MAP2K1Q02750 393 aaPredicted RBP16.42■□□□□ 0.22
TRIM13-202ENST00000378182 ANKRD18BA2A2Z9 1011 aa16.42■□□□□ 0.22
TRIM13-202ENST00000378182 NF2P35240 595 aa16.42■□□□□ 0.22
TRIM13-202ENST00000378182 CFAP100Q494V2 611 aa16.42■□□□□ 0.22
TRIM13-202ENST00000378182 SLC12A7Q9Y666 1083 aa16.42■□□□□ 0.22
TRIM13-202ENST00000378182 SYNJ2O15056 1496 aa16.41■□□□□ 0.22
TRIM13-202ENST00000378182 UPF3BQ9BZI7 483 aaKnown RBP16.41■□□□□ 0.22
TRIM13-202ENST00000378182 TMEM266Q2M3C6 531 aa16.41■□□□□ 0.22
TRIM13-202ENST00000378182 FILIP1Q7Z7B0 1213 aa16.41■□□□□ 0.22
TRIM13-202ENST00000378182 RAB11FIP4Q86YS3 637 aa16.41■□□□□ 0.22
TRIM13-202ENST00000378182 CTCFLQ8NI51 663 aaPredicted RBP16.41■□□□□ 0.22
TRIM13-202ENST00000378182 CABP5Q9NP86 173 aa16.41■□□□□ 0.22
TRIM13-202ENST00000378182 CFAP45Q9UL16 551 aa16.41■□□□□ 0.22
TRIM13-202ENST00000378182 PICALMQ13492 652 aa16.41■□□□□ 0.22
TRIM13-202ENST00000378182 CCDC83Q8IWF9 413 aa16.41■□□□□ 0.22
TRIM13-202ENST00000378182 CCDC102AQ96A19 550 aa16.41■□□□□ 0.22
TRIM13-202ENST00000378182 UBAP1LF5GYI3 381 aa16.4■□□□□ 0.22
TRIM13-202ENST00000378182 PPFIA3O75145 1194 aa16.4■□□□□ 0.22
TRIM13-202ENST00000378182 CEBPAP49715 358 aaPredicted RBP16.4■□□□□ 0.22
TRIM13-202ENST00000378182 TERF1P54274 439 aa16.4■□□□□ 0.22
TRIM13-202ENST00000378182 SSRP1Q08945 709 aaKnown RBP16.4■□□□□ 0.22
TRIM13-202ENST00000378182 GOLGA6L7A0A1B0GV03 622 aa16.4■□□□□ 0.22
TRIM13-202ENST00000378182 IQCA1Q86XH1 822 aa16.4■□□□□ 0.22
TRIM13-202ENST00000378182 KCNH5Q8NCM2 988 aa16.4■□□□□ 0.22
TRIM13-202ENST00000378182 CCT2P78371 535 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms