RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 RGS17Q9UGC6 210 aaPredicted RBP16.82■□□□□ 0.28
CBWD3-203ENST00000377344 ADAMTS7Q9UKP4 1686 aa16.81■□□□□ 0.28
CBWD3-203ENST00000377344 NFATC2IPQ8NCF5 419 aa16.81■□□□□ 0.28
CBWD3-203ENST00000377344 BTBD11A6QL63 1104 aa16.8■□□□□ 0.28
CBWD3-203ENST00000377344 CHL1O00533 1208 aa16.8■□□□□ 0.28
CBWD3-203ENST00000377344 ERVV-2B6SEH9 535 aa16.79■□□□□ 0.28
CBWD3-203ENST00000377344 POTEAQ6S8J7 498 aa16.79■□□□□ 0.28
CBWD3-203ENST00000377344 SYTL4Q96C24 671 aaPredicted RBP16.79■□□□□ 0.28
CBWD3-203ENST00000377344 EXOSC9Q06265 439 aaKnown RBP16.78■□□□□ 0.28
CBWD3-203ENST00000377344 FAM182BQ5T319 152 aa16.77■□□□□ 0.28
CBWD3-203ENST00000377344 TMOD3Q9NYL9 352 aa16.77■□□□□ 0.28
CBWD3-203ENST00000377344 ACSBG1Q96GR2 724 aa16.77■□□□□ 0.27
CBWD3-203ENST00000377344 BABAM1Q9NWV8 329 aa16.77■□□□□ 0.27
CBWD3-203ENST00000377344 TOGARAM1Q9Y4F4 1720 aa16.77■□□□□ 0.27
CBWD3-203ENST00000377344 MRC1P22897 1456 aa16.76■□□□□ 0.27
CBWD3-203ENST00000377344 SIPA1L3O60292 1781 aaPredicted RBP16.76■□□□□ 0.27
CBWD3-203ENST00000377344 ELL2O00472 640 aaPredicted RBP16.75■□□□□ 0.27
CBWD3-203ENST00000377344 PRIM1P49642 420 aaKnown RBP16.75■□□□□ 0.27
CBWD3-203ENST00000377344 DOT1LQ8TEK3 1739 aa16.75■□□□□ 0.27
CBWD3-203ENST00000377344 KAT6BQ8WYB5 2073 aa16.75■□□□□ 0.27
CBWD3-203ENST00000377344 SLC39A6Q13433 755 aa16.75■□□□□ 0.27
CBWD3-203ENST00000377344 KRT27Q7Z3Y8 459 aa16.75■□□□□ 0.27
CBWD3-203ENST00000377344 TTC5Q8N0Z6 440 aa16.75■□□□□ 0.27
CBWD3-203ENST00000377344 KCNQ3O43525 872 aa16.74■□□□□ 0.27
CBWD3-203ENST00000377344 KRT24Q2M2I5 525 aa16.73■□□□□ 0.27
CBWD3-203ENST00000377344 ZNF790Q6PG37 636 aa16.73■□□□□ 0.27
CBWD3-203ENST00000377344 PIGBQ92521 554 aa16.73■□□□□ 0.27
CBWD3-203ENST00000377344 BRWD3Q6RI45 1802 aa16.73■□□□□ 0.27
CBWD3-203ENST00000377344 ITGB4P16144 1822 aa16.73■□□□□ 0.27
CBWD3-203ENST00000377344 KDM3BQ7LBC6 1761 aa16.73■□□□□ 0.27
CBWD3-203ENST00000377344 C8orf58Q8NAV2 365 aa16.73■□□□□ 0.27
CBWD3-203ENST00000377344 TWISTNBQ3B726 338 aaPredicted RBP16.72■□□□□ 0.27
CBWD3-203ENST00000377344 TSPYL6Q8N831 410 aa16.72■□□□□ 0.27
CBWD3-203ENST00000377344 RCAN3Q9UKA8 241 aa16.72■□□□□ 0.27
CBWD3-203ENST00000377344 RGS12O14924 1447 aa16.71■□□□□ 0.27
CBWD3-203ENST00000377344 EIF4A1P60842 406 aaKnown RBP16.71■□□□□ 0.27
CBWD3-203ENST00000377344 BCL9O00512 1426 aa16.71■□□□□ 0.27
CBWD3-203ENST00000377344 KCNQ2O43526 872 aa16.7■□□□□ 0.26
CBWD3-203ENST00000377344 CT47B1P0C2W7 299 aaPredicted RBP16.69■□□□□ 0.26
CBWD3-203ENST00000377344 ASAP1Q9ULH1 1129 aa16.69■□□□□ 0.26
CBWD3-203ENST00000377344 PTCD1O75127 700 aaKnown RBP16.68■□□□□ 0.26
CBWD3-203ENST00000377344 FAM196AQ6ZSG2 479 aa16.68■□□□□ 0.26
CBWD3-203ENST00000377344 ZNF496Q96IT1 587 aaPredicted RBP16.68■□□□□ 0.26
CBWD3-203ENST00000377344 VAMP4O75379 141 aa16.68■□□□□ 0.26
CBWD3-203ENST00000377344 FMNL2Q96PY5 1086 aa16.68■□□□□ 0.26
CBWD3-203ENST00000377344 BCL2L13Q9BXK5 485 aa16.67■□□□□ 0.26
CBWD3-203ENST00000377344 ATG3Q9NT62 314 aa16.67■□□□□ 0.26
CBWD3-203ENST00000377344 SUPT16HQ9Y5B9 1047 aaKnown RBP16.67■□□□□ 0.26
CBWD3-203ENST00000377344 RBM42Q9BTD8 480 aaKnown RBP16.66■□□□□ 0.26
CBWD3-203ENST00000377344 PAPPAQ13219 1627 aa16.66■□□□□ 0.26
CBWD3-203ENST00000377344 TCERG1O14776 1098 aaKnown RBP16.66■□□□□ 0.26
CBWD3-203ENST00000377344 RARSP54136 660 aaKnown RBP16.66■□□□□ 0.26
CBWD3-203ENST00000377344 NECTIN2Q92692 538 aa16.66■□□□□ 0.26
CBWD3-203ENST00000377344 GIGYF1O75420 1035 aaPredicted RBP16.65■□□□□ 0.26
CBWD3-203ENST00000377344 BCAR3O75815 825 aa16.65■□□□□ 0.26
CBWD3-203ENST00000377344 EIF2S2P20042 333 aaKnown RBP16.65■□□□□ 0.26
CBWD3-203ENST00000377344 PTF1AQ7RTS3 328 aa16.65■□□□□ 0.26
CBWD3-203ENST00000377344 SMC4Q9NTJ3 1288 aa16.65■□□□□ 0.26
CBWD3-203ENST00000377344 NHSQ6T4R5 1651 aa16.65■□□□□ 0.26
CBWD3-203ENST00000377344 PRAMEF22A3QJZ6 481 aa16.64■□□□□ 0.25
CBWD3-203ENST00000377344 ZNF428Q96B54 188 aa16.64■□□□□ 0.25
CBWD3-203ENST00000377344 KCPQ6ZWJ8 1503 aa16.64■□□□□ 0.25
CBWD3-203ENST00000377344 SNRPA1P09661 255 aaKnown RBP16.63■□□□□ 0.25
CBWD3-203ENST00000377344 HDGFL1Q5TGJ6 251 aa16.63■□□□□ 0.25
CBWD3-203ENST00000377344 SSH1Q8WYL5 1049 aa16.63■□□□□ 0.25
CBWD3-203ENST00000377344 SBF2Q86WG5 1849 aa16.63■□□□□ 0.25
CBWD3-203ENST00000377344 SOS1Q07889 1333 aaPredicted RBP16.63■□□□□ 0.25
CBWD3-203ENST00000377344 UBR2Q8IWV8 1755 aa16.63■□□□□ 0.25
CBWD3-203ENST00000377344 HEG1Q9ULI3 1381 aa16.63■□□□□ 0.25
CBWD3-203ENST00000377344 TRIM37O94972 964 aa16.63■□□□□ 0.25
CBWD3-203ENST00000377344 HOXB7P09629 217 aa16.63■□□□□ 0.25
CBWD3-203ENST00000377344 EP400Q96L91 3159 aa16.62■□□□□ 0.25
CBWD3-203ENST00000377344 ALDH1L2Q3SY69 923 aa16.62■□□□□ 0.25
CBWD3-203ENST00000377344 CCDC30Q5VVM6 783 aa16.62■□□□□ 0.25
CBWD3-203ENST00000377344 SMARCC1Q92922 1105 aaPredicted RBP16.62■□□□□ 0.25
CBWD3-203ENST00000377344 BCL11BQ9C0K0 894 aaPredicted RBP16.62■□□□□ 0.25
CBWD3-203ENST00000377344 PALLDQ8WX93 1383 aa16.62■□□□□ 0.25
CBWD3-203ENST00000377344 STK31Q9BXU1 1019 aa16.61■□□□□ 0.25
CBWD3-203ENST00000377344 BTAF1O14981 1849 aa16.61■□□□□ 0.25
CBWD3-203ENST00000377344 CANXP27824 592 aaKnown RBP16.61■□□□□ 0.25
CBWD3-203ENST00000377344 FRAT1Q92837 279 aaPredicted RBP16.61■□□□□ 0.25
CBWD3-203ENST00000377344 CHMP4AQ9BY43 222 aa16.61■□□□□ 0.25
CBWD3-203ENST00000377344 C5P01031 1676 aa16.6■□□□□ 0.25
CBWD3-203ENST00000377344 USP16Q9Y5T5 823 aa16.6■□□□□ 0.25
CBWD3-203ENST00000377344 SLC4A2P04920 1241 aa16.59■□□□□ 0.25
CBWD3-203ENST00000377344 VSIG10Q8N0Z9 540 aa16.59■□□□□ 0.25
CBWD3-203ENST00000377344 PLIN1O60240 522 aa16.59■□□□□ 0.25
CBWD3-203ENST00000377344 RRP1P56182 461 aaKnown RBP16.59■□□□□ 0.25
CBWD3-203ENST00000377344 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.59■□□□□ 0.25
CBWD3-203ENST00000377344 LOC102724428A0A0B4J2F2 783 aa16.58■□□□□ 0.24
CBWD3-203ENST00000377344 ATP6V1AP38606 617 aa16.58■□□□□ 0.24
CBWD3-203ENST00000377344 SIK1P57059 783 aa16.58■□□□□ 0.24
CBWD3-203ENST00000377344 MRPL50Q8N5N7 158 aaKnown RBP16.58■□□□□ 0.24
CBWD3-203ENST00000377344 DNAJC10Q8IXB1 793 aa16.57■□□□□ 0.24
CBWD3-203ENST00000377344 SLC4A9Q96Q91 983 aa16.57■□□□□ 0.24
CBWD3-203ENST00000377344 TEX13AQ9BXU3 409 aaPredicted RBP16.57■□□□□ 0.24
CBWD3-203ENST00000377344 CHPF2Q9P2E5 772 aa16.57■□□□□ 0.24
CBWD3-203ENST00000377344 KIF16BQ96L93 1317 aa16.56■□□□□ 0.24
CBWD3-203ENST00000377344 DBF4Q9UBU7 674 aaPredicted RBP16.56■□□□□ 0.24
CBWD3-203ENST00000377344 NOB1Q9ULX3 412 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms