RNA–Protein interactions for RNA: ENST00000377017.5

TIMP1-202, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2 BASIC

Gene TIMP1, Length 626 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-202ENST00000377017 IL16Q14005 1332 aa17.19■□□□□ 0.34
TIMP1-202ENST00000377017 ZBED9Q6R2W3 1325 aa17.19■□□□□ 0.34
TIMP1-202ENST00000377017 BABAM1Q9NWV8 329 aa17.18■□□□□ 0.34
TIMP1-202ENST00000377017 BTAF1O14981 1849 aa17.17■□□□□ 0.34
TIMP1-202ENST00000377017 BTBD11A6QL63 1104 aa17.17■□□□□ 0.34
TIMP1-202ENST00000377017 TRIM37O94972 964 aa17.17■□□□□ 0.34
TIMP1-202ENST00000377017 GNAI1P63096 354 aa17.17■□□□□ 0.34
TIMP1-202ENST00000377017 PIGBQ92521 554 aa17.17■□□□□ 0.34
TIMP1-202ENST00000377017 IFT57Q9NWB7 429 aa17.17■□□□□ 0.34
TIMP1-202ENST00000377017 ZNF521Q96K83 1311 aa17.17■□□□□ 0.34
TIMP1-202ENST00000377017 KCNQ2O43526 872 aa17.16■□□□□ 0.34
TIMP1-202ENST00000377017 TTC5Q8N0Z6 440 aa17.16■□□□□ 0.34
TIMP1-202ENST00000377017 CFAP44Q96MT7 982 aa17.16■□□□□ 0.34
TIMP1-202ENST00000377017 LAS1LQ9Y4W2 734 aaKnown RBP17.16■□□□□ 0.34
TIMP1-202ENST00000377017 PAPPAQ13219 1627 aa17.15■□□□□ 0.34
TIMP1-202ENST00000377017 GOLGA2Q08379 1002 aa17.15■□□□□ 0.34
TIMP1-202ENST00000377017 SF3B2Q13435 895 aaKnown RBP17.15■□□□□ 0.34
TIMP1-202ENST00000377017 SMARCC1Q92922 1105 aaPredicted RBP17.15■□□□□ 0.34
TIMP1-202ENST00000377017 YTHDC1Q96MU7 727 aaKnown RBP17.15■□□□□ 0.34
TIMP1-202ENST00000377017 TSPYL4Q9UJ04 414 aa17.15■□□□□ 0.34
TIMP1-202ENST00000377017 TNS1Q9HBL0 1735 aaKnown RBP17.14■□□□□ 0.33
TIMP1-202ENST00000377017 KDM3BQ7LBC6 1761 aa17.14■□□□□ 0.33
TIMP1-202ENST00000377017 CCDC125Q86Z20 511 aa17.13■□□□□ 0.33
TIMP1-202ENST00000377017 MYH16Q9H6N6 1097 aa17.13■□□□□ 0.33
TIMP1-202ENST00000377017 E9PSI1 815 aa17.12■□□□□ 0.33
TIMP1-202ENST00000377017 CHL1O00533 1208 aa17.12■□□□□ 0.33
TIMP1-202ENST00000377017 ZNF790Q6PG37 636 aa17.12■□□□□ 0.33
TIMP1-202ENST00000377017 UBR2Q8IWV8 1755 aa17.11■□□□□ 0.33
TIMP1-202ENST00000377017 ZNF853P0CG23 659 aa17.11■□□□□ 0.33
TIMP1-202ENST00000377017 ATG3Q9NT62 314 aa17.11■□□□□ 0.33
TIMP1-202ENST00000377017 PALLDQ8WX93 1383 aa17.11■□□□□ 0.33
TIMP1-202ENST00000377017 RGPD3A6NKT7 1758 aaPredicted RBP17.1■□□□□ 0.33
TIMP1-202ENST00000377017 RGPD4Q7Z3J3 1758 aa17.1■□□□□ 0.33
TIMP1-202ENST00000377017 APBA3O96018 575 aa17.1■□□□□ 0.33
TIMP1-202ENST00000377017 SLC39A6Q13433 755 aa17.1■□□□□ 0.33
TIMP1-202ENST00000377017 MBIPQ9NS73 344 aa17.1■□□□□ 0.33
TIMP1-202ENST00000377017 MIS18AQ9NYP9 233 aa17.1■□□□□ 0.33
TIMP1-202ENST00000377017 ASAP1Q9ULH1 1129 aa17.1■□□□□ 0.33
TIMP1-202ENST00000377017 ILDR2Q71H61 639 aa17.09■□□□□ 0.33
TIMP1-202ENST00000377017 PTF1AQ7RTS3 328 aa17.09■□□□□ 0.33
TIMP1-202ENST00000377017 FMNL2Q96PY5 1086 aa17.09■□□□□ 0.33
TIMP1-202ENST00000377017 LY75O60449 1722 aa17.08■□□□□ 0.32
TIMP1-202ENST00000377017 PLSCR1O15162 318 aa17.08■□□□□ 0.32
TIMP1-202ENST00000377017 HMGB2P26583 209 aaKnown RBP17.08■□□□□ 0.32
TIMP1-202ENST00000377017 BAG6P46379 1132 aa17.08■□□□□ 0.32
TIMP1-202ENST00000377017 SLFN5Q08AF3 891 aa17.08■□□□□ 0.32
TIMP1-202ENST00000377017 RBM42Q9BTD8 480 aaKnown RBP17.08■□□□□ 0.32
TIMP1-202ENST00000377017 KCPQ6ZWJ8 1503 aa17.07■□□□□ 0.32
TIMP1-202ENST00000377017 FANCIQ9NVI1 1328 aa17.07■□□□□ 0.32
TIMP1-202ENST00000377017 TSR2Q969E8 191 aaKnown RBP17.07■□□□□ 0.32
TIMP1-202ENST00000377017 ZNF831Q5JPB2 1677 aa17.07■□□□□ 0.32
TIMP1-202ENST00000377017 PTCD1O75127 700 aaKnown RBP17.06■□□□□ 0.32
TIMP1-202ENST00000377017 EIF4A1P60842 406 aaKnown RBP17.06■□□□□ 0.32
TIMP1-202ENST00000377017 VSIG10Q8N0Z9 540 aa17.06■□□□□ 0.32
TIMP1-202ENST00000377017 EP400Q96L91 3159 aa17.06■□□□□ 0.32
TIMP1-202ENST00000377017 HEG1Q9ULI3 1381 aa17.05■□□□□ 0.32
TIMP1-202ENST00000377017 LOC102724428A0A0B4J2F2 783 aa17.05■□□□□ 0.32
TIMP1-202ENST00000377017 KCNQ3O43525 872 aa17.05■□□□□ 0.32
TIMP1-202ENST00000377017 SIK1P57059 783 aa17.05■□□□□ 0.32
TIMP1-202ENST00000377017 CDCA7LQ96GN5 454 aa17.05■□□□□ 0.32
TIMP1-202ENST00000377017 ZNF496Q96IT1 587 aaPredicted RBP17.05■□□□□ 0.32
TIMP1-202ENST00000377017 SPINK5Q9NQ38 1064 aaPredicted RBP17.05■□□□□ 0.32
TIMP1-202ENST00000377017 CICQ96RK0 1608 aaPredicted RBP17.04■□□□□ 0.32
TIMP1-202ENST00000377017 SLC27A3Q5K4L6 730 aa17.04■□□□□ 0.32
TIMP1-202ENST00000377017 UPF1Q92900 1129 aaKnown RBP eCLIP17.04■□□□□ 0.32
TIMP1-202ENST00000377017 TEX13AQ9BXU3 409 aaPredicted RBP17.04■□□□□ 0.32
TIMP1-202ENST00000377017 CCNL1Q9UK58 526 aaPredicted RBP17.04■□□□□ 0.32
TIMP1-202ENST00000377017 SOS1Q07889 1333 aaPredicted RBP17.03■□□□□ 0.32
TIMP1-202ENST00000377017 HOXB7P09629 217 aa17.03■□□□□ 0.32
TIMP1-202ENST00000377017 SNRPA1P09661 255 aaKnown RBP17.03■□□□□ 0.32
TIMP1-202ENST00000377017 ATP6V1AP38606 617 aa17.03■□□□□ 0.32
TIMP1-202ENST00000377017 CHMP4AQ9BY43 222 aa17.03■□□□□ 0.32
TIMP1-202ENST00000377017 LAMB4A4D0S4 1761 aa17.02■□□□□ 0.32
TIMP1-202ENST00000377017 TRMT2AQ8IZ69 625 aaKnown RBP17.02■□□□□ 0.32
TIMP1-202ENST00000377017 GIGYF1O75420 1035 aaPredicted RBP17.01■□□□□ 0.31
TIMP1-202ENST00000377017 TXNRD1Q16881 649 aa17.01■□□□□ 0.31
TIMP1-202ENST00000377017 DUSP27Q5VZP5 1158 aa17.01■□□□□ 0.31
TIMP1-202ENST00000377017 TJP1Q07157 1748 aa17.01■□□□□ 0.31
TIMP1-202ENST00000377017 C5P01031 1676 aa17.01■□□□□ 0.31
TIMP1-202ENST00000377017 STARD3NLO95772 234 aa17■□□□□ 0.31
TIMP1-202ENST00000377017 EN1Q05925 392 aaPredicted RBP17■□□□□ 0.31
TIMP1-202ENST00000377017 EXOSC9Q06265 439 aaKnown RBP17■□□□□ 0.31
TIMP1-202ENST00000377017 TAF1LQ8IZX4 1826 aa16.99■□□□□ 0.31
TIMP1-202ENST00000377017 TWISTNBQ3B726 338 aaPredicted RBP16.99■□□□□ 0.31
TIMP1-202ENST00000377017 CAMKK2Q96RR4 588 aa16.99■□□□□ 0.31
TIMP1-202ENST00000377017 RREB1Q92766 1687 aa16.99■□□□□ 0.31
TIMP1-202ENST00000377017 COL5A3P25940 1745 aaPredicted RBP16.99■□□□□ 0.31
TIMP1-202ENST00000377017 CT47B1P0C2W7 299 aaPredicted RBP16.98■□□□□ 0.31
TIMP1-202ENST00000377017 EZH2Q15910 746 aaKnown RBP16.98■□□□□ 0.31
TIMP1-202ENST00000377017 DEFB132Q7Z7B7 95 aa16.98■□□□□ 0.31
TIMP1-202ENST00000377017 DNAJC10Q8IXB1 793 aa16.98■□□□□ 0.31
TIMP1-202ENST00000377017 C8orf58Q8NAV2 365 aa16.98■□□□□ 0.31
TIMP1-202ENST00000377017 SLC4A9Q96Q91 983 aa16.98■□□□□ 0.31
TIMP1-202ENST00000377017 ELL2O00472 640 aaPredicted RBP16.97■□□□□ 0.31
TIMP1-202ENST00000377017 KRT24Q2M2I5 525 aa16.97■□□□□ 0.31
TIMP1-202ENST00000377017 ITPK1Q13572 414 aa16.96■□□□□ 0.31
TIMP1-202ENST00000377017 HDGFL1Q5TGJ6 251 aa16.96■□□□□ 0.31
TIMP1-202ENST00000377017 TSPYL6Q8N831 410 aa16.96■□□□□ 0.31
TIMP1-202ENST00000377017 ZNF428Q96B54 188 aa16.96■□□□□ 0.31
TIMP1-202ENST00000377017 C4BP0C0L5 1744 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms