RNA–Protein interactions for RNA: ENST00000376909.6

SSX9-201, Transcript of Protein SSX9, humanhuman

BASIC

Gene SSX9, Length 591 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-201ENST00000376909 LMO7Q8WWI1 1683 aa10.11□□□□□ -0.79
SSX9-201ENST00000376909 DCTN1Q14203 1278 aa10.1□□□□□ -0.79
SSX9-201ENST00000376909 ZNF530Q6P9A1 599 aaPredicted RBP10.1□□□□□ -0.79
SSX9-201ENST00000376909 THUMPD2Q9BTF0 503 aaKnown RBP10.1□□□□□ -0.79
SSX9-201ENST00000376909 IFT57Q9NWB7 429 aa10.1□□□□□ -0.79
SSX9-201ENST00000376909 METRNQ9UJH8 293 aa10.1□□□□□ -0.79
SSX9-201ENST00000376909 SUPT16HQ9Y5B9 1047 aaKnown RBP10.1□□□□□ -0.79
SSX9-201ENST00000376909 MAP3K5Q99683 1374 aa10.1□□□□□ -0.79
SSX9-201ENST00000376909 SPATA31A6Q5VVP1 1343 aa10.09□□□□□ -0.79
SSX9-201ENST00000376909 COL14A1Q05707 1796 aaKnown RBP10.09□□□□□ -0.79
SSX9-201ENST00000376909 GNAI1P63096 354 aa10.09□□□□□ -0.79
SSX9-201ENST00000376909 AKAP4Q5JQC9 854 aa10.09□□□□□ -0.79
SSX9-201ENST00000376909 C1orf141Q5JVX7 400 aa10.09□□□□□ -0.79
SSX9-201ENST00000376909 MCM10Q7L590 875 aa10.09□□□□□ -0.79
SSX9-201ENST00000376909 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.09□□□□□ -0.79
SSX9-201ENST00000376909 RCAN3Q9UKA8 241 aa10.09□□□□□ -0.79
SSX9-201ENST00000376909 SPG7Q9UQ90 795 aa10.09□□□□□ -0.79
SSX9-201ENST00000376909 LAS1LQ9Y4W2 734 aaKnown RBP10.09□□□□□ -0.79
SSX9-201ENST00000376909 PLEKHG2Q9H7P9 1386 aa10.09□□□□□ -0.79
SSX9-201ENST00000376909 FAM208AQ9UK61 1670 aaKnown RBP10.09□□□□□ -0.79
SSX9-201ENST00000376909 CRB1P82279 1406 aa10.08□□□□□ -0.8
SSX9-201ENST00000376909 ZNF853P0CG23 659 aa10.08□□□□□ -0.8
SSX9-201ENST00000376909 PSEN1P49768 467 aa10.08□□□□□ -0.8
SSX9-201ENST00000376909 CFAP44Q96MT7 982 aa10.08□□□□□ -0.8
SSX9-201ENST00000376909 TAOK2Q9UL54 1235 aa10.08□□□□□ -0.8
SSX9-201ENST00000376909 RGPD5Q99666 1765 aa10.08□□□□□ -0.8
SSX9-201ENST00000376909 FANCIQ9NVI1 1328 aa10.07□□□□□ -0.8
SSX9-201ENST00000376909 NEFLP07196 543 aa10.07□□□□□ -0.8
SSX9-201ENST00000376909 IL2RBP14784 551 aa10.07□□□□□ -0.8
SSX9-201ENST00000376909 TSR2Q969E8 191 aaKnown RBP10.07□□□□□ -0.8
SSX9-201ENST00000376909 MEGF6O75095 1541 aa10.07□□□□□ -0.8
SSX9-201ENST00000376909 RGPD2P0DJD1 1756 aa10.06□□□□□ -0.8
SSX9-201ENST00000376909 CT47B1P0C2W7 299 aaPredicted RBP10.06□□□□□ -0.8
SSX9-201ENST00000376909 EXOSC9Q06265 439 aaKnown RBP10.06□□□□□ -0.8
SSX9-201ENST00000376909 IL17REQ8NFR9 667 aa10.06□□□□□ -0.8
SSX9-201ENST00000376909 ZCRB1Q8TBF4 217 aaKnown RBP10.06□□□□□ -0.8
SSX9-201ENST00000376909 NGLY1Q96IV0 654 aa10.06□□□□□ -0.8
SSX9-201ENST00000376909 C8orf37Q96NL8 207 aa10.06□□□□□ -0.8
SSX9-201ENST00000376909 USP35Q9P2H5 1018 aa10.06□□□□□ -0.8
SSX9-201ENST00000376909 GTF3C3Q9Y5Q9 886 aa10.06□□□□□ -0.8
SSX9-201ENST00000376909 OVOS2A0A0G2JMS6 1433 aa10.06□□□□□ -0.8
SSX9-201ENST00000376909 CHL1O00533 1208 aa10.05□□□□□ -0.8
SSX9-201ENST00000376909 RNMTO43148 476 aaKnown RBP10.05□□□□□ -0.8
SSX9-201ENST00000376909 PHKG2P15735 406 aa10.05□□□□□ -0.8
SSX9-201ENST00000376909 MEX3CQ5U5Q3 659 aaKnown RBP10.05□□□□□ -0.8
SSX9-201ENST00000376909 IFNL2Q8IZJ0 200 aa10.05□□□□□ -0.8
SSX9-201ENST00000376909 MBIPQ9NS73 344 aa10.05□□□□□ -0.8
SSX9-201ENST00000376909 SLIT2O94813 1529 aa10.04□□□□□ -0.8
SSX9-201ENST00000376909 RIOK3O14730 519 aaKnown RBP10.04□□□□□ -0.8
SSX9-201ENST00000376909 HSP90AB1P08238 724 aaKnown RBP10.04□□□□□ -0.8
SSX9-201ENST00000376909 TAF7Q15545 349 aaPredicted RBP10.04□□□□□ -0.8
SSX9-201ENST00000376909 MPRIPQ6WCQ1 1025 aa10.04□□□□□ -0.8
SSX9-201ENST00000376909 UNC5CLQ8IV45 518 aa10.04□□□□□ -0.8
SSX9-201ENST00000376909 LGR6Q9HBX8 967 aa10.04□□□□□ -0.8
SSX9-201ENST00000376909 BABAM1Q9NWV8 329 aa10.04□□□□□ -0.8
SSX9-201ENST00000376909 THRAP3Q9Y2W1 955 aaKnown RBP10.04□□□□□ -0.8
SSX9-201ENST00000376909 RNF123Q5XPI4 1314 aa10.04□□□□□ -0.8
SSX9-201ENST00000376909 PCDH11XQ9BZA7 1347 aa10.04□□□□□ -0.8
SSX9-201ENST00000376909 PCDH11YQ9BZA8 1340 aa10.04□□□□□ -0.8
SSX9-201ENST00000376909 CEMIPQ8WUJ3 1361 aa10.03□□□□□ -0.8
SSX9-201ENST00000376909 CYP27B1O15528 508 aa10.03□□□□□ -0.8
SSX9-201ENST00000376909 SEC24BO95487 1268 aa10.03□□□□□ -0.8
SSX9-201ENST00000376909 RRP1P56182 461 aaKnown RBP10.03□□□□□ -0.8
SSX9-201ENST00000376909 TEFQ10587 303 aa10.03□□□□□ -0.8
SSX9-201ENST00000376909 FNBP4Q8N3X1 1017 aaPredicted RBP10.03□□□□□ -0.8
SSX9-201ENST00000376909 TSPYL4Q9UJ04 414 aa10.03□□□□□ -0.8
SSX9-201ENST00000376909 CCDC9Q9Y3X0 531 aaKnown RBP10.03□□□□□ -0.8
SSX9-201ENST00000376909 LRP6O75581 1613 aa10.03□□□□□ -0.8
SSX9-201ENST00000376909 SPATA31A1Q5TZJ5 1347 aa10.03□□□□□ -0.8
SSX9-201ENST00000376909 RARSP54136 660 aaKnown RBP10.02□□□□□ -0.81
SSX9-201ENST00000376909 VPS72Q15906 364 aa10.02□□□□□ -0.81
SSX9-201ENST00000376909 DCAF5Q96JK2 942 aa10.02□□□□□ -0.81
SSX9-201ENST00000376909 CDCA7Q9BWT1 371 aaPredicted RBP10.02□□□□□ -0.81
SSX9-201ENST00000376909 MIS18AQ9NYP9 233 aa10.02□□□□□ -0.81
SSX9-201ENST00000376909 SPATA31A5Q5VU36 1347 aa10.02□□□□□ -0.81
SSX9-201ENST00000376909 SPATA31A7Q8IWB4 1347 aa10.02□□□□□ -0.81
SSX9-201ENST00000376909 DLG5Q8TDM6 1919 aa10.01□□□□□ -0.81
SSX9-201ENST00000376909 DISP2A7MBM2 1401 aa10.01□□□□□ -0.81
SSX9-201ENST00000376909 ECM2O94769 699 aaPredicted RBP10.01□□□□□ -0.81
SSX9-201ENST00000376909 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.01□□□□□ -0.81
SSX9-201ENST00000376909 DDX54Q8TDD1 881 aaKnown RBP10.01□□□□□ -0.81
SSX9-201ENST00000376909 ZNF428Q96B54 188 aa10.01□□□□□ -0.81
SSX9-201ENST00000376909 USP21Q9UK80 565 aa10.01□□□□□ -0.81
SSX9-201ENST00000376909 PLCH1Q4KWH8 1693 aa10.01□□□□□ -0.81
SSX9-201ENST00000376909 BCL9LQ86UU0 1499 aa10□□□□□ -0.81
SSX9-201ENST00000376909 NRAPQ86VF7 1730 aa10□□□□□ -0.81
SSX9-201ENST00000376909 NWD2Q9ULI1 1742 aa10□□□□□ -0.81
SSX9-201ENST00000376909 BTBD11A6QL63 1104 aa10□□□□□ -0.81
SSX9-201ENST00000376909 EXOC5O00471 708 aa10□□□□□ -0.81
SSX9-201ENST00000376909 VAMP4O75379 141 aa10□□□□□ -0.81
SSX9-201ENST00000376909 BCAR3O75815 825 aa10□□□□□ -0.81
SSX9-201ENST00000376909 NKX1-1Q15270 411 aaPredicted RBP10□□□□□ -0.81
SSX9-201ENST00000376909 TWISTNBQ3B726 338 aaPredicted RBP10□□□□□ -0.81
SSX9-201ENST00000376909 MAMSTRQ6ZN01 415 aa10□□□□□ -0.81
SSX9-201ENST00000376909 BARGINQ6ZT62 677 aa10□□□□□ -0.81
SSX9-201ENST00000376909 C8orf58Q8NAV2 365 aa10□□□□□ -0.81
SSX9-201ENST00000376909 LRRC37A3O60309 1634 aa10□□□□□ -0.81
SSX9-201ENST00000376909 PKD1L3Q7Z443 1732 aa9.99□□□□□ -0.81
SSX9-201ENST00000376909 PARP4Q9UKK3 1724 aaKnown RBP9.99□□□□□ -0.81
SSX9-201ENST00000376909 ELL2O00472 640 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms