RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 DEKP35659 375 aaKnown RBP27.06■■□□□ 1.92
RNF39-202ENST00000376751 AKAP4Q5JQC9 854 aa27.06■■□□□ 1.92
RNF39-202ENST00000376751 USP35Q9P2H5 1018 aa27.06■■□□□ 1.92
RNF39-202ENST00000376751 NFKBIBQ15653 356 aa27.06■■□□□ 1.92
RNF39-202ENST00000376751 PLEKHO1Q53GL0 409 aaPredicted RBP27.06■■□□□ 1.92
RNF39-202ENST00000376751 DDX17Q92841 729 aaKnown RBP27.06■■□□□ 1.92
RNF39-202ENST00000376751 KCNQ3O43525 872 aa27.04■■□□□ 1.92
RNF39-202ENST00000376751 GSPT1P15170 499 aaKnown RBP27.04■■□□□ 1.92
RNF39-202ENST00000376751 EIF4A1P60842 406 aaKnown RBP27.04■■□□□ 1.92
RNF39-202ENST00000376751 HDGFL1Q5TGJ6 251 aa27.04■■□□□ 1.92
RNF39-202ENST00000376751 C16orf71Q8IYS4 520 aaPredicted RBP27.04■■□□□ 1.92
RNF39-202ENST00000376751 DCCP43146 1447 aa27.04■■□□□ 1.92
RNF39-202ENST00000376751 MPRIPQ6WCQ1 1025 aa27.04■■□□□ 1.92
RNF39-202ENST00000376751 OTUD7AQ8TE49 926 aaPredicted RBP27.04■■□□□ 1.92
RNF39-202ENST00000376751 PXDNLA1KZ92 1463 aa27.03■■□□□ 1.92
RNF39-202ENST00000376751 ATF3P18847 181 aa27.03■■□□□ 1.92
RNF39-202ENST00000376751 SMARCA5O60264 1052 aaPredicted RBP27.02■■□□□ 1.92
RNF39-202ENST00000376751 TBC1D9Q6ZT07 1266 aa27.02■■□□□ 1.92
RNF39-202ENST00000376751 AMOTQ4VCS5 1084 aa27.02■■□□□ 1.92
RNF39-202ENST00000376751 ZC3H6P61129 1189 aaKnown RBP27.01■■□□□ 1.91
RNF39-202ENST00000376751 BCL11AQ9H165 835 aa27.01■■□□□ 1.91
RNF39-202ENST00000376751 RNMTO43148 476 aaKnown RBP27■■□□□ 1.91
RNF39-202ENST00000376751 PHAXQ9H814 394 aaKnown RBP27■■□□□ 1.91
RNF39-202ENST00000376751 APBB1O00213 710 aa27■■□□□ 1.91
RNF39-202ENST00000376751 GNAI2P04899 355 aa27■■□□□ 1.91
RNF39-202ENST00000376751 SIPA1L3O60292 1781 aaPredicted RBP26.99■■□□□ 1.91
RNF39-202ENST00000376751 OVOS2A0A0G2JMS6 1433 aa26.99■■□□□ 1.91
RNF39-202ENST00000376751 ERBB3P21860 1342 aa26.99■■□□□ 1.91
RNF39-202ENST00000376751 RBM25P49756 843 aaKnown RBP26.99■■□□□ 1.91
RNF39-202ENST00000376751 TEFQ10587 303 aa26.99■■□□□ 1.91
RNF39-202ENST00000376751 TTC22Q5TAA0 569 aa26.98■■□□□ 1.91
RNF39-202ENST00000376751 NCOA3Q9Y6Q9 1424 aa26.98■■□□□ 1.91
RNF39-202ENST00000376751 COL18A1P39060 1754 aa26.98■■□□□ 1.91
RNF39-202ENST00000376751 CRYBG1Q9Y4K1 1723 aa26.98■■□□□ 1.91
RNF39-202ENST00000376751 HMMRO75330 724 aa26.98■■□□□ 1.91
RNF39-202ENST00000376751 HSPA2P54652 639 aa26.98■■□□□ 1.91
RNF39-202ENST00000376751 ADAMTS7Q9UKP4 1686 aa26.97■■□□□ 1.91
RNF39-202ENST00000376751 BTBD11A6QL63 1104 aa26.97■■□□□ 1.91
RNF39-202ENST00000376751 EIF2S2P20042 333 aaKnown RBP26.97■■□□□ 1.91
RNF39-202ENST00000376751 C1orf141Q5JVX7 400 aa26.97■■□□□ 1.91
RNF39-202ENST00000376751 SLKQ9H2G2 1235 aaPredicted RBP26.97■■□□□ 1.91
RNF39-202ENST00000376751 HOXB7P09629 217 aa26.97■■□□□ 1.91
RNF39-202ENST00000376751 ANTXR1Q9H6X2 564 aa26.97■■□□□ 1.91
RNF39-202ENST00000376751 XIRP1Q702N8 1843 aaKnown RBP26.96■■□□□ 1.91
RNF39-202ENST00000376751 CDC45O75419 566 aa26.96■■□□□ 1.91
RNF39-202ENST00000376751 GNAI3P08754 354 aa26.95■■□□□ 1.91
RNF39-202ENST00000376751 CHPF2Q9P2E5 772 aa26.95■■□□□ 1.91
RNF39-202ENST00000376751 LMTK3Q96Q04 1460 aa26.94■■□□□ 1.9
RNF39-202ENST00000376751 USP44Q9H0E7 712 aa26.93■■□□□ 1.9
RNF39-202ENST00000376751 TNS3Q68CZ2 1445 aa26.92■■□□□ 1.9
RNF39-202ENST00000376751 PNMA6EA0A0J9YXQ4 647 aa26.92■■□□□ 1.9
RNF39-202ENST00000376751 FRAT2O75474 233 aaPredicted RBP26.92■■□□□ 1.9
RNF39-202ENST00000376751 LRRFIP2Q9Y608 721 aaKnown RBP26.92■■□□□ 1.9
RNF39-202ENST00000376751 CABLES1Q8TDN4 633 aa26.91■■□□□ 1.9
RNF39-202ENST00000376751 EXOC6BQ9Y2D4 811 aa26.91■■□□□ 1.9
RNF39-202ENST00000376751 ANXA1P04083 346 aa26.9■■□□□ 1.9
RNF39-202ENST00000376751 ATP8B2P98198 1209 aa26.9■■□□□ 1.9
RNF39-202ENST00000376751 CADPS2Q86UW7 1296 aa26.9■■□□□ 1.9
RNF39-202ENST00000376751 KIF2CQ99661 725 aa26.9■■□□□ 1.9
RNF39-202ENST00000376751 NPHP3Q7Z494 1330 aa26.89■■□□□ 1.9
RNF39-202ENST00000376751 HEG1Q9ULI3 1381 aa26.89■■□□□ 1.9
RNF39-202ENST00000376751 MEGF6O75095 1541 aa26.88■■□□□ 1.89
RNF39-202ENST00000376751 SCN11AQ9UI33 1791 aa26.88■■□□□ 1.89
RNF39-202ENST00000376751 NLRP2Q9NX02 1062 aa26.88■■□□□ 1.89
RNF39-202ENST00000376751 SDSP20132 328 aa26.87■■□□□ 1.89
RNF39-202ENST00000376751 SPRYD3Q8NCJ5 442 aa26.87■■□□□ 1.89
RNF39-202ENST00000376751 TUBGCP6Q96RT7 1819 aa26.87■■□□□ 1.89
RNF39-202ENST00000376751 ADCY9O60503 1353 aa26.87■■□□□ 1.89
RNF39-202ENST00000376751 UBTFL1P0CB47 393 aaPredicted RBP26.86■■□□□ 1.89
RNF39-202ENST00000376751 SRCIN1Q9C0H9 1055 aa26.86■■□□□ 1.89
RNF39-202ENST00000376751 KDM6AO15550 1401 aaPredicted RBP26.85■■□□□ 1.89
RNF39-202ENST00000376751 PRAMEF22A3QJZ6 481 aa26.85■■□□□ 1.89
RNF39-202ENST00000376751 GIGYF1O75420 1035 aaPredicted RBP26.85■■□□□ 1.89
RNF39-202ENST00000376751 IBTKQ9P2D0 1353 aaPredicted RBP26.85■■□□□ 1.89
RNF39-202ENST00000376751 PI4KAP2A4QPH2 592 aa26.84■■□□□ 1.89
RNF39-202ENST00000376751 CHRNA2Q15822 529 aa26.84■■□□□ 1.89
RNF39-202ENST00000376751 PI4KAP1Q8N8J0 262 aa26.84■■□□□ 1.89
RNF39-202ENST00000376751 DNAAF4Q8WXU2 420 aa26.84■■□□□ 1.89
RNF39-202ENST00000376751 SPATA31A3Q5VYP0 1347 aa26.84■■□□□ 1.89
RNF39-202ENST00000376751 SALL3Q9BXA9 1300 aa26.84■■□□□ 1.89
RNF39-202ENST00000376751 PROSER3Q2NL68 480 aa26.84■■□□□ 1.89
RNF39-202ENST00000376751 BEND3Q5T5X7 828 aa26.84■■□□□ 1.89
RNF39-202ENST00000376751 HSCBQ8IWL3 235 aa26.84■■□□□ 1.89
RNF39-202ENST00000376751 RAPGEF4Q8WZA2 1011 aa26.84■■□□□ 1.89
RNF39-202ENST00000376751 ABCC6O95255 1503 aa26.84■■□□□ 1.89
RNF39-202ENST00000376751 STRCQ7RTU9 1775 aa26.83■■□□□ 1.89
RNF39-202ENST00000376751 PDE1AP54750 535 aa26.83■■□□□ 1.89
RNF39-202ENST00000376751 SNX21Q969T3 373 aa26.82■■□□□ 1.88
RNF39-202ENST00000376751 CHMP4AQ9BY43 222 aa26.82■■□□□ 1.88
RNF39-202ENST00000376751 OSBPL3Q9H4L5 887 aa26.82■■□□□ 1.88
RNF39-202ENST00000376751 LRRCC1Q9C099 1032 aa26.82■■□□□ 1.88
RNF39-202ENST00000376751 C5P01031 1676 aa26.81■■□□□ 1.88
RNF39-202ENST00000376751 DBF4Q9UBU7 674 aaPredicted RBP26.81■■□□□ 1.88
RNF39-202ENST00000376751 TATP17735 454 aaPredicted RBP26.8■■□□□ 1.88
RNF39-202ENST00000376751 TSHZ3Q63HK5 1081 aa26.8■■□□□ 1.88
RNF39-202ENST00000376751 SSH3Q8TE77 659 aa26.8■■□□□ 1.88
RNF39-202ENST00000376751 NBPF7P0C2Y1 421 aaPredicted RBP26.79■■□□□ 1.88
RNF39-202ENST00000376751 PKD1L3Q7Z443 1732 aa26.79■■□□□ 1.88
RNF39-202ENST00000376751 PHKG2P15735 406 aa26.78■■□□□ 1.88
RNF39-202ENST00000376751 BRINP3Q76B58 766 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms