RNA–Protein interactions for RNA: ENST00000376745.8

PPP1CA-203, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CA, Length 1,476 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-203ENST00000376745 HTATSF1O43719 755 aaKnown RBP43.92■■■■■ 4.62
PPP1CA-203ENST00000376745 SLC27A3Q5K4L6 730 aa43.92■■■■■ 4.62
PPP1CA-203ENST00000376745 CCDC146Q8IYE0 955 aa43.91■■■■■ 4.62
PPP1CA-203ENST00000376745 RUNDC1Q96C34 613 aa43.91■■■■■ 4.62
PPP1CA-203ENST00000376745 DIEXFQ68CQ4 756 aaKnown RBP43.87■■■■■ 4.61
PPP1CA-203ENST00000376745 RTF1Q92541 710 aaKnown RBP43.86■■■■■ 4.61
PPP1CA-203ENST00000376745 DLG5Q8TDM6 1919 aa43.85■■■■■ 4.61
PPP1CA-203ENST00000376745 MCM10Q7L590 875 aa43.84■■■■■ 4.61
PPP1CA-203ENST00000376745 CCNL1Q9UK58 526 aaPredicted RBP43.84■■■■■ 4.61
PPP1CA-203ENST00000376745 TMPOP42166 694 aaKnown RBP43.83■■■■■ 4.61
PPP1CA-203ENST00000376745 KCNQ4P56696 695 aa43.83■■■■■ 4.61
PPP1CA-203ENST00000376745 TEFQ10587 303 aa43.82■■■■■ 4.6
PPP1CA-203ENST00000376745 DCTN1Q14203 1278 aa43.82■■■■■ 4.6
PPP1CA-203ENST00000376745 NBPF14Q5TI25 921 aa43.82■■■■■ 4.6
PPP1CA-203ENST00000376745 PAPPAQ13219 1627 aa43.81■■■■■ 4.6
PPP1CA-203ENST00000376745 ANO8Q9HCE9 1232 aaPredicted RBP43.81■■■■■ 4.6
PPP1CA-203ENST00000376745 LOC102724428A0A0B4J2F2 783 aa43.8■■■■■ 4.6
PPP1CA-203ENST00000376745 SIK1P57059 783 aa43.8■■■■■ 4.6
PPP1CA-203ENST00000376745 RIPK4P57078 832 aa43.79■■■■■ 4.6
PPP1CA-203ENST00000376745 SIPA1L3O60292 1781 aaPredicted RBP43.79■■■■■ 4.6
PPP1CA-203ENST00000376745 SLC39A6Q13433 755 aa43.74■■■■■ 4.59
PPP1CA-203ENST00000376745 SLC4A9Q96Q91 983 aa43.74■■■■■ 4.59
PPP1CA-203ENST00000376745 RRP7AQ9Y3A4 280 aaKnown RBP43.74■■■■■ 4.59
PPP1CA-203ENST00000376745 R3HDM1Q15032 1099 aaKnown RBP43.72■■■■■ 4.59
PPP1CA-203ENST00000376745 APAF1O14727 1248 aa43.7■■■■■ 4.59
PPP1CA-203ENST00000376745 SLC15A2Q16348 729 aa43.7■■■■■ 4.59
PPP1CA-203ENST00000376745 AKT1S1Q96B36 256 aa43.7■■■■■ 4.59
PPP1CA-203ENST00000376745 ZNF831Q5JPB2 1677 aa43.7■■■■■ 4.59
PPP1CA-203ENST00000376745 CCER2I3L3R5 266 aa43.7■■■■■ 4.59
PPP1CA-203ENST00000376745 PTCD1O75127 700 aaKnown RBP43.7■■■■■ 4.59
PPP1CA-203ENST00000376745 HMGB2P26583 209 aaKnown RBP43.7■■■■■ 4.59
PPP1CA-203ENST00000376745 ATP6V1AP38606 617 aa43.7■■■■■ 4.59
PPP1CA-203ENST00000376745 RBM42Q9BTD8 480 aaKnown RBP43.7■■■■■ 4.59
PPP1CA-203ENST00000376745 STK32BQ9NY57 414 aa43.7■■■■■ 4.59
PPP1CA-203ENST00000376745 PSDA5PKW4 1024 aaPredicted RBP43.69■■■■■ 4.58
PPP1CA-203ENST00000376745 LMOD3Q0VAK6 560 aa43.69■■■■■ 4.58
PPP1CA-203ENST00000376745 ITPK1Q13572 414 aa43.69■■■■■ 4.58
PPP1CA-203ENST00000376745 NEUROD2Q15784 382 aa43.69■■■■■ 4.58
PPP1CA-203ENST00000376745 ZNF827Q17R98 1081 aa43.69■■■■■ 4.58
PPP1CA-203ENST00000376745 TAF1LQ8IZX4 1826 aa43.68■■■■■ 4.58
PPP1CA-203ENST00000376745 THUMPD2Q9BTF0 503 aaKnown RBP43.68■■■■■ 4.58
PPP1CA-203ENST00000376745 C5P01031 1676 aa43.67■■■■■ 4.58
PPP1CA-203ENST00000376745 ZNF790Q6PG37 636 aa43.67■■■■■ 4.58
PPP1CA-203ENST00000376745 TRIM35Q9UPQ4 493 aa43.67■■■■■ 4.58
PPP1CA-203ENST00000376745 KCPQ6ZWJ8 1503 aa43.67■■■■■ 4.58
PPP1CA-203ENST00000376745 BTBD11A6QL63 1104 aa43.65■■■■■ 4.58
PPP1CA-203ENST00000376745 TAF7Q15545 349 aaPredicted RBP43.65■■■■■ 4.58
PPP1CA-203ENST00000376745 UBR2Q8IWV8 1755 aa43.63■■■■■ 4.58
PPP1CA-203ENST00000376745 FAM9BQ8IZU0 186 aa43.63■■■■■ 4.57
PPP1CA-203ENST00000376745 LINC00116Q8NCU8 138 aa43.63■■■■■ 4.57
PPP1CA-203ENST00000376745 TTC5Q8N0Z6 440 aa43.62■■■■■ 4.57
PPP1CA-203ENST00000376745 KCNQ3O43525 872 aa43.59■■■■■ 4.57
PPP1CA-203ENST00000376745 MIER1Q8N108 512 aa43.59■■■■■ 4.57
PPP1CA-203ENST00000376745 CICQ96RK0 1608 aaPredicted RBP43.59■■■■■ 4.57
PPP1CA-203ENST00000376745 C4BP0C0L5 1744 aa43.59■■■■■ 4.57
PPP1CA-203ENST00000376745 ZNF496Q96IT1 587 aaPredicted RBP43.58■■■■■ 4.57
PPP1CA-203ENST00000376745 VSIG10Q8N0Z9 540 aa43.57■■■■■ 4.57
PPP1CA-203ENST00000376745 MIS18AQ9NYP9 233 aa43.54■■■■■ 4.56
PPP1CA-203ENST00000376745 TFCP2L1Q9NZI6 479 aa43.54■■■■■ 4.56
PPP1CA-203ENST00000376745 TJP1Q07157 1748 aa43.54■■■■■ 4.56
PPP1CA-203ENST00000376745 COL5A3P25940 1745 aaPredicted RBP43.53■■■■■ 4.56
PPP1CA-203ENST00000376745 HEG1Q9ULI3 1381 aa43.52■■■■■ 4.56
PPP1CA-203ENST00000376745 FMNL2Q96PY5 1086 aa43.51■■■■■ 4.56
PPP1CA-203ENST00000376745 DNAJC10Q8IXB1 793 aa43.51■■■■■ 4.56
PPP1CA-203ENST00000376745 PDGFDQ9GZP0 370 aaPredicted RBP43.51■■■■■ 4.56
PPP1CA-203ENST00000376745 QSER1Q2KHR3 1735 aa43.5■■■■■ 4.55
PPP1CA-203ENST00000376745 NCBP3Q53F19 620 aaKnown RBP43.5■■■■■ 4.55
PPP1CA-203ENST00000376745 RC3H1Q5TC82 1133 aaKnown RBP43.5■■■■■ 4.55
PPP1CA-203ENST00000376745 BABAM1Q9NWV8 329 aa43.49■■■■■ 4.55
PPP1CA-203ENST00000376745 PNPLA7Q6ZV29 1317 aa43.49■■■■■ 4.55
PPP1CA-203ENST00000376745 CNTNAP4Q9C0A0 1308 aa43.49■■■■■ 4.55
PPP1CA-203ENST00000376745 AK7Q96M32 723 aa43.48■■■■■ 4.55
PPP1CA-203ENST00000376745 KDM3BQ7LBC6 1761 aa43.48■■■■■ 4.55
PPP1CA-203ENST00000376745 TUBGCP6Q96RT7 1819 aa43.47■■■■■ 4.55
PPP1CA-203ENST00000376745 CASZ1Q86V15 1759 aa43.46■■■■■ 4.55
PPP1CA-203ENST00000376745 CCDC27Q2M243 656 aa43.46■■■■■ 4.55
PPP1CA-203ENST00000376745 AMIGO3Q86WK7 504 aa43.45■■■■■ 4.55
PPP1CA-203ENST00000376745 CYP19A1P11511 503 aaPredicted RBP43.44■■■■■ 4.54
PPP1CA-203ENST00000376745 MYH14Q7Z406 1995 aaKnown RBP43.43■■■■■ 4.54
PPP1CA-203ENST00000376745 SENP3-EIF4A1A0A087X0R7 540 aa43.43■■■■■ 4.54
PPP1CA-203ENST00000376745 CRKLP46109 303 aaKnown RBP43.43■■■■■ 4.54
PPP1CA-203ENST00000376745 UBR3Q6ZT12 1888 aa43.43■■■■■ 4.54
PPP1CA-203ENST00000376745 CHL1O00533 1208 aa43.41■■■■■ 4.54
PPP1CA-203ENST00000376745 GNPATO15228 680 aa43.41■■■■■ 4.54
PPP1CA-203ENST00000376745 TEX13AQ9BXU3 409 aaPredicted RBP43.41■■■■■ 4.54
PPP1CA-203ENST00000376745 TSPYL4Q9UJ04 414 aa43.41■■■■■ 4.54
PPP1CA-203ENST00000376745 EIF4A1P60842 406 aaKnown RBP43.4■■■■■ 4.54
PPP1CA-203ENST00000376745 INTS5Q6P9B9 1019 aaKnown RBP43.39■■■■■ 4.54
PPP1CA-203ENST00000376745 COL23A1Q86Y22 540 aaPredicted RBP43.39■■■■■ 4.54
PPP1CA-203ENST00000376745 WWC1Q8IX03 1113 aa43.38■■■■■ 4.54
PPP1CA-203ENST00000376745 FLAD1Q8NFF5 587 aa43.38■■■■■ 4.54
PPP1CA-203ENST00000376745 SNRPA1P09661 255 aaKnown RBP43.38■■■■■ 4.53
PPP1CA-203ENST00000376745 SSFA2P28290 1259 aa43.38■■■■■ 4.53
PPP1CA-203ENST00000376745 CALD1Q05682 793 aaKnown RBP43.37■■■■■ 4.53
PPP1CA-203ENST00000376745 CFAP44Q96MT7 982 aa43.37■■■■■ 4.53
PPP1CA-203ENST00000376745 RPS6KA4O75676 772 aa43.36■■■■■ 4.53
PPP1CA-203ENST00000376745 STARD3NLO95772 234 aa43.36■■■■■ 4.53
PPP1CA-203ENST00000376745 SMIM5Q71RC9 77 aa43.36■■■■■ 4.53
PPP1CA-203ENST00000376745 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP43.35■■■■■ 4.53
PPP1CA-203ENST00000376745 ZNF853P0CG23 659 aa43.35■■■■■ 4.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms