RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 ISY1Q9ULR0 285 aaKnown RBP13.51□□□□□ -0.25
HDAC6-203ENST00000376619 MAP3K2Q9Y2U5 619 aa13.51□□□□□ -0.25
HDAC6-203ENST00000376619 ABCC11Q96J66 1382 aa13.51□□□□□ -0.25
HDAC6-203ENST00000376619 TRMT2AQ8IZ69 625 aaKnown RBP13.51□□□□□ -0.25
HDAC6-203ENST00000376619 TBX22Q9Y458 520 aa13.51□□□□□ -0.25
HDAC6-203ENST00000376619 ADAMTS2O95450 1211 aa13.5□□□□□ -0.25
HDAC6-203ENST00000376619 WASHC4Q2M389 1173 aa13.5□□□□□ -0.25
HDAC6-203ENST00000376619 EIF2AK4Q9P2K8 1649 aaKnown RBP13.5□□□□□ -0.25
HDAC6-203ENST00000376619 MSH6P52701 1360 aa13.5□□□□□ -0.25
HDAC6-203ENST00000376619 NFATC2IPQ8NCF5 419 aa13.5□□□□□ -0.25
HDAC6-203ENST00000376619 NSD2O96028 1365 aa13.5□□□□□ -0.25
HDAC6-203ENST00000376619 PLXNC1O60486 1568 aa13.5□□□□□ -0.25
HDAC6-203ENST00000376619 NBPF6Q5VWK0 638 aa13.5□□□□□ -0.25
HDAC6-203ENST00000376619 CERKQ8TCT0 537 aa13.5□□□□□ -0.25
HDAC6-203ENST00000376619 NBPF4Q96M43 638 aa13.5□□□□□ -0.25
HDAC6-203ENST00000376619 ANO8Q9HCE9 1232 aaPredicted RBP13.5□□□□□ -0.25
HDAC6-203ENST00000376619 ZKSCAN1P17029 563 aaPredicted RBP13.5□□□□□ -0.25
HDAC6-203ENST00000376619 CADPS2Q86UW7 1296 aa13.5□□□□□ -0.25
HDAC6-203ENST00000376619 NDUFB9Q9Y6M9 179 aa13.5□□□□□ -0.25
HDAC6-203ENST00000376619 GCP02774 474 aa13.49□□□□□ -0.25
HDAC6-203ENST00000376619 CPA1P15085 419 aa13.49□□□□□ -0.25
HDAC6-203ENST00000376619 HDAC1Q13547 482 aaPredicted RBP13.49□□□□□ -0.25
HDAC6-203ENST00000376619 PANK2Q9BZ23 570 aa13.49□□□□□ -0.25
HDAC6-203ENST00000376619 DNAAF4Q8WXU2 420 aa13.49□□□□□ -0.25
HDAC6-203ENST00000376619 TNPO1Q92973 898 aaKnown RBP13.49□□□□□ -0.25
HDAC6-203ENST00000376619 PNMA6EA0A0J9YXQ4 647 aa13.49□□□□□ -0.25
HDAC6-203ENST00000376619 GNL2Q13823 731 aaKnown RBP13.49□□□□□ -0.25
HDAC6-203ENST00000376619 SMC5Q8IY18 1101 aa13.49□□□□□ -0.25
HDAC6-203ENST00000376619 CEP152O94986 1710 aa13.48□□□□□ -0.25
HDAC6-203ENST00000376619 NLRP1Q9C000 1473 aa13.48□□□□□ -0.25
HDAC6-203ENST00000376619 HOXC9P31274 260 aa13.48□□□□□ -0.25
HDAC6-203ENST00000376619 FKBP4Q02790 459 aaKnown RBP eCLIP13.48□□□□□ -0.25
HDAC6-203ENST00000376619 SMC3Q9UQE7 1217 aa13.48□□□□□ -0.25
HDAC6-203ENST00000376619 GPTP24298 496 aa13.48□□□□□ -0.25
HDAC6-203ENST00000376619 CEP85Q6P2H3 762 aa13.48□□□□□ -0.25
HDAC6-203ENST00000376619 UBE3BQ7Z3V4 1068 aa13.48□□□□□ -0.25
HDAC6-203ENST00000376619 A2ML1A8K2U0 1454 aa13.48□□□□□ -0.25
HDAC6-203ENST00000376619 SNRKQ9NRH2 765 aa13.47□□□□□ -0.25
HDAC6-203ENST00000376619 MTMR7Q9Y216 660 aa13.47□□□□□ -0.25
HDAC6-203ENST00000376619 NINLQ9Y2I6 1382 aa13.47□□□□□ -0.25
HDAC6-203ENST00000376619 EFCAB6Q5THR3 1501 aa13.47□□□□□ -0.25
HDAC6-203ENST00000376619 CNTROBQ8N137 903 aa13.47□□□□□ -0.25
HDAC6-203ENST00000376619 BMP2KLQ5H9B9 411 aa13.47□□□□□ -0.25
HDAC6-203ENST00000376619 ZGPATQ8N5A5 531 aaKnown RBP13.47□□□□□ -0.25
HDAC6-203ENST00000376619 CLTCL1P53675 1640 aa13.47□□□□□ -0.25
HDAC6-203ENST00000376619 ROBO2Q9HCK4 1378 aa13.47□□□□□ -0.25
HDAC6-203ENST00000376619 PRAMEF22A3QJZ6 481 aa13.46□□□□□ -0.25
HDAC6-203ENST00000376619 H3BQV1 296 aa13.46□□□□□ -0.25
HDAC6-203ENST00000376619 IFFO2Q5TF58 517 aa13.46□□□□□ -0.25
HDAC6-203ENST00000376619 PLEKHM2Q8IWE5 1019 aa13.46□□□□□ -0.25
HDAC6-203ENST00000376619 C19orf44Q9H6X5 657 aa13.46□□□□□ -0.25
HDAC6-203ENST00000376619 TMEM94Q12767 1356 aa13.46□□□□□ -0.25
HDAC6-203ENST00000376619 NPC1L1Q9UHC9 1359 aa13.46□□□□□ -0.25
HDAC6-203ENST00000376619 NBPF7P0C2Y1 421 aaPredicted RBP13.46□□□□□ -0.25
HDAC6-203ENST00000376619 PRPF40BQ6NWY9 871 aaKnown RBP13.46□□□□□ -0.25
HDAC6-203ENST00000376619 RABEP1Q15276 862 aa13.46□□□□□ -0.25
HDAC6-203ENST00000376619 JAKMIP1Q96N16 626 aaKnown RBP13.46□□□□□ -0.25
HDAC6-203ENST00000376619 IL16Q14005 1332 aa13.46□□□□□ -0.26
HDAC6-203ENST00000376619 COPS6Q7L5N1 327 aa13.46□□□□□ -0.26
HDAC6-203ENST00000376619 FAM184AQ8NB25 1140 aa13.46□□□□□ -0.26
HDAC6-203ENST00000376619 IL17REQ8NFR9 667 aa13.46□□□□□ -0.26
HDAC6-203ENST00000376619 ANKRD44Q8N8A2 993 aa13.45□□□□□ -0.26
HDAC6-203ENST00000376619 DDX11Q96FC9 970 aa13.45□□□□□ -0.26
HDAC6-203ENST00000376619 CAMSAP1Q5T5Y3 1602 aa13.45□□□□□ -0.26
HDAC6-203ENST00000376619 PDE1AP54750 535 aa13.45□□□□□ -0.26
HDAC6-203ENST00000376619 TTC22Q5TAA0 569 aa13.45□□□□□ -0.26
HDAC6-203ENST00000376619 RAB11FIP4Q86YS3 637 aa13.45□□□□□ -0.26
HDAC6-203ENST00000376619 RBM27Q9P2N5 1060 aaKnown RBP13.45□□□□□ -0.26
HDAC6-203ENST00000376619 CASTP20810 708 aaKnown RBP13.44□□□□□ -0.26
HDAC6-203ENST00000376619 RUFY2Q8WXA3 655 aa13.44□□□□□ -0.26
HDAC6-203ENST00000376619 INSRP06213 1382 aa13.44□□□□□ -0.26
HDAC6-203ENST00000376619 BICDL1Q6ZP65 573 aa13.44□□□□□ -0.26
HDAC6-203ENST00000376619 CHMP4AQ9BY43 222 aa13.44□□□□□ -0.26
HDAC6-203ENST00000376619 A0A087WZG4 1122 aa13.44□□□□□ -0.26
HDAC6-203ENST00000376619 CREBRFQ8IUR6 639 aa13.44□□□□□ -0.26
HDAC6-203ENST00000376619 KCNH5Q8NCM2 988 aa13.44□□□□□ -0.26
HDAC6-203ENST00000376619 TRPM2O94759 1503 aa13.44□□□□□ -0.26
HDAC6-203ENST00000376619 CHL1O00533 1208 aa13.43□□□□□ -0.26
HDAC6-203ENST00000376619 LRRC2Q9BYS8 371 aa13.43□□□□□ -0.26
HDAC6-203ENST00000376619 ATP2B1P20020 1258 aa13.43□□□□□ -0.26
HDAC6-203ENST00000376619 CCDC83Q8IWF9 413 aa13.43□□□□□ -0.26
HDAC6-203ENST00000376619 XAGE3Q8WTP9 111 aa13.43□□□□□ -0.26
HDAC6-203ENST00000376619 SLAIN2Q9P270 581 aa13.43□□□□□ -0.26
HDAC6-203ENST00000376619 ARHGAP31Q2M1Z3 1444 aa13.43□□□□□ -0.26
HDAC6-203ENST00000376619 SIRT2Q8IXJ6 389 aa13.43□□□□□ -0.26
HDAC6-203ENST00000376619 HDAC5Q9UQL6 1122 aa13.43□□□□□ -0.26
HDAC6-203ENST00000376619 NUCB2P80303 420 aa13.42□□□□□ -0.26
HDAC6-203ENST00000376619 DBF4Q9UBU7 674 aaPredicted RBP13.42□□□□□ -0.26
HDAC6-203ENST00000376619 USP19O94966 1318 aa13.42□□□□□ -0.26
HDAC6-203ENST00000376619 DCTPP1Q9H773 170 aa13.42□□□□□ -0.26
HDAC6-203ENST00000376619 CD2BP2O95400 341 aaKnown RBP13.42□□□□□ -0.26
HDAC6-203ENST00000376619 RHPN1Q8TCX5 695 aa13.42□□□□□ -0.26
HDAC6-203ENST00000376619 CROCC2H7BZ55 1655 aa13.41□□□□□ -0.26
HDAC6-203ENST00000376619 NASPP49321 788 aaPredicted RBP13.41□□□□□ -0.26
HDAC6-203ENST00000376619 HSP90AB4PQ58FF6 505 aa13.41□□□□□ -0.26
HDAC6-203ENST00000376619 NECAB1Q8N987 351 aa13.41□□□□□ -0.26
HDAC6-203ENST00000376619 SF3A1Q15459 793 aaKnown RBP13.41□□□□□ -0.26
HDAC6-203ENST00000376619 TRPM1Q7Z4N2 1603 aa13.41□□□□□ -0.26
HDAC6-203ENST00000376619 BICD2Q8TD16 824 aa13.41□□□□□ -0.26
HDAC6-203ENST00000376619 KIF1BPQ96EK5 621 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms