RNA–Protein interactions for RNA: ENST00000375987.3

LINC01854-201, Transcript of long intergenic non-protein coding RNA 1854, humanhuman

TSL 2 BASIC

Gene LINC01854, Length 2,213 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01854-201ENST00000375987 USP25Q9UHP3 1055 aa12.57□□□□□ -0.4
LINC01854-201ENST00000375987 TAOK2Q9UL54 1235 aa12.57□□□□□ -0.4
LINC01854-201ENST00000375987 CPSF1Q10570 1443 aaKnown RBP12.56□□□□□ -0.4
LINC01854-201ENST00000375987 WDR33Q9C0J8 1336 aaKnown RBP12.56□□□□□ -0.4
LINC01854-201ENST00000375987 LETM1O95202 739 aaPredicted RBP12.56□□□□□ -0.4
LINC01854-201ENST00000375987 CEBPAP49715 358 aaPredicted RBP12.56□□□□□ -0.4
LINC01854-201ENST00000375987 OSBPL3Q9H4L5 887 aa12.56□□□□□ -0.4
LINC01854-201ENST00000375987 DLG5Q8TDM6 1919 aa12.56□□□□□ -0.4
LINC01854-201ENST00000375987 YTHDC2Q9H6S0 1430 aaKnown RBP12.56□□□□□ -0.4
LINC01854-201ENST00000375987 MSH6P52701 1360 aa12.56□□□□□ -0.4
LINC01854-201ENST00000375987 ZBTB7CA1YPR0 619 aa12.56□□□□□ -0.4
LINC01854-201ENST00000375987 CCDC183Q5T5S1 534 aa12.56□□□□□ -0.4
LINC01854-201ENST00000375987 NRXN3Q9Y4C0 1643 aa12.55□□□□□ -0.4
LINC01854-201ENST00000375987 MAP2P11137 1827 aaKnown RBP12.55□□□□□ -0.4
LINC01854-201ENST00000375987 KIF20AO95235 890 aa12.55□□□□□ -0.4
LINC01854-201ENST00000375987 ADCY5O95622 1261 aa12.55□□□□□ -0.4
LINC01854-201ENST00000375987 CHAF1AQ13111 956 aaPredicted RBP12.55□□□□□ -0.4
LINC01854-201ENST00000375987 RGS12O14924 1447 aa12.55□□□□□ -0.4
LINC01854-201ENST00000375987 PDE1AP54750 535 aa12.54□□□□□ -0.4
LINC01854-201ENST00000375987 PPP4R3BQ5MIZ7 849 aa12.54□□□□□ -0.4
LINC01854-201ENST00000375987 PRAM1Q96QH2 718 aa12.54□□□□□ -0.4
LINC01854-201ENST00000375987 TTC12Q9H892 705 aaPredicted RBP12.54□□□□□ -0.4
LINC01854-201ENST00000375987 DIAPH3Q9NSV4 1193 aa12.54□□□□□ -0.4
LINC01854-201ENST00000375987 SSH2Q76I76 1423 aa12.54□□□□□ -0.4
LINC01854-201ENST00000375987 PTPRCP08575 1304 aa12.54□□□□□ -0.4
LINC01854-201ENST00000375987 USP48Q86UV5 1035 aa12.54□□□□□ -0.4
LINC01854-201ENST00000375987 TMEM87AQ8NBN3 555 aa12.54□□□□□ -0.4
LINC01854-201ENST00000375987 ZNF830Q96NB3 372 aaPredicted RBP12.54□□□□□ -0.4
LINC01854-201ENST00000375987 ESYT1Q9BSJ8 1104 aa12.54□□□□□ -0.4
LINC01854-201ENST00000375987 GADD45BO75293 160 aaPredicted RBP12.53□□□□□ -0.4
LINC01854-201ENST00000375987 CBX1P83916 185 aa12.53□□□□□ -0.4
LINC01854-201ENST00000375987 TSC1Q92574 1164 aa12.53□□□□□ -0.4
LINC01854-201ENST00000375987 GDPD2Q9HCC8 539 aa12.53□□□□□ -0.4
LINC01854-201ENST00000375987 CDK12Q9NYV4 1490 aaPredicted RBP12.53□□□□□ -0.4
LINC01854-201ENST00000375987 CABP1Q9NZU7 370 aa12.53□□□□□ -0.4
LINC01854-201ENST00000375987 SETD1BQ9UPS6 1966 aaKnown RBP12.52□□□□□ -0.4
LINC01854-201ENST00000375987 TCHHQ07283 1943 aa12.52□□□□□ -0.41
LINC01854-201ENST00000375987 TPM3P06753 285 aa12.52□□□□□ -0.41
LINC01854-201ENST00000375987 MX1P20591 662 aa12.52□□□□□ -0.41
LINC01854-201ENST00000375987 IL13P35225 146 aa12.52□□□□□ -0.41
LINC01854-201ENST00000375987 NOL8Q76FK4 1167 aaKnown RBP12.52□□□□□ -0.41
LINC01854-201ENST00000375987 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.52□□□□□ -0.41
LINC01854-201ENST00000375987 PDCL2Q8N4E4 241 aa12.52□□□□□ -0.41
LINC01854-201ENST00000375987 MPNDQ8N594 471 aa12.52□□□□□ -0.41
LINC01854-201ENST00000375987 JARID2Q92833 1246 aaPredicted RBP12.52□□□□□ -0.41
LINC01854-201ENST00000375987 MEIS3Q99687 375 aa12.52□□□□□ -0.41
LINC01854-201ENST00000375987 BCL2L12Q9HB09 334 aa12.52□□□□□ -0.41
LINC01854-201ENST00000375987 ATP7BP35670 1465 aa12.52□□□□□ -0.41
LINC01854-201ENST00000375987 HCLS1P14317 486 aaPredicted RBP12.52□□□□□ -0.41
LINC01854-201ENST00000375987 FOXD4L6Q3SYB3 417 aaPredicted RBP12.52□□□□□ -0.41
LINC01854-201ENST00000375987 FOXD4L3Q6VB84 417 aaPredicted RBP12.52□□□□□ -0.41
LINC01854-201ENST00000375987 CDK19Q9BWU1 502 aa12.52□□□□□ -0.41
LINC01854-201ENST00000375987 ANO2Q9NQ90 1003 aa12.52□□□□□ -0.41
LINC01854-201ENST00000375987 ALKQ9UM73 1620 aa12.51□□□□□ -0.41
LINC01854-201ENST00000375987 KDM4AO75164 1064 aa12.51□□□□□ -0.41
LINC01854-201ENST00000375987 AEBP2Q6ZN18 517 aaPredicted RBP12.51□□□□□ -0.41
LINC01854-201ENST00000375987 UBE2HP62256 183 aa12.5□□□□□ -0.41
LINC01854-201ENST00000375987 C17orf53Q8N3J3 647 aaPredicted RBP12.5□□□□□ -0.41
LINC01854-201ENST00000375987 IL17RAQ96F46 866 aa12.5□□□□□ -0.41
LINC01854-201ENST00000375987 ARHGAP23Q9P227 1491 aa12.5□□□□□ -0.41
LINC01854-201ENST00000375987 FAM83GA6ND36 823 aa12.5□□□□□ -0.41
LINC01854-201ENST00000375987 GOLGA6L6A8MZA4 724 aa12.5□□□□□ -0.41
LINC01854-201ENST00000375987 FBLN1P23142 703 aa12.5□□□□□ -0.41
LINC01854-201ENST00000375987 PALD1Q9ULE6 856 aa12.5□□□□□ -0.41
LINC01854-201ENST00000375987 EMILIN1Q9Y6C2 1016 aa12.5□□□□□ -0.41
LINC01854-201ENST00000375987 ZNF142P52746 1687 aaPredicted RBP12.5□□□□□ -0.41
LINC01854-201ENST00000375987 SLIT1O75093 1534 aa12.49□□□□□ -0.41
LINC01854-201ENST00000375987 TUBGCP6Q96RT7 1819 aa12.49□□□□□ -0.41
LINC01854-201ENST00000375987 KIAA0232Q92628 1395 aa12.49□□□□□ -0.41
LINC01854-201ENST00000375987 RPAP1Q9BWH6 1393 aaPredicted RBP12.49□□□□□ -0.41
LINC01854-201ENST00000375987 TMEM2Q9UHN6 1383 aa12.49□□□□□ -0.41
LINC01854-201ENST00000375987 ATP2B3Q16720 1220 aa12.49□□□□□ -0.41
LINC01854-201ENST00000375987 SRCIN1Q9C0H9 1055 aa12.49□□□□□ -0.41
LINC01854-201ENST00000375987 EPB41L2O43491 1005 aaKnown RBP12.49□□□□□ -0.41
LINC01854-201ENST00000375987 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.49□□□□□ -0.41
LINC01854-201ENST00000375987 KIAA1524Q8TCG1 905 aa12.49□□□□□ -0.41
LINC01854-201ENST00000375987 UPF3BQ9BZI7 483 aaKnown RBP12.49□□□□□ -0.41
LINC01854-201ENST00000375987 ATP6V1DQ9Y5K8 247 aa12.49□□□□□ -0.41
LINC01854-201ENST00000375987 CHMLP26374 656 aa12.48□□□□□ -0.41
LINC01854-201ENST00000375987 PLCB2Q00722 1185 aa12.48□□□□□ -0.41
LINC01854-201ENST00000375987 DCTN1Q14203 1278 aa12.48□□□□□ -0.41
LINC01854-201ENST00000375987 KRT24Q2M2I5 525 aa12.48□□□□□ -0.41
LINC01854-201ENST00000375987 AATKQ6ZMQ8 1374 aa12.48□□□□□ -0.41
LINC01854-201ENST00000375987 ANKRD7Q92527 254 aa12.47□□□□□ -0.41
LINC01854-201ENST00000375987 LRRCC1Q9C099 1032 aa12.47□□□□□ -0.41
LINC01854-201ENST00000375987 CEP170BQ9Y4F5 1589 aaPredicted RBP12.47□□□□□ -0.41
LINC01854-201ENST00000375987 A0A0U1RQG5 324 aaPredicted RBP12.47□□□□□ -0.41
LINC01854-201ENST00000375987 FAM177BA6PVY3 158 aa12.47□□□□□ -0.41
LINC01854-201ENST00000375987 TRIM6-TRIM34B2RNG4 842 aa12.47□□□□□ -0.41
LINC01854-201ENST00000375987 RIOK3O14730 519 aaKnown RBP12.47□□□□□ -0.41
LINC01854-201ENST00000375987 ZSCAN22P10073 491 aaPredicted RBP12.47□□□□□ -0.41
LINC01854-201ENST00000375987 RILPL2Q969X0 211 aa12.47□□□□□ -0.41
LINC01854-201ENST00000375987 FEZ1Q99689 392 aa12.47□□□□□ -0.41
LINC01854-201ENST00000375987 STAG3Q9UJ98 1225 aa12.47□□□□□ -0.41
LINC01854-201ENST00000375987 CNPY2Q9Y2B0 182 aa12.47□□□□□ -0.41
LINC01854-201ENST00000375987 SALL3Q9BXA9 1300 aa12.47□□□□□ -0.41
LINC01854-201ENST00000375987 EDC4Q6P2E9 1401 aaKnown RBP12.46□□□□□ -0.41
LINC01854-201ENST00000375987 CCT4P50991 539 aaKnown RBP12.46□□□□□ -0.41
LINC01854-201ENST00000375987 CTIFO43310 598 aaKnown RBP12.46□□□□□ -0.42
LINC01854-201ENST00000375987 EXOC6BQ9Y2D4 811 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms