RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 ABCF2Q9UG63 623 aa16.13■□□□□ 0.17
C9orf47-203ENST00000375851 SMC2O95347 1197 aa16.12■□□□□ 0.17
C9orf47-203ENST00000375851 TXLNAP40222 546 aa16.12■□□□□ 0.17
C9orf47-203ENST00000375851 CCDC173Q0VFZ6 552 aa16.12■□□□□ 0.17
C9orf47-203ENST00000375851 IFNL2Q8IZJ0 200 aa16.12■□□□□ 0.17
C9orf47-203ENST00000375851 BMP2KLQ5H9B9 411 aa16.12■□□□□ 0.17
C9orf47-203ENST00000375851 ARHGAP45Q92619 1136 aa16.12■□□□□ 0.17
C9orf47-203ENST00000375851 POLKQ9UBT6 870 aa16.12■□□□□ 0.17
C9orf47-203ENST00000375851 R3HCC1Q9Y3T6 440 aaKnown RBP16.12■□□□□ 0.17
C9orf47-203ENST00000375851 GPS2Q13227 327 aa16.12■□□□□ 0.17
C9orf47-203ENST00000375851 SPATA32Q96LK8 384 aa16.12■□□□□ 0.17
C9orf47-203ENST00000375851 GRPEL1Q9HAV7 217 aa16.12■□□□□ 0.17
C9orf47-203ENST00000375851 IFIT1P09914 478 aaKnown RBP16.12■□□□□ 0.17
C9orf47-203ENST00000375851 PUS7Q96PZ0 661 aaKnown RBP16.12■□□□□ 0.17
C9orf47-203ENST00000375851 UBAC1Q9BSL1 405 aa16.12■□□□□ 0.17
C9orf47-203ENST00000375851 CARD14Q9BXL6 1004 aa16.12■□□□□ 0.17
C9orf47-203ENST00000375851 TTC21AQ8NDW8 1320 aa16.12■□□□□ 0.17
C9orf47-203ENST00000375851 IMMTQ16891 758 aaKnown RBP16.11■□□□□ 0.17
C9orf47-203ENST00000375851 ANKRD24Q8TF21 1146 aa16.11■□□□□ 0.17
C9orf47-203ENST00000375851 AIDAQ96BJ3 306 aa16.11■□□□□ 0.17
C9orf47-203ENST00000375851 TBC1D2Q9BYX2 928 aa16.11■□□□□ 0.17
C9orf47-203ENST00000375851 ANXA1P04083 346 aa16.11■□□□□ 0.17
C9orf47-203ENST00000375851 ATP2B2Q01814 1243 aa16.11■□□□□ 0.17
C9orf47-203ENST00000375851 DDX11Q96FC9 970 aa16.11■□□□□ 0.17
C9orf47-203ENST00000375851 PCDHB15Q9Y5E8 787 aa16.11■□□□□ 0.17
C9orf47-203ENST00000375851 CADPS2Q86UW7 1296 aa16.11■□□□□ 0.17
C9orf47-203ENST00000375851 MNS1Q8NEH6 495 aa16.11■□□□□ 0.17
C9orf47-203ENST00000375851 ZRANB1Q9UGI0 708 aa16.11■□□□□ 0.17
C9orf47-203ENST00000375851 CFAP45Q9UL16 551 aa16.11■□□□□ 0.17
C9orf47-203ENST00000375851 MAP3K2Q9Y2U5 619 aa16.11■□□□□ 0.17
C9orf47-203ENST00000375851 U3KPZ7 1027 aaPredicted RBP16.11■□□□□ 0.17
C9orf47-203ENST00000375851 POLR3AO14802 1390 aaPredicted RBP16.11■□□□□ 0.17
C9orf47-203ENST00000375851 CDKL5O76039 1030 aa16.11■□□□□ 0.17
C9orf47-203ENST00000375851 FERMT3Q86UX7 667 aa16.11■□□□□ 0.17
C9orf47-203ENST00000375851 IFIT5Q13325 482 aaKnown RBP16.1■□□□□ 0.17
C9orf47-203ENST00000375851 ABCC10Q5T3U5 1492 aa16.1■□□□□ 0.17
C9orf47-203ENST00000375851 PDIA4P13667 645 aaKnown RBP16.1■□□□□ 0.17
C9orf47-203ENST00000375851 CHRNA2Q15822 529 aa16.1■□□□□ 0.17
C9orf47-203ENST00000375851 CCDC83Q8IWF9 413 aa16.1■□□□□ 0.17
C9orf47-203ENST00000375851 RIMS2Q9UQ26 1411 aa16.1■□□□□ 0.17
C9orf47-203ENST00000375851 PER1O15534 1290 aaPredicted RBP16.1■□□□□ 0.17
C9orf47-203ENST00000375851 ADAMTS2O95450 1211 aa16.1■□□□□ 0.17
C9orf47-203ENST00000375851 PPP1R42Q7Z4L9 355 aa16.1■□□□□ 0.17
C9orf47-203ENST00000375851 ZBTB3Q9H5J0 574 aa16.1■□□□□ 0.17
C9orf47-203ENST00000375851 PPIP5K1Q6PFW1 1433 aa16.09■□□□□ 0.17
C9orf47-203ENST00000375851 TBC1D9Q6ZT07 1266 aa16.09■□□□□ 0.17
C9orf47-203ENST00000375851 ECHDC1Q9NTX5 307 aa16.09■□□□□ 0.17
C9orf47-203ENST00000375851 SPC24Q8NBT2 197 aa16.09■□□□□ 0.17
C9orf47-203ENST00000375851 OFD1O75665 1012 aa16.09■□□□□ 0.17
C9orf47-203ENST00000375851 ZNF652Q9Y2D9 606 aa16.08■□□□□ 0.17
C9orf47-203ENST00000375851 PIK3R4Q99570 1358 aa16.08■□□□□ 0.17
C9orf47-203ENST00000375851 NAP1L1P55209 391 aaKnown RBP16.08■□□□□ 0.17
C9orf47-203ENST00000375851 HDAC1Q13547 482 aaPredicted RBP16.08■□□□□ 0.17
C9orf47-203ENST00000375851 EIF4A2Q14240 407 aaKnown RBP16.08■□□□□ 0.17
C9orf47-203ENST00000375851 MPNDQ8N594 471 aa16.08■□□□□ 0.17
C9orf47-203ENST00000375851 CDK5RAP3Q96JB5 506 aa16.08■□□□□ 0.17
C9orf47-203ENST00000375851 TRMT112Q9UI30 125 aaKnown RBP16.08■□□□□ 0.17
C9orf47-203ENST00000375851 SHANK2Q9UPX8 1470 aa16.08■□□□□ 0.16
C9orf47-203ENST00000375851 C8orf58Q8NAV2 365 aa16.08■□□□□ 0.16
C9orf47-203ENST00000375851 MEIS3Q99687 375 aa16.08■□□□□ 0.16
C9orf47-203ENST00000375851 FILIP1LQ4L180 1135 aa16.08■□□□□ 0.16
C9orf47-203ENST00000375851 ATP5J2-PTCD1G3V325 749 aa16.07■□□□□ 0.16
C9orf47-203ENST00000375851 CFAP43Q8NDM7 1665 aa16.07■□□□□ 0.16
C9orf47-203ENST00000375851 EXOC5O00471 708 aa16.07■□□□□ 0.16
C9orf47-203ENST00000375851 HSP90AB3PQ58FF7 597 aa16.07■□□□□ 0.16
C9orf47-203ENST00000375851 UBE3BQ7Z3V4 1068 aa16.07■□□□□ 0.16
C9orf47-203ENST00000375851 BCL11BQ9C0K0 894 aaPredicted RBP16.07■□□□□ 0.16
C9orf47-203ENST00000375851 PHF23Q9BUL5 403 aaPredicted RBP16.06■□□□□ 0.16
C9orf47-203ENST00000375851 NUP62CLQ9H1M0 184 aa16.06■□□□□ 0.16
C9orf47-203ENST00000375851 BRPF1P55201 1214 aaPredicted RBP16.06■□□□□ 0.16
C9orf47-203ENST00000375851 PZPP20742 1482 aa16.06■□□□□ 0.16
C9orf47-203ENST00000375851 TEX14Q8IWB6 1497 aa16.06■□□□□ 0.16
C9orf47-203ENST00000375851 EPS15P42566 896 aa16.06■□□□□ 0.16
C9orf47-203ENST00000375851 GPTP24298 496 aa16.06■□□□□ 0.16
C9orf47-203ENST00000375851 TNNT3P45378 269 aaPredicted RBP16.06■□□□□ 0.16
C9orf47-203ENST00000375851 TSHZ3Q63HK5 1081 aa16.06■□□□□ 0.16
C9orf47-203ENST00000375851 DISP1Q96F81 1524 aa16.05■□□□□ 0.16
C9orf47-203ENST00000375851 SERPINC1P01008 464 aa16.05■□□□□ 0.16
C9orf47-203ENST00000375851 SNRPA1P09661 255 aaKnown RBP16.05■□□□□ 0.16
C9orf47-203ENST00000375851 SH2B1Q9NRF2 756 aaPredicted RBP16.05■□□□□ 0.16
C9orf47-203ENST00000375851 NOL7Q9UMY1 257 aaKnown RBP16.05■□□□□ 0.16
C9orf47-203ENST00000375851 TTC22Q5TAA0 569 aa16.04■□□□□ 0.16
C9orf47-203ENST00000375851 SOGA3Q5TF21 947 aa16.04■□□□□ 0.16
C9orf47-203ENST00000375851 ARHGEF12Q9NZN5 1544 aa16.04■□□□□ 0.16
C9orf47-203ENST00000375851 NUCB1Q02818 461 aa16.04■□□□□ 0.16
C9orf47-203ENST00000375851 EVI5LQ96CN4 794 aa16.04■□□□□ 0.16
C9orf47-203ENST00000375851 LIMCH1Q9UPQ0 1083 aa16.04■□□□□ 0.16
C9orf47-203ENST00000375851 PIP4K2AP48426 406 aaPredicted RBP16.04■□□□□ 0.16
C9orf47-203ENST00000375851 TBC1D32Q96NH3 1257 aa16.04■□□□□ 0.16
C9orf47-203ENST00000375851 PLEKHH1Q9ULM0 1364 aa16.03■□□□□ 0.16
C9orf47-203ENST00000375851 ANKRD13DQ6ZTN6 518 aa16.03■□□□□ 0.16
C9orf47-203ENST00000375851 ARGLU1Q9NWB6 273 aaPredicted RBP16.03■□□□□ 0.16
C9orf47-203ENST00000375851 MRPL50Q8N5N7 158 aaKnown RBP16.03■□□□□ 0.16
C9orf47-203ENST00000375851 IL27Q8NEV9 243 aa16.03■□□□□ 0.16
C9orf47-203ENST00000375851 NAPBQ9H115 298 aa16.03■□□□□ 0.16
C9orf47-203ENST00000375851 ZPR1O75312 459 aa16.03■□□□□ 0.16
C9orf47-203ENST00000375851 CAVIN4Q5BKX8 364 aa16.03■□□□□ 0.16
C9orf47-203ENST00000375851 TTLL5Q6EMB2 1281 aa16.03■□□□□ 0.16
C9orf47-203ENST00000375851 CHPF2Q9P2E5 772 aa16.03■□□□□ 0.16
C9orf47-203ENST00000375851 SYCE3A1L190 88 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms