RNA–Protein interactions for RNA: ENST00000375446.4

NINJ1-201, Transcript of ninjurin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NINJ1, Length 1,281 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-201ENST00000375446 SLC52A2Q9HAB3 445 aa29.03■■■□□ 2.24
NINJ1-201ENST00000375446 MAP3K5Q99683 1374 aa29.01■■■□□ 2.24
NINJ1-201ENST00000375446 GNAT3A8MTJ3 354 aa29.01■■■□□ 2.23
NINJ1-201ENST00000375446 ZBTB7AO95365 584 aa29.01■■■□□ 2.23
NINJ1-201ENST00000375446 PRKRIP1Q9H875 184 aaPredicted RBP29■■■□□ 2.23
NINJ1-201ENST00000375446 SCN11AQ9UI33 1791 aa29■■■□□ 2.23
NINJ1-201ENST00000375446 PNPLA7Q6ZV29 1317 aa28.99■■■□□ 2.23
NINJ1-201ENST00000375446 ATP6V1AP38606 617 aa28.99■■■□□ 2.23
NINJ1-201ENST00000375446 RBM42Q9BTD8 480 aaKnown RBP28.99■■■□□ 2.23
NINJ1-201ENST00000375446 ITPK1Q13572 414 aa28.98■■■□□ 2.23
NINJ1-201ENST00000375446 C5P01031 1676 aa28.98■■■□□ 2.23
NINJ1-201ENST00000375446 MRC1P22897 1456 aa28.97■■■□□ 2.23
NINJ1-201ENST00000375446 LINC00116Q8NCU8 138 aa28.97■■■□□ 2.23
NINJ1-201ENST00000375446 MTFR1LQ9H019 292 aa28.97■■■□□ 2.23
NINJ1-201ENST00000375446 IL17REQ8NFR9 667 aa28.96■■■□□ 2.23
NINJ1-201ENST00000375446 SLC4A9Q96Q91 983 aa28.96■■■□□ 2.23
NINJ1-201ENST00000375446 ATF5Q9Y2D1 282 aaPredicted RBP28.96■■■□□ 2.23
NINJ1-201ENST00000375446 ADAMTS7Q9UKP4 1686 aa28.96■■■□□ 2.23
NINJ1-201ENST00000375446 AK7Q96M32 723 aa28.95■■■□□ 2.22
NINJ1-201ENST00000375446 PTCD1O75127 700 aaKnown RBP28.94■■■□□ 2.22
NINJ1-201ENST00000375446 NEFMP07197 916 aa28.93■■■□□ 2.22
NINJ1-201ENST00000375446 SLC16A10Q8TF71 515 aa28.93■■■□□ 2.22
NINJ1-201ENST00000375446 TAF1LQ8IZX4 1826 aa28.92■■■□□ 2.22
NINJ1-201ENST00000375446 C4BP0C0L5 1744 aa28.92■■■□□ 2.22
NINJ1-201ENST00000375446 QSER1Q2KHR3 1735 aa28.92■■■□□ 2.22
NINJ1-201ENST00000375446 COL23A1Q86Y22 540 aaPredicted RBP28.92■■■□□ 2.22
NINJ1-201ENST00000375446 TEFQ10587 303 aa28.91■■■□□ 2.22
NINJ1-201ENST00000375446 PLEKHF1Q96S99 279 aa28.91■■■□□ 2.22
NINJ1-201ENST00000375446 PNNQ9H307 717 aaKnown RBP28.91■■■□□ 2.22
NINJ1-201ENST00000375446 MSH5O43196 834 aa28.9■■■□□ 2.22
NINJ1-201ENST00000375446 PTGER2P43116 358 aa28.9■■■□□ 2.22
NINJ1-201ENST00000375446 SLC39A6Q13433 755 aa28.9■■■□□ 2.22
NINJ1-201ENST00000375446 FLAD1Q8NFF5 587 aa28.9■■■□□ 2.22
NINJ1-201ENST00000375446 PPP1R1BQ9UD71 204 aaPredicted RBP28.9■■■□□ 2.22
NINJ1-201ENST00000375446 CEMIPQ8WUJ3 1361 aa28.89■■■□□ 2.22
NINJ1-201ENST00000375446 TUBGCP6Q96RT7 1819 aa28.89■■■□□ 2.22
NINJ1-201ENST00000375446 AMIGO3Q86WK7 504 aa28.88■■■□□ 2.21
NINJ1-201ENST00000375446 RTF1Q92541 710 aaKnown RBP28.88■■■□□ 2.21
NINJ1-201ENST00000375446 ZNF831Q5JPB2 1677 aa28.87■■■□□ 2.21
NINJ1-201ENST00000375446 GNPATO15228 680 aa28.86■■■□□ 2.21
NINJ1-201ENST00000375446 HTATSF1O43719 755 aaKnown RBP28.86■■■□□ 2.21
NINJ1-201ENST00000375446 SGIP1Q9BQI5 828 aa28.86■■■□□ 2.21
NINJ1-201ENST00000375446 MAPK8IP3Q9UPT6 1336 aa28.86■■■□□ 2.21
NINJ1-201ENST00000375446 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.85■■■□□ 2.21
NINJ1-201ENST00000375446 PHF14O94880 888 aa28.85■■■□□ 2.21
NINJ1-201ENST00000375446 SSFA2P28290 1259 aa28.85■■■□□ 2.21
NINJ1-201ENST00000375446 RC3H1Q5TC82 1133 aaKnown RBP28.85■■■□□ 2.21
NINJ1-201ENST00000375446 MCM10Q7L590 875 aa28.85■■■□□ 2.21
NINJ1-201ENST00000375446 SMIM5Q71RC9 77 aa28.84■■■□□ 2.21
NINJ1-201ENST00000375446 VIRMAQ69YN4 1812 aaKnown RBP28.84■■■□□ 2.21
NINJ1-201ENST00000375446 WDR43Q15061 677 aaKnown RBP eCLIP28.83■■■□□ 2.21
NINJ1-201ENST00000375446 NFE2L2Q16236 605 aa28.83■■■□□ 2.21
NINJ1-201ENST00000375446 TTC5Q8N0Z6 440 aa28.83■■■□□ 2.21
NINJ1-201ENST00000375446 CNTNAP4Q9C0A0 1308 aa28.83■■■□□ 2.21
NINJ1-201ENST00000375446 DCTN1Q14203 1278 aa28.82■■■□□ 2.2
NINJ1-201ENST00000375446 KCPQ6ZWJ8 1503 aa28.81■■■□□ 2.2
NINJ1-201ENST00000375446 ZNF790Q6PG37 636 aa28.8■■■□□ 2.2
NINJ1-201ENST00000375446 DNAJC10Q8IXB1 793 aa28.8■■■□□ 2.2
NINJ1-201ENST00000375446 RTCBQ9Y3I0 505 aaKnown RBP28.8■■■□□ 2.2
NINJ1-201ENST00000375446 UBR3Q6ZT12 1888 aa28.79■■■□□ 2.2
NINJ1-201ENST00000375446 POLD1P28340 1107 aa28.79■■■□□ 2.2
NINJ1-201ENST00000375446 COL5A3P25940 1745 aaPredicted RBP28.78■■■□□ 2.2
NINJ1-201ENST00000375446 BTBD11A6QL63 1104 aa28.78■■■□□ 2.2
NINJ1-201ENST00000375446 CRKLP46109 303 aaKnown RBP28.78■■■□□ 2.2
NINJ1-201ENST00000375446 VSIG10Q8N0Z9 540 aa28.78■■■□□ 2.2
NINJ1-201ENST00000375446 ARXQ96QS3 562 aa28.78■■■□□ 2.2
NINJ1-201ENST00000375446 RPS6KA4O75676 772 aa28.77■■■□□ 2.2
NINJ1-201ENST00000375446 MSL1Q68DK7 614 aa28.77■■■□□ 2.2
NINJ1-201ENST00000375446 ZNF496Q96IT1 587 aaPredicted RBP28.77■■■□□ 2.2
NINJ1-201ENST00000375446 CICQ96RK0 1608 aaPredicted RBP28.76■■■□□ 2.2
NINJ1-201ENST00000375446 SIPA1L3O60292 1781 aaPredicted RBP28.76■■■□□ 2.19
NINJ1-201ENST00000375446 ADAMTS8Q9UP79 889 aa28.76■■■□□ 2.19
NINJ1-201ENST00000375446 TJP1Q07157 1748 aa28.76■■■□□ 2.19
NINJ1-201ENST00000375446 TRAPPC3LQ5T215 181 aa28.75■■■□□ 2.19
NINJ1-201ENST00000375446 CCDC146Q8IYE0 955 aa28.75■■■□□ 2.19
NINJ1-201ENST00000375446 ANP32CO43423 234 aa28.74■■■□□ 2.19
NINJ1-201ENST00000375446 KCNQ3O43525 872 aa28.74■■■□□ 2.19
NINJ1-201ENST00000375446 CYP19A1P11511 503 aaPredicted RBP28.74■■■□□ 2.19
NINJ1-201ENST00000375446 ADRA2BP18089 450 aa28.74■■■□□ 2.19
NINJ1-201ENST00000375446 INTS5Q6P9B9 1019 aaKnown RBP28.74■■■□□ 2.19
NINJ1-201ENST00000375446 FMNL2Q96PY5 1086 aa28.73■■■□□ 2.19
NINJ1-201ENST00000375446 HEG1Q9ULI3 1381 aa28.73■■■□□ 2.19
NINJ1-201ENST00000375446 UBR2Q8IWV8 1755 aa28.73■■■□□ 2.19
NINJ1-201ENST00000375446 TAF7Q15545 349 aaPredicted RBP28.72■■■□□ 2.19
NINJ1-201ENST00000375446 RUNDC1Q96C34 613 aa28.72■■■□□ 2.19
NINJ1-201ENST00000375446 CCDC87Q9NVE4 849 aa28.72■■■□□ 2.19
NINJ1-201ENST00000375446 TMPOP42166 694 aaKnown RBP28.71■■■□□ 2.19
NINJ1-201ENST00000375446 RIPK4P57078 832 aa28.71■■■□□ 2.19
NINJ1-201ENST00000375446 ARHGEF1Q92888 912 aaKnown RBP28.71■■■□□ 2.19
NINJ1-201ENST00000375446 FHDC1Q9C0D6 1143 aaPredicted RBP28.71■■■□□ 2.19
NINJ1-201ENST00000375446 COL24A1Q17RW2 1714 aa28.71■■■□□ 2.19
NINJ1-201ENST00000375446 THUMPD2Q9BTF0 503 aaKnown RBP28.7■■■□□ 2.18
NINJ1-201ENST00000375446 MYH14Q7Z406 1995 aaKnown RBP28.7■■■□□ 2.18
NINJ1-201ENST00000375446 STARD3NLO95772 234 aa28.69■■■□□ 2.18
NINJ1-201ENST00000375446 RFC4P35249 363 aa28.69■■■□□ 2.18
NINJ1-201ENST00000375446 CCDC184Q52MB2 194 aa28.68■■■□□ 2.18
NINJ1-201ENST00000375446 TEX13AQ9BXU3 409 aaPredicted RBP28.68■■■□□ 2.18
NINJ1-201ENST00000375446 DLG5Q8TDM6 1919 aa28.67■■■□□ 2.18
NINJ1-201ENST00000375446 SYT17Q9BSW7 474 aa28.67■■■□□ 2.18
NINJ1-201ENST00000375446 RRP7AQ9Y3A4 280 aaKnown RBP28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms