RNA–Protein interactions for RNA: ENST00000375440.8

CUL4A-202, Transcript of cullin 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL4A, Length 2,364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-202ENST00000375440 FKBP5Q13451 457 aaPredicted RBP32.84■■■□□ 2.85
CUL4A-202ENST00000375440 HSPA2P54652 639 aa32.84■■■□□ 2.85
CUL4A-202ENST00000375440 EIF4A1P60842 406 aaKnown RBP32.83■■■□□ 2.85
CUL4A-202ENST00000375440 ZC3H6P61129 1189 aaKnown RBP32.82■■■□□ 2.84
CUL4A-202ENST00000375440 HDGFL1Q5TGJ6 251 aa32.82■■■□□ 2.84
CUL4A-202ENST00000375440 MPRIPQ6WCQ1 1025 aa32.81■■■□□ 2.84
CUL4A-202ENST00000375440 C22orf23Q9BZE7 217 aa32.81■■■□□ 2.84
CUL4A-202ENST00000375440 N4BP2Q86UW6 1770 aaPredicted RBP32.81■■■□□ 2.84
CUL4A-202ENST00000375440 ERBB3P21860 1342 aa32.81■■■□□ 2.84
CUL4A-202ENST00000375440 CADPS2Q86UW7 1296 aa32.8■■■□□ 2.84
CUL4A-202ENST00000375440 BECN1Q14457 450 aa32.79■■■□□ 2.84
CUL4A-202ENST00000375440 TEFQ10587 303 aa32.78■■■□□ 2.84
CUL4A-202ENST00000375440 RNMTO43148 476 aaKnown RBP32.78■■■□□ 2.84
CUL4A-202ENST00000375440 KCNQ3O43525 872 aa32.78■■■□□ 2.84
CUL4A-202ENST00000375440 PLEKHM2Q8IWE5 1019 aa32.78■■■□□ 2.84
CUL4A-202ENST00000375440 RTL5Q5HYW3 569 aaPredicted RBP32.77■■■□□ 2.84
CUL4A-202ENST00000375440 C1orf141Q5JVX7 400 aa32.77■■■□□ 2.84
CUL4A-202ENST00000375440 OVOS2A0A0G2JMS6 1433 aa32.77■■■□□ 2.84
CUL4A-202ENST00000375440 HOXB7P09629 217 aa32.76■■■□□ 2.84
CUL4A-202ENST00000375440 PXDNLA1KZ92 1463 aa32.76■■■□□ 2.83
CUL4A-202ENST00000375440 NPHP3Q7Z494 1330 aa32.75■■■□□ 2.83
CUL4A-202ENST00000375440 BTBD11A6QL63 1104 aa32.75■■■□□ 2.83
CUL4A-202ENST00000375440 GNAI2P04899 355 aa32.74■■■□□ 2.83
CUL4A-202ENST00000375440 PHAXQ9H814 394 aaKnown RBP32.74■■■□□ 2.83
CUL4A-202ENST00000375440 C16orf71Q8IYS4 520 aaPredicted RBP32.74■■■□□ 2.83
CUL4A-202ENST00000375440 XIRP1Q702N8 1843 aaKnown RBP32.73■■■□□ 2.83
CUL4A-202ENST00000375440 COL18A1P39060 1754 aa32.73■■■□□ 2.83
CUL4A-202ENST00000375440 HMMRO75330 724 aa32.73■■■□□ 2.83
CUL4A-202ENST00000375440 USP35Q9P2H5 1018 aa32.73■■■□□ 2.83
CUL4A-202ENST00000375440 TNS3Q68CZ2 1445 aa32.72■■■□□ 2.83
CUL4A-202ENST00000375440 GNAI3P08754 354 aa32.72■■■□□ 2.83
CUL4A-202ENST00000375440 GSPT1P15170 499 aaKnown RBP32.72■■■□□ 2.83
CUL4A-202ENST00000375440 EIF2S2P20042 333 aaKnown RBP32.72■■■□□ 2.83
CUL4A-202ENST00000375440 LMTK3Q96Q04 1460 aa32.71■■■□□ 2.83
CUL4A-202ENST00000375440 TBC1D2Q9BYX2 928 aa32.71■■■□□ 2.83
CUL4A-202ENST00000375440 CRYBG1Q9Y4K1 1723 aa32.71■■■□□ 2.83
CUL4A-202ENST00000375440 ADAMTS7Q9UKP4 1686 aa32.71■■■□□ 2.83
CUL4A-202ENST00000375440 SIPA1L3O60292 1781 aaPredicted RBP32.7■■■□□ 2.83
CUL4A-202ENST00000375440 TBC1D9Q6ZT07 1266 aa32.7■■■□□ 2.83
CUL4A-202ENST00000375440 SMARCA5O60264 1052 aaPredicted RBP32.69■■■□□ 2.82
CUL4A-202ENST00000375440 CABLES1Q8TDN4 633 aa32.69■■■□□ 2.82
CUL4A-202ENST00000375440 OTUD7AQ8TE49 926 aaPredicted RBP32.69■■■□□ 2.82
CUL4A-202ENST00000375440 CHPF2Q9P2E5 772 aa32.68■■■□□ 2.82
CUL4A-202ENST00000375440 RBM25P49756 843 aaKnown RBP32.68■■■□□ 2.82
CUL4A-202ENST00000375440 TTC22Q5TAA0 569 aa32.67■■■□□ 2.82
CUL4A-202ENST00000375440 APBB1O00213 710 aa32.67■■■□□ 2.82
CUL4A-202ENST00000375440 CHMP4AQ9BY43 222 aa32.67■■■□□ 2.82
CUL4A-202ENST00000375440 USP44Q9H0E7 712 aa32.66■■■□□ 2.82
CUL4A-202ENST00000375440 SPATA31A3Q5VYP0 1347 aa32.66■■■□□ 2.82
CUL4A-202ENST00000375440 BCL11AQ9H165 835 aa32.66■■■□□ 2.82
CUL4A-202ENST00000375440 NLRP2Q9NX02 1062 aa32.66■■■□□ 2.82
CUL4A-202ENST00000375440 NFKBIBQ15653 356 aa32.65■■■□□ 2.82
CUL4A-202ENST00000375440 HEG1Q9ULI3 1381 aa32.65■■■□□ 2.82
CUL4A-202ENST00000375440 STRCQ7RTU9 1775 aa32.63■■■□□ 2.81
CUL4A-202ENST00000375440 CDC45O75419 566 aa32.63■■■□□ 2.81
CUL4A-202ENST00000375440 RAPGEF4Q8WZA2 1011 aa32.63■■■□□ 2.81
CUL4A-202ENST00000375440 ATP8B2P98198 1209 aa32.62■■■□□ 2.81
CUL4A-202ENST00000375440 PNMA6EA0A0J9YXQ4 647 aa32.62■■■□□ 2.81
CUL4A-202ENST00000375440 LRRFIP2Q9Y608 721 aaKnown RBP32.61■■■□□ 2.81
CUL4A-202ENST00000375440 ABCC6O95255 1503 aa32.61■■■□□ 2.81
CUL4A-202ENST00000375440 GIGYF1O75420 1035 aaPredicted RBP32.61■■■□□ 2.81
CUL4A-202ENST00000375440 MEGF6O75095 1541 aa32.6■■■□□ 2.81
CUL4A-202ENST00000375440 CHRNA2Q15822 529 aa32.6■■■□□ 2.81
CUL4A-202ENST00000375440 ANXA1P04083 346 aa32.59■■■□□ 2.81
CUL4A-202ENST00000375440 BRINP3Q76B58 766 aa32.59■■■□□ 2.81
CUL4A-202ENST00000375440 EXOC6BQ9Y2D4 811 aa32.59■■■□□ 2.81
CUL4A-202ENST00000375440 SRCIN1Q9C0H9 1055 aa32.59■■■□□ 2.81
CUL4A-202ENST00000375440 SCN11AQ9UI33 1791 aa32.58■■■□□ 2.81
CUL4A-202ENST00000375440 UBTFL1P0CB47 393 aaPredicted RBP32.58■■■□□ 2.81
CUL4A-202ENST00000375440 ANTXR1Q9H6X2 564 aa32.58■■■□□ 2.81
CUL4A-202ENST00000375440 PI4KAP2A4QPH2 592 aa32.58■■■□□ 2.81
CUL4A-202ENST00000375440 PI4KAP1Q8N8J0 262 aa32.58■■■□□ 2.81
CUL4A-202ENST00000375440 DBF4Q9UBU7 674 aaPredicted RBP32.57■■■□□ 2.8
CUL4A-202ENST00000375440 KDM6AO15550 1401 aaPredicted RBP32.57■■■□□ 2.8
CUL4A-202ENST00000375440 CPDO75976 1380 aa32.57■■■□□ 2.8
CUL4A-202ENST00000375440 TATP17735 454 aaPredicted RBP32.56■■■□□ 2.8
CUL4A-202ENST00000375440 DEKP35659 375 aaKnown RBP32.56■■■□□ 2.8
CUL4A-202ENST00000375440 DNAAF4Q8WXU2 420 aa32.56■■■□□ 2.8
CUL4A-202ENST00000375440 ADCY9O60503 1353 aa32.56■■■□□ 2.8
CUL4A-202ENST00000375440 SLKQ9H2G2 1235 aaPredicted RBP32.56■■■□□ 2.8
CUL4A-202ENST00000375440 BEND3Q5T5X7 828 aa32.55■■■□□ 2.8
CUL4A-202ENST00000375440 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.55■■■□□ 2.85e-7■■■□□ 16.5
CUL4A-202ENST00000375440 CSB-PGBD3P0DP91 1061 aa32.55■■■□□ 2.8
CUL4A-202ENST00000375440 PRAMEF22A3QJZ6 481 aa32.54■■■□□ 2.8
CUL4A-202ENST00000375440 KDM4FA0A1W2PPD8 638 aa32.54■■■□□ 2.8
CUL4A-202ENST00000375440 PHKG2P15735 406 aa32.54■■■□□ 2.8
CUL4A-202ENST00000375440 SPG7Q9UQ90 795 aa32.54■■■□□ 2.8
CUL4A-202ENST00000375440 SDSP20132 328 aa32.53■■■□□ 2.8
CUL4A-202ENST00000375440 KIF2CQ99661 725 aa32.53■■■□□ 2.8
CUL4A-202ENST00000375440 OSBPL3Q9H4L5 887 aa32.53■■■□□ 2.8
CUL4A-202ENST00000375440 IBTKQ9P2D0 1353 aaPredicted RBP32.53■■■□□ 2.8
CUL4A-202ENST00000375440 PROSER3Q2NL68 480 aa32.53■■■□□ 2.8
CUL4A-202ENST00000375440 LRRCC1Q9C099 1032 aa32.51■■■□□ 2.8
CUL4A-202ENST00000375440 SLC52A2Q9HAB3 445 aa32.51■■■□□ 2.8
CUL4A-202ENST00000375440 SALL3Q9BXA9 1300 aa32.51■■■□□ 2.79
CUL4A-202ENST00000375440 PDE1AP54750 535 aa32.51■■■□□ 2.79
CUL4A-202ENST00000375440 PLEKHG2Q9H7P9 1386 aa32.5■■■□□ 2.79
CUL4A-202ENST00000375440 SSH3Q8TE77 659 aa32.5■■■□□ 2.79
CUL4A-202ENST00000375440 NBPF7P0C2Y1 421 aaPredicted RBP32.49■■■□□ 2.79
CUL4A-202ENST00000375440 ZNF335Q9H4Z2 1342 aaPredicted RBP32.48■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms