RNA–Protein interactions for RNA: ENST00000375128.4

XPA-201, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XPA, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-201ENST00000375128 TEFQ10587 303 aa28.67■■■□□ 2.18
XPA-201ENST00000375128 SENP3-EIF4A1A0A087X0R7 540 aa28.65■■■□□ 2.18
XPA-201ENST00000375128 EZH2Q15910 746 aaKnown RBP28.65■■■□□ 2.18
XPA-201ENST00000375128 LMOD3Q0VAK6 560 aa28.64■■■□□ 2.18
XPA-201ENST00000375128 CEMIPQ8WUJ3 1361 aa28.64■■■□□ 2.18
XPA-201ENST00000375128 CAMKK2Q96RR4 588 aa28.63■■■□□ 2.17
XPA-201ENST00000375128 MRC1P22897 1456 aa28.62■■■□□ 2.17
XPA-201ENST00000375128 ASAP1Q9ULH1 1129 aa28.62■■■□□ 2.17
XPA-201ENST00000375128 SMARCC1Q92922 1105 aaPredicted RBP28.61■■■□□ 2.17
XPA-201ENST00000375128 THUMPD2Q9BTF0 503 aaKnown RBP28.61■■■□□ 2.17
XPA-201ENST00000375128 ATG3Q9NT62 314 aa28.6■■■□□ 2.17
XPA-201ENST00000375128 PALLDQ8WX93 1383 aa28.6■■■□□ 2.17
XPA-201ENST00000375128 RGPD3A6NKT7 1758 aaPredicted RBP28.59■■■□□ 2.17
XPA-201ENST00000375128 RGPD4Q7Z3J3 1758 aa28.59■■■□□ 2.17
XPA-201ENST00000375128 TXNRD1Q16881 649 aa28.59■■■□□ 2.17
XPA-201ENST00000375128 TRIM35Q9UPQ4 493 aa28.59■■■□□ 2.17
XPA-201ENST00000375128 SIPA1L3O60292 1781 aaPredicted RBP28.57■■■□□ 2.16
XPA-201ENST00000375128 SLC39A6Q13433 755 aa28.57■■■□□ 2.16
XPA-201ENST00000375128 LY75O60449 1722 aa28.56■■■□□ 2.16
XPA-201ENST00000375128 BTBD11A6QL63 1104 aa28.56■■■□□ 2.16
XPA-201ENST00000375128 PROM2Q8N271 834 aa28.56■■■□□ 2.16
XPA-201ENST00000375128 SALL2Q9Y467 1007 aaPredicted RBP28.56■■■□□ 2.16
XPA-201ENST00000375128 TAF7Q15545 349 aaPredicted RBP28.54■■■□□ 2.16
XPA-201ENST00000375128 RBM42Q9BTD8 480 aaKnown RBP28.54■■■□□ 2.16
XPA-201ENST00000375128 CCNL1Q9UK58 526 aaPredicted RBP28.54■■■□□ 2.16
XPA-201ENST00000375128 KCNQ4P56696 695 aa28.52■■■□□ 2.16
XPA-201ENST00000375128 TTC5Q8N0Z6 440 aa28.52■■■□□ 2.16
XPA-201ENST00000375128 RREB1Q92766 1687 aa28.52■■■□□ 2.16
XPA-201ENST00000375128 PTCD1O75127 700 aaKnown RBP28.52■■■□□ 2.16
XPA-201ENST00000375128 SLC27A3Q5K4L6 730 aa28.52■■■□□ 2.16
XPA-201ENST00000375128 MIS18AQ9NYP9 233 aa28.52■■■□□ 2.16
XPA-201ENST00000375128 LOC102724428A0A0B4J2F2 783 aa28.51■■■□□ 2.15
XPA-201ENST00000375128 SIK1P57059 783 aa28.51■■■□□ 2.15
XPA-201ENST00000375128 PAPPAQ13219 1627 aa28.5■■■□□ 2.15
XPA-201ENST00000375128 ZNF790Q6PG37 636 aa28.5■■■□□ 2.15
XPA-201ENST00000375128 LRRC4BQ9NT99 713 aa28.5■■■□□ 2.15
XPA-201ENST00000375128 ATP6V1AP38606 617 aa28.49■■■□□ 2.15
XPA-201ENST00000375128 LAS1LQ9Y4W2 734 aaKnown RBP28.49■■■□□ 2.15
XPA-201ENST00000375128 NUP188Q5SRE5 1749 aa28.48■■■□□ 2.15
XPA-201ENST00000375128 KCNQ3O43525 872 aa28.47■■■□□ 2.15
XPA-201ENST00000375128 CCDC27Q2M243 656 aa28.47■■■□□ 2.15
XPA-201ENST00000375128 NCBP3Q53F19 620 aaKnown RBP28.46■■■□□ 2.15
XPA-201ENST00000375128 WWC1Q8IX03 1113 aa28.46■■■□□ 2.15
XPA-201ENST00000375128 CALD1Q05682 793 aaKnown RBP28.45■■■□□ 2.15
XPA-201ENST00000375128 NBPF14Q5TI25 921 aa28.44■■■□□ 2.14
XPA-201ENST00000375128 SLC4A9Q96Q91 983 aa28.44■■■□□ 2.14
XPA-201ENST00000375128 TSPYL4Q9UJ04 414 aa28.44■■■□□ 2.14
XPA-201ENST00000375128 UBR2Q8IWV8 1755 aa28.44■■■□□ 2.14
XPA-201ENST00000375128 KCPQ6ZWJ8 1503 aa28.43■■■□□ 2.14
XPA-201ENST00000375128 NGEFQ8N5V2 710 aa28.43■■■□□ 2.14
XPA-201ENST00000375128 ZNF496Q96IT1 587 aaPredicted RBP28.43■■■□□ 2.14
XPA-201ENST00000375128 FMNL2Q96PY5 1086 aa28.43■■■□□ 2.14
XPA-201ENST00000375128 KDM3BQ7LBC6 1761 aa28.42■■■□□ 2.14
XPA-201ENST00000375128 ITPK1Q13572 414 aa28.42■■■□□ 2.14
XPA-201ENST00000375128 TAF1LQ8IZX4 1826 aa28.42■■■□□ 2.14
XPA-201ENST00000375128 C5P01031 1676 aa28.41■■■□□ 2.14
XPA-201ENST00000375128 BABAM1Q9NWV8 329 aa28.41■■■□□ 2.14
XPA-201ENST00000375128 HMGB2P26583 209 aaKnown RBP28.4■■■□□ 2.14
XPA-201ENST00000375128 CFAP44Q96MT7 982 aa28.4■■■□□ 2.14
XPA-201ENST00000375128 STK32BQ9NY57 414 aa28.39■■■□□ 2.14
XPA-201ENST00000375128 ZNF831Q5JPB2 1677 aa28.39■■■□□ 2.13
XPA-201ENST00000375128 HEG1Q9ULI3 1381 aa28.38■■■□□ 2.13
XPA-201ENST00000375128 CHL1O00533 1208 aa28.38■■■□□ 2.13
XPA-201ENST00000375128 GNAI1P63096 354 aa28.38■■■□□ 2.13
XPA-201ENST00000375128 VSIG10Q8N0Z9 540 aa28.38■■■□□ 2.13
XPA-201ENST00000375128 LINC00116Q8NCU8 138 aa28.38■■■□□ 2.13
XPA-201ENST00000375128 DNAJC10Q8IXB1 793 aa28.37■■■□□ 2.13
XPA-201ENST00000375128 ANO8Q9HCE9 1232 aaPredicted RBP28.37■■■□□ 2.13
XPA-201ENST00000375128 IFT57Q9NWB7 429 aa28.37■■■□□ 2.13
XPA-201ENST00000375128 TJP1Q07157 1748 aa28.36■■■□□ 2.13
XPA-201ENST00000375128 EIF4A1P60842 406 aaKnown RBP28.35■■■□□ 2.13
XPA-201ENST00000375128 WDR63Q8IWG1 891 aa28.35■■■□□ 2.13
XPA-201ENST00000375128 ZNF853P0CG23 659 aa28.35■■■□□ 2.13
XPA-201ENST00000375128 SLC15A2Q16348 729 aa28.35■■■□□ 2.13
XPA-201ENST00000375128 ZNF827Q17R98 1081 aa28.35■■■□□ 2.13
XPA-201ENST00000375128 MBIPQ9NS73 344 aa28.35■■■□□ 2.13
XPA-201ENST00000375128 C4BP0C0L5 1744 aa28.34■■■□□ 2.13
XPA-201ENST00000375128 AKT1S1Q96B36 256 aa28.34■■■□□ 2.13
XPA-201ENST00000375128 COL5A3P25940 1745 aaPredicted RBP28.33■■■□□ 2.13
XPA-201ENST00000375128 SNRPA1P09661 255 aaKnown RBP28.33■■■□□ 2.13
XPA-201ENST00000375128 AK7Q96M32 723 aa28.33■■■□□ 2.13
XPA-201ENST00000375128 HNRNPUQ00839 825 aaKnown RBP eCLIP28.32■■■□□ 2.12
XPA-201ENST00000375128 R3HDM1Q15032 1099 aaKnown RBP28.32■■■□□ 2.12
XPA-201ENST00000375128 TEX13AQ9BXU3 409 aaPredicted RBP28.32■■■□□ 2.12
XPA-201ENST00000375128 TFCP2L1Q9NZI6 479 aa28.32■■■□□ 2.12
XPA-201ENST00000375128 IL16Q14005 1332 aa28.32■■■□□ 2.12
XPA-201ENST00000375128 CICQ96RK0 1608 aaPredicted RBP28.31■■■□□ 2.12
XPA-201ENST00000375128 PRAMEF22A3QJZ6 481 aa28.31■■■□□ 2.12
XPA-201ENST00000375128 PSDA5PKW4 1024 aaPredicted RBP28.31■■■□□ 2.12
XPA-201ENST00000375128 STARD3NLO95772 234 aa28.29■■■□□ 2.12
XPA-201ENST00000375128 CYP19A1P11511 503 aaPredicted RBP28.29■■■□□ 2.12
XPA-201ENST00000375128 ZNF521Q96K83 1311 aa28.28■■■□□ 2.12
XPA-201ENST00000375128 GIGYF1O75420 1035 aaPredicted RBP28.28■■■□□ 2.12
XPA-201ENST00000375128 CRKLP46109 303 aaKnown RBP28.28■■■□□ 2.12
XPA-201ENST00000375128 TSR2Q969E8 191 aaKnown RBP28.28■■■□□ 2.12
XPA-201ENST00000375128 USP16Q9Y5T5 823 aa28.28■■■□□ 2.12
XPA-201ENST00000375128 CNTNAP4Q9C0A0 1308 aa28.27■■■□□ 2.12
XPA-201ENST00000375128 GNPATO15228 680 aa28.27■■■□□ 2.12
XPA-201ENST00000375128 RC3H1Q5TC82 1133 aaKnown RBP28.27■■■□□ 2.12
XPA-201ENST00000375128 MYH14Q7Z406 1995 aaKnown RBP28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms