RNA–Protein interactions for RNA: ENST00000374607.5

PFDN6-202, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-202ENST00000374607 ITGB4P16144 1822 aa20■□□□□ 0.79
PFDN6-202ENST00000374607 TTC5Q8N0Z6 440 aa19.98■□□□□ 0.79
PFDN6-202ENST00000374607 PALLDQ8WX93 1383 aa19.97■□□□□ 0.79
PFDN6-202ENST00000374607 SENP3-EIF4A1A0A087X0R7 540 aa19.97■□□□□ 0.79
PFDN6-202ENST00000374607 BTBD11A6QL63 1104 aa19.97■□□□□ 0.79
PFDN6-202ENST00000374607 CAMKK2Q96RR4 588 aa19.97■□□□□ 0.79
PFDN6-202ENST00000374607 RBM42Q9BTD8 480 aaKnown RBP19.97■□□□□ 0.79
PFDN6-202ENST00000374607 ASAP1Q9ULH1 1129 aa19.97■□□□□ 0.79
PFDN6-202ENST00000374607 VIRMAQ69YN4 1812 aaKnown RBP19.97■□□□□ 0.79
PFDN6-202ENST00000374607 DLG5Q8TDM6 1919 aa19.96■□□□□ 0.79
PFDN6-202ENST00000374607 TXNRD1Q16881 649 aa19.96■□□□□ 0.79
PFDN6-202ENST00000374607 SALL2Q9Y467 1007 aaPredicted RBP19.96■□□□□ 0.79
PFDN6-202ENST00000374607 HMGB2P26583 209 aaKnown RBP19.95■□□□□ 0.78
PFDN6-202ENST00000374607 THUMPD2Q9BTF0 503 aaKnown RBP19.95■□□□□ 0.78
PFDN6-202ENST00000374607 ATG3Q9NT62 314 aa19.95■□□□□ 0.78
PFDN6-202ENST00000374607 CCNL1Q9UK58 526 aaPredicted RBP19.95■□□□□ 0.78
PFDN6-202ENST00000374607 CEMIPQ8WUJ3 1361 aa19.95■□□□□ 0.78
PFDN6-202ENST00000374607 PTCD1O75127 700 aaKnown RBP19.94■□□□□ 0.78
PFDN6-202ENST00000374607 TAF7Q15545 349 aaPredicted RBP19.94■□□□□ 0.78
PFDN6-202ENST00000374607 SLC27A3Q5K4L6 730 aa19.94■□□□□ 0.78
PFDN6-202ENST00000374607 NBPF14Q5TI25 921 aa19.94■□□□□ 0.78
PFDN6-202ENST00000374607 LAS1LQ9Y4W2 734 aaKnown RBP19.94■□□□□ 0.78
PFDN6-202ENST00000374607 CALD1Q05682 793 aaKnown RBP19.93■□□□□ 0.78
PFDN6-202ENST00000374607 SLC39A6Q13433 755 aa19.93■□□□□ 0.78
PFDN6-202ENST00000374607 MRC1P22897 1456 aa19.92■□□□□ 0.78
PFDN6-202ENST00000374607 ATP6V1AP38606 617 aa19.92■□□□□ 0.78
PFDN6-202ENST00000374607 ADAMTS7Q9UKP4 1686 aa19.91■□□□□ 0.78
PFDN6-202ENST00000374607 LOC102724428A0A0B4J2F2 783 aa19.91■□□□□ 0.78
PFDN6-202ENST00000374607 SIK1P57059 783 aa19.91■□□□□ 0.78
PFDN6-202ENST00000374607 TRIM35Q9UPQ4 493 aa19.91■□□□□ 0.78
PFDN6-202ENST00000374607 RGPD3A6NKT7 1758 aaPredicted RBP19.9■□□□□ 0.78
PFDN6-202ENST00000374607 RGPD4Q7Z3J3 1758 aa19.9■□□□□ 0.78
PFDN6-202ENST00000374607 KCNQ4P56696 695 aa19.9■□□□□ 0.78
PFDN6-202ENST00000374607 ZNF790Q6PG37 636 aa19.9■□□□□ 0.78
PFDN6-202ENST00000374607 PROM2Q8N271 834 aa19.89■□□□□ 0.77
PFDN6-202ENST00000374607 MIS18AQ9NYP9 233 aa19.89■□□□□ 0.77
PFDN6-202ENST00000374607 TSPYL4Q9UJ04 414 aa19.89■□□□□ 0.77
PFDN6-202ENST00000374607 STK32BQ9NY57 414 aa19.88■□□□□ 0.77
PFDN6-202ENST00000374607 NGEFQ8N5V2 710 aa19.87■□□□□ 0.77
PFDN6-202ENST00000374607 FMNL2Q96PY5 1086 aa19.87■□□□□ 0.77
PFDN6-202ENST00000374607 LY75O60449 1722 aa19.86■□□□□ 0.77
PFDN6-202ENST00000374607 CCDC27Q2M243 656 aa19.86■□□□□ 0.77
PFDN6-202ENST00000374607 LRRC4BQ9NT99 713 aa19.86■□□□□ 0.77
PFDN6-202ENST00000374607 SIPA1L3O60292 1781 aaPredicted RBP19.85■□□□□ 0.77
PFDN6-202ENST00000374607 RREB1Q92766 1687 aa19.84■□□□□ 0.77
PFDN6-202ENST00000374607 PSDA5PKW4 1024 aaPredicted RBP19.84■□□□□ 0.77
PFDN6-202ENST00000374607 GNAI1P63096 354 aa19.84■□□□□ 0.77
PFDN6-202ENST00000374607 NCBP3Q53F19 620 aaKnown RBP19.84■□□□□ 0.77
PFDN6-202ENST00000374607 WWC1Q8IX03 1113 aa19.84■□□□□ 0.77
PFDN6-202ENST00000374607 AK7Q96M32 723 aa19.84■□□□□ 0.77
PFDN6-202ENST00000374607 BABAM1Q9NWV8 329 aa19.84■□□□□ 0.77
PFDN6-202ENST00000374607 KCNQ3O43525 872 aa19.83■□□□□ 0.77
PFDN6-202ENST00000374607 ZNF496Q96IT1 587 aaPredicted RBP19.83■□□□□ 0.77
PFDN6-202ENST00000374607 VSIG10Q8N0Z9 540 aa19.82■□□□□ 0.76
PFDN6-202ENST00000374607 CFAP44Q96MT7 982 aa19.82■□□□□ 0.76
PFDN6-202ENST00000374607 TEX13AQ9BXU3 409 aaPredicted RBP19.82■□□□□ 0.76
PFDN6-202ENST00000374607 TFCP2L1Q9NZI6 479 aa19.82■□□□□ 0.76
PFDN6-202ENST00000374607 NUP188Q5SRE5 1749 aa19.82■□□□□ 0.76
PFDN6-202ENST00000374607 PAPPAQ13219 1627 aa19.81■□□□□ 0.76
PFDN6-202ENST00000374607 STARD3NLO95772 234 aa19.81■□□□□ 0.76
PFDN6-202ENST00000374607 R3HDM1Q15032 1099 aaKnown RBP19.81■□□□□ 0.76
PFDN6-202ENST00000374607 IFT57Q9NWB7 429 aa19.81■□□□□ 0.76
PFDN6-202ENST00000374607 SRCAPQ6ZRS2 3230 aa19.81■□□□□ 0.76
PFDN6-202ENST00000374607 HEG1Q9ULI3 1381 aa19.81■□□□□ 0.76
PFDN6-202ENST00000374607 SNRPA1P09661 255 aaKnown RBP19.8■□□□□ 0.76
PFDN6-202ENST00000374607 ITPK1Q13572 414 aa19.8■□□□□ 0.76
PFDN6-202ENST00000374607 SLC15A2Q16348 729 aa19.8■□□□□ 0.76
PFDN6-202ENST00000374607 WDR63Q8IWG1 891 aa19.8■□□□□ 0.76
PFDN6-202ENST00000374607 DNAJC10Q8IXB1 793 aa19.8■□□□□ 0.76
PFDN6-202ENST00000374607 LINC00116Q8NCU8 138 aa19.8■□□□□ 0.76
PFDN6-202ENST00000374607 C5P01031 1676 aa19.79■□□□□ 0.76
PFDN6-202ENST00000374607 MSH5O43196 834 aa19.79■□□□□ 0.76
PFDN6-202ENST00000374607 HNRNPUQ00839 825 aaKnown RBP eCLIP19.79■□□□□ 0.76
PFDN6-202ENST00000374607 SLC4A9Q96Q91 983 aa19.79■□□□□ 0.76
PFDN6-202ENST00000374607 KCPQ6ZWJ8 1503 aa19.79■□□□□ 0.76
PFDN6-202ENST00000374607 CHL1O00533 1208 aa19.78■□□□□ 0.76
PFDN6-202ENST00000374607 EIF4A1P60842 406 aaKnown RBP19.78■□□□□ 0.76
PFDN6-202ENST00000374607 NPM2Q86SE8 214 aaKnown RBP19.78■□□□□ 0.76
PFDN6-202ENST00000374607 GNPATO15228 680 aa19.77■□□□□ 0.76
PFDN6-202ENST00000374607 ANO8Q9HCE9 1232 aaPredicted RBP19.77■□□□□ 0.76
PFDN6-202ENST00000374607 MBIPQ9NS73 344 aa19.77■□□□□ 0.76
PFDN6-202ENST00000374607 IL16Q14005 1332 aa19.76■□□□□ 0.75
PFDN6-202ENST00000374607 UBR2Q8IWV8 1755 aa19.76■□□□□ 0.75
PFDN6-202ENST00000374607 CRKLP46109 303 aaKnown RBP19.76■□□□□ 0.75
PFDN6-202ENST00000374607 ZNF827Q17R98 1081 aa19.76■□□□□ 0.75
PFDN6-202ENST00000374607 RTCBQ9Y3I0 505 aaKnown RBP19.76■□□□□ 0.75
PFDN6-202ENST00000374607 KDM3BQ7LBC6 1761 aa19.75■□□□□ 0.75
PFDN6-202ENST00000374607 PHF14O94880 888 aa19.75■□□□□ 0.75
PFDN6-202ENST00000374607 AKT1S1Q96B36 256 aa19.75■□□□□ 0.75
PFDN6-202ENST00000374607 MYH16Q9H6N6 1097 aa19.75■□□□□ 0.75
PFDN6-202ENST00000374607 C4BP0C0L5 1744 aa19.75■□□□□ 0.75
PFDN6-202ENST00000374607 ZNF831Q5JPB2 1677 aa19.75■□□□□ 0.75
PFDN6-202ENST00000374607 TAF1LQ8IZX4 1826 aa19.74■□□□□ 0.75
PFDN6-202ENST00000374607 GOLGA2Q08379 1002 aa19.74■□□□□ 0.75
PFDN6-202ENST00000374607 RC3H1Q5TC82 1133 aaKnown RBP19.74■□□□□ 0.75
PFDN6-202ENST00000374607 FLAD1Q8NFF5 587 aa19.74■□□□□ 0.75
PFDN6-202ENST00000374607 CCDC87Q9NVE4 849 aa19.74■□□□□ 0.75
PFDN6-202ENST00000374607 ZNF330Q9Y3S2 320 aaPredicted RBP19.74■□□□□ 0.75
PFDN6-202ENST00000374607 CNTNAP4Q9C0A0 1308 aa19.74■□□□□ 0.75
PFDN6-202ENST00000374607 GIGYF1O75420 1035 aaPredicted RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms