RNA–Protein interactions for RNA: ENST00000373703.4

PEF1-201, Transcript of penta-EF-hand domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PEF1, Length 1,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEF1-201ENST00000373703 NCBP3Q53F19 620 aaKnown RBP19.36■□□□□ 0.69
PEF1-201ENST00000373703 UPF1Q92900 1129 aaKnown RBP eCLIP19.36■□□□□ 0.693e-7■■■■■ 30
PEF1-201ENST00000373703 HNRNPUQ00839 825 aaKnown RBP eCLIP19.35■□□□□ 0.69
PEF1-201ENST00000373703 SF3B2Q13435 895 aaKnown RBP19.35■□□□□ 0.69
PEF1-201ENST00000373703 TAF7Q15545 349 aaPredicted RBP19.35■□□□□ 0.69
PEF1-201ENST00000373703 MIS18AQ9NYP9 233 aa19.35■□□□□ 0.69
PEF1-201ENST00000373703 ASAP1Q9ULH1 1129 aa19.35■□□□□ 0.69
PEF1-201ENST00000373703 BTBD11A6QL63 1104 aa19.34■□□□□ 0.69
PEF1-201ENST00000373703 SLC39A6Q13433 755 aa19.34■□□□□ 0.69
PEF1-201ENST00000373703 NGEFQ8N5V2 710 aa19.33■□□□□ 0.69
PEF1-201ENST00000373703 ATG3Q9NT62 314 aa19.33■□□□□ 0.69
PEF1-201ENST00000373703 LAS1LQ9Y4W2 734 aaKnown RBP19.33■□□□□ 0.69
PEF1-201ENST00000373703 BTAF1O14981 1849 aa19.33■□□□□ 0.68
PEF1-201ENST00000373703 CCDC125Q86Z20 511 aa19.33■□□□□ 0.68
PEF1-201ENST00000373703 TNS1Q9HBL0 1735 aaKnown RBP19.32■□□□□ 0.68
PEF1-201ENST00000373703 KCNQ3O43525 872 aa19.31■□□□□ 0.68
PEF1-201ENST00000373703 CALD1Q05682 793 aaKnown RBP19.31■□□□□ 0.68
PEF1-201ENST00000373703 SIPA1L3O60292 1781 aaPredicted RBP19.3■□□□□ 0.68
PEF1-201ENST00000373703 DEFB132Q7Z7B7 95 aa19.3■□□□□ 0.68
PEF1-201ENST00000373703 PALLDQ8WX93 1383 aa19.29■□□□□ 0.68
PEF1-201ENST00000373703 EN1Q05925 392 aaPredicted RBP19.29■□□□□ 0.68
PEF1-201ENST00000373703 ZNF790Q6PG37 636 aa19.29■□□□□ 0.68
PEF1-201ENST00000373703 WDR63Q8IWG1 891 aa19.29■□□□□ 0.68
PEF1-201ENST00000373703 TTC5Q8N0Z6 440 aa19.29■□□□□ 0.68
PEF1-201ENST00000373703 SMARCC1Q92922 1105 aaPredicted RBP19.29■□□□□ 0.68
PEF1-201ENST00000373703 TSPYL4Q9UJ04 414 aa19.29■□□□□ 0.68
PEF1-201ENST00000373703 ZNF521Q96K83 1311 aa19.29■□□□□ 0.68
PEF1-201ENST00000373703 PLSCR1O15162 318 aa19.29■□□□□ 0.68
PEF1-201ENST00000373703 PTCD1O75127 700 aaKnown RBP19.29■□□□□ 0.68
PEF1-201ENST00000373703 BAG6P46379 1132 aa19.29■□□□□ 0.68
PEF1-201ENST00000373703 CFAP44Q96MT7 982 aa19.29■□□□□ 0.68
PEF1-201ENST00000373703 CHL1O00533 1208 aa19.28■□□□□ 0.68
PEF1-201ENST00000373703 RBM42Q9BTD8 480 aaKnown RBP19.28■□□□□ 0.68
PEF1-201ENST00000373703 IFT57Q9NWB7 429 aa19.27■□□□□ 0.68
PEF1-201ENST00000373703 ZNF853P0CG23 659 aa19.26■□□□□ 0.67
PEF1-201ENST00000373703 KCNQ4P56696 695 aa19.26■□□□□ 0.67
PEF1-201ENST00000373703 GNAI1P63096 354 aa19.26■□□□□ 0.67
PEF1-201ENST00000373703 EZH2Q15910 746 aaKnown RBP19.26■□□□□ 0.67
PEF1-201ENST00000373703 YTHDC1Q96MU7 727 aaKnown RBP19.26■□□□□ 0.67
PEF1-201ENST00000373703 SPINK5Q9NQ38 1064 aaPredicted RBP19.26■□□□□ 0.67
PEF1-201ENST00000373703 PROM2Q8N271 834 aa19.25■□□□□ 0.67
PEF1-201ENST00000373703 ZNF496Q96IT1 587 aaPredicted RBP19.25■□□□□ 0.67
PEF1-201ENST00000373703 CAMKK2Q96RR4 588 aa19.25■□□□□ 0.67
PEF1-201ENST00000373703 MBIPQ9NS73 344 aa19.25■□□□□ 0.67
PEF1-201ENST00000373703 BABAM1Q9NWV8 329 aa19.25■□□□□ 0.67
PEF1-201ENST00000373703 PAPPAQ13219 1627 aa19.25■□□□□ 0.67
PEF1-201ENST00000373703 LOC102724428A0A0B4J2F2 783 aa19.25■□□□□ 0.67
PEF1-201ENST00000373703 SIK1P57059 783 aa19.25■□□□□ 0.67
PEF1-201ENST00000373703 TXNRD1Q16881 649 aa19.25■□□□□ 0.67
PEF1-201ENST00000373703 IL16Q14005 1332 aa19.25■□□□□ 0.67
PEF1-201ENST00000373703 GOLGA2Q08379 1002 aa19.24■□□□□ 0.67
PEF1-201ENST00000373703 TSR2Q969E8 191 aaKnown RBP19.24■□□□□ 0.67
PEF1-201ENST00000373703 SLC4A9Q96Q91 983 aa19.24■□□□□ 0.67
PEF1-201ENST00000373703 CCNL1Q9UK58 526 aaPredicted RBP19.24■□□□□ 0.67
PEF1-201ENST00000373703 KCPQ6ZWJ8 1503 aa19.23■□□□□ 0.67
PEF1-201ENST00000373703 ATP6V1AP38606 617 aa19.23■□□□□ 0.67
PEF1-201ENST00000373703 CDCA7LQ96GN5 454 aa19.23■□□□□ 0.67
PEF1-201ENST00000373703 FMNL2Q96PY5 1086 aa19.23■□□□□ 0.67
PEF1-201ENST00000373703 KDM3BQ7LBC6 1761 aa19.22■□□□□ 0.67
PEF1-201ENST00000373703 EIF4A1P60842 406 aaKnown RBP19.22■□□□□ 0.67
PEF1-201ENST00000373703 LRRC4BQ9NT99 713 aa19.22■□□□□ 0.67
PEF1-201ENST00000373703 ZBED9Q6R2W3 1325 aa19.21■□□□□ 0.67
PEF1-201ENST00000373703 LY75O60449 1722 aa19.21■□□□□ 0.67
PEF1-201ENST00000373703 HEG1Q9ULI3 1381 aa19.2■□□□□ 0.66
PEF1-201ENST00000373703 FANCIQ9NVI1 1328 aa19.2■□□□□ 0.66
PEF1-201ENST00000373703 PRAMEF22A3QJZ6 481 aa19.2■□□□□ 0.66
PEF1-201ENST00000373703 SOCS7O14512 581 aa19.2■□□□□ 0.66
PEF1-201ENST00000373703 ITPK1Q13572 414 aa19.2■□□□□ 0.66
PEF1-201ENST00000373703 KRT24Q2M2I5 525 aa19.2■□□□□ 0.66
PEF1-201ENST00000373703 SLC27A3Q5K4L6 730 aa19.2■□□□□ 0.66
PEF1-201ENST00000373703 UBR2Q8IWV8 1755 aa19.2■□□□□ 0.66
PEF1-201ENST00000373703 MYH16Q9H6N6 1097 aa19.19■□□□□ 0.66
PEF1-201ENST00000373703 E9PSI1 815 aa19.18■□□□□ 0.66
PEF1-201ENST00000373703 SLFN5Q08AF3 891 aa19.18■□□□□ 0.66
PEF1-201ENST00000373703 DNAJC10Q8IXB1 793 aa19.18■□□□□ 0.66
PEF1-201ENST00000373703 VSIG10Q8N0Z9 540 aa19.18■□□□□ 0.66
PEF1-201ENST00000373703 RGPD3A6NKT7 1758 aaPredicted RBP19.18■□□□□ 0.66
PEF1-201ENST00000373703 RGPD4Q7Z3J3 1758 aa19.18■□□□□ 0.66
PEF1-201ENST00000373703 SNRPA1P09661 255 aaKnown RBP19.18■□□□□ 0.66
PEF1-201ENST00000373703 GIGYF1O75420 1035 aaPredicted RBP19.17■□□□□ 0.66
PEF1-201ENST00000373703 LINC00116Q8NCU8 138 aa19.17■□□□□ 0.66
PEF1-201ENST00000373703 ELL2O00472 640 aaPredicted RBP19.16■□□□□ 0.66
PEF1-201ENST00000373703 C8orf58Q8NAV2 365 aa19.16■□□□□ 0.66
PEF1-201ENST00000373703 USP16Q9Y5T5 823 aa19.16■□□□□ 0.66
PEF1-201ENST00000373703 EXOSC9Q06265 439 aaKnown RBP19.14■□□□□ 0.66
PEF1-201ENST00000373703 DUSP27Q5VZP5 1158 aa19.14■□□□□ 0.66
PEF1-201ENST00000373703 TJP1Q07157 1748 aa19.14■□□□□ 0.65
PEF1-201ENST00000373703 TRMT2AQ8IZ69 625 aaKnown RBP19.14■□□□□ 0.65
PEF1-201ENST00000373703 TSPYL6Q8N831 410 aa19.14■□□□□ 0.65
PEF1-201ENST00000373703 TEX13AQ9BXU3 409 aaPredicted RBP19.14■□□□□ 0.65
PEF1-201ENST00000373703 RREB1Q92766 1687 aa19.13■□□□□ 0.65
PEF1-201ENST00000373703 CYP19A1P11511 503 aaPredicted RBP19.13■□□□□ 0.65
PEF1-201ENST00000373703 ZNF831Q5JPB2 1677 aa19.12■□□□□ 0.65
PEF1-201ENST00000373703 STARD3NLO95772 234 aa19.12■□□□□ 0.65
PEF1-201ENST00000373703 EIF2S2P20042 333 aaKnown RBP19.12■□□□□ 0.65
PEF1-201ENST00000373703 CRKLP46109 303 aaKnown RBP19.11■□□□□ 0.65
PEF1-201ENST00000373703 NECTIN2Q92692 538 aa19.11■□□□□ 0.65
PEF1-201ENST00000373703 C5P01031 1676 aa19.11■□□□□ 0.65
PEF1-201ENST00000373703 A1BGP04217 495 aa19.11■□□□□ 0.65
PEF1-201ENST00000373703 ZNF827Q17R98 1081 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms